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1.
Food Microbiol ; 96: 103724, 2021 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-33494897

RESUMEN

Proteus mirabilis is an important pathogen involved in human urinary tract infections, and also more isolated from stools of patients with diarrheal disease than from healthy patients. The role of food, especially poultry products as source for human infection and multi-resistant strains remains unclear. As a resident in broilers' intestines, P. mirabilis can contaminate broiler carcasses due to slaughter practices, and be a risk for human infection. The present study evaluated the performance of five isolation media, and subsequently examined the presence of P. mirabilis on broiler carcasses at retail. Additionally, isolates were characterized by the Dienes' test, repetitive element PCR fingerprinting and pulsed-field gel electrophoresis, and their antibiotic resistance profile determined. Using a combined isolation protocol on blood agar, xylose lysine deoxycholate agar and violet red bile glucose agar, P. mirabilis was isolated from 29 out of 80 broiler carcasses (36.25%) with a mean contamination level of 2.25 ± 0.50 log10 CFU/g. A high strain heterogeneity was present in isolates from broilers and human stool. The same strains were not shared, but the antibiotic resistance profiling was similar. A role of poultry products as source for human infection should be taken into account.


Asunto(s)
Antibacterianos/farmacología , Farmacorresistencia Bacteriana , Heces/microbiología , Carne/microbiología , Enfermedades de las Aves de Corral/microbiología , Infecciones por Proteus/microbiología , Infecciones por Proteus/veterinaria , Proteus mirabilis/aislamiento & purificación , Animales , Bélgica , Pollos , Humanos , Proteus mirabilis/clasificación , Proteus mirabilis/efectos de los fármacos , Proteus mirabilis/genética
2.
Infect Immun ; 85(2)2017 02.
Artículo en Inglés | MEDLINE | ID: mdl-27895127

RESUMEN

Urinary catheter use is prevalent in health care settings, and polymicrobial colonization by urease-positive organisms, such as Proteus mirabilis and Providencia stuartii, commonly occurs with long-term catheterization. We previously demonstrated that coinfection with P. mirabilis and P. stuartii increased overall urease activity in vitro and disease severity in a model of urinary tract infection (UTI). In this study, we expanded these findings to a murine model of catheter-associated UTI (CAUTI), delineated the contribution of enhanced urease activity to coinfection pathogenesis, and screened for enhanced urease activity with other common CAUTI pathogens. In the UTI model, mice coinfected with the two species exhibited higher urine pH values, urolithiasis, bacteremia, and more pronounced tissue damage and inflammation compared to the findings for mice infected with a single species, despite having a similar bacterial burden within the urinary tract. The presence of P. stuartii, regardless of urease production by this organism, was sufficient to enhance P. mirabilis urease activity and increase disease severity, and enhanced urease activity was the predominant factor driving tissue damage and the dissemination of both organisms to the bloodstream during coinfection. These findings were largely recapitulated in the CAUTI model. Other uropathogens also enhanced P. mirabilis urease activity in vitro, including recent clinical isolates of Escherichia coli, Enterococcus faecalis, Klebsiella pneumoniae, and Pseudomonas aeruginosa We therefore conclude that the underlying mechanism of enhanced urease activity may represent a widespread target for limiting the detrimental consequences of polymicrobial catheter colonization, particularly by P. mirabilis and other urease-positive bacteria.


Asunto(s)
Coinfección , Interacciones Huésped-Patógeno , Proteus mirabilis , Simbiosis , Infecciones Urinarias/microbiología , Animales , Bacteriemia/microbiología , Carga Bacteriana , Modelos Animales de Enfermedad , Femenino , Genoma Bacteriano , Genómica , Secuenciación de Nucleótidos de Alto Rendimiento , Humanos , Inmunidad Innata , Ratones , Mutación , Proteus mirabilis/clasificación , Proteus mirabilis/enzimología , Proteus mirabilis/genética , Ureasa/metabolismo , Cateterismo Urinario/efectos adversos , Infecciones Urinarias/patología , Urolitiasis/etiología
3.
Int J Mol Sci ; 18(2)2017 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-28212280

RESUMEN

Urinary tract infections (UTIs) and catheter-associated UTIs (CAUTIs) are the principal hospital-acquired infections. Proteus mirabilis is characterized by several virulence factors able to promote adhesion and biofilm formation and ameliorate the colonization of urinary tract and the formation of crystalline biofilms on the abiotic surface of the urinary catheters. Since, to date, the role of P. mirabilis in the etiopathogenesis of different types of urinary tract infections is not well established, in this study we sought to characterize two different clinically isolated strains of P. mirabilis (PM1 and PM2) with distinctive phenotypes and analyzed various virulence factors possibly implicated in the ability to induce UTIs and CAUTIs. In particular, we analyzed motility, biofilm formation both on abiotic and biotic surfaces of PM1 and PM2 and paralleled these parameters with the ability to induce an inflammatory response in an epithelial cell model. Results showed that PM1 displayed major motility and a capacity to form biofilm and was associated with an anti-inflammatory response of host cells. Conversely, PM2 exhibited lack motility and a had slower organization in biofilm but promoted an increase of proinflammatory cytokine expression in infected epithelial cells. Our study provides data useful to start uncovering the pathologic basis of P. mirabilis-associated urinary infections. The evidence of different virulence factors expressed by PM1 and PM2 highlights the possibility to use precise and personalized therapies targeting specific virulence pathways.


Asunto(s)
Biopelículas/crecimiento & desarrollo , Inmunomodulación , Infecciones por Proteus/inmunología , Infecciones por Proteus/microbiología , Proteus mirabilis/fisiología , Regulación Bacteriana de la Expresión Génica , Genes Bacterianos , Interacciones Huésped-Patógeno/inmunología , Humanos , Fenotipo , Proteus mirabilis/clasificación , Proteus mirabilis/aislamiento & purificación , Infecciones Urinarias/inmunología , Infecciones Urinarias/microbiología , Factores de Virulencia
4.
Microbiology (Reading) ; 162(5): 789-797, 2016 05.
Artículo en Inglés | MEDLINE | ID: mdl-26959528

RESUMEN

A hospitalized 73-year-old woman was infected with a Proteus mirabilis strain, 12 B-r, isolated from the place of injection of a blood catheter. Another strain, 12 B-k, recognized as Proteus genomospecies 5 or 6, was isolated from the patient's faeces, which was an example of a nosocomial infection rather than an auto-infection. Serological investigation using ELISA and Western blotting showed that strain 12 B-k from faeces belonged to the Proteus O2 serogroup. Strain 12 B-r from the wound displayed cross-reactions with several Proteus O serogroups due to common epitopes on the core or O-specific parts of the lipopolysaccharide. Studies of the isolated 12 B-r O-specific polysaccharide by NMR spectroscopy revealed its close structural similarity to that of Proteus O8. The only difference in 12 B-r was the presence of an additional GlcNAc-linked phosphoethanolamine residue, which creates a putative epitope responsible for the cross-reactivity with Pt. mirabilis O16. The new O-antigen form could appear as a result of adaptation of the bacterium to a changing environment. On the basis of the data obtained, we suggest division of the O8 serogroup into two subgroups: O8a for strains of various Proteus species that have been previously classified into the O8 serogroup, and O8a,b for Pt. mirabilis 12 B-r, where 'a' is a common epitope and 'b' is a phosphoethanolamine-associated epitope. These findings further confirm serological and structural heterogeneity of O antigens of Proteus strains isolated lately from patients in Poland.


Asunto(s)
Antígenos O/química , Antígenos O/inmunología , Infecciones por Proteus/microbiología , Proteus mirabilis/inmunología , Anciano , Técnicas de Tipificación Bacteriana , Infecciones Relacionadas con Catéteres/microbiología , Infección Hospitalaria/microbiología , Ensayo de Inmunoadsorción Enzimática , Etanolaminas/química , Heces/microbiología , Femenino , Humanos , Lipopolisacáridos/inmunología , Espectroscopía de Resonancia Magnética , Polonia , Proteus mirabilis/química , Proteus mirabilis/clasificación , Proteus mirabilis/aislamiento & purificación , Serogrupo , Serotipificación
5.
J Antimicrob Chemother ; 70(9): 2543-6, 2015 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-26066582

RESUMEN

OBJECTIVES: To characterize MDR genomic islands related to Salmonella genomic island 1 (SGI1) and Proteus genomic island 1 (PGI1) in Proteus mirabilis from human and animal sources in France in light of the previously reported cases. METHODS: A total of 52 and 46 P. mirabilis clinical strains from human and animal sources, respectively, were studied for the period 2010-13. MDR was assessed by antimicrobial susceptibility testing, PCR detection of SGI1 and PGI1 and PCR mapping of the MDR regions. The diversity of the SGI1/PGI1-positive P. mirabilis strains was assessed by PFGE. RESULTS: Twelve P. mirabilis strains (5 humans and 7 dogs) were found to harbour an MDR island related to SGI1 or PGI1. Among them, several SGI1 variants were identified in diverse P. mirabilis genetic backgrounds. The variant SGI1-V, which harbours the ESBL bla VEB-6 gene, was found in closely genetically related human and dog P. mirabilis strains. The recently described PGI1 element was also identified in human and dog strains. Finally, one strain harboured a novel SGI genomic island closely related to SGI1 and SGI2 without an insertion of the MDR region. CONCLUSION: This study reports for the first time, to our knowledge, SGI1-positive and PGI1-positive P. mirabilis strains from dogs in France. The genetic diversity of the strains suggests several independent horizontal acquisitions of these MDR elements. The potential transmission of SGI1/PGI1-positive P. mirabilis strains between animals and humans is of public health concern, notably with regard to the spread of ESBL and carbapenemase genes, i.e. bla VEB-6 and bla NDM-1.


Asunto(s)
Antibacterianos/farmacología , Farmacorresistencia Bacteriana Múltiple , Secuencias Repetitivas Esparcidas , Infecciones por Proteus/microbiología , Infecciones por Proteus/veterinaria , Proteus mirabilis/efectos de los fármacos , Proteus mirabilis/aislamiento & purificación , Animales , ADN Bacteriano/genética , Perros , Electroforesis en Gel de Campo Pulsado , Francia , Transferencia de Gen Horizontal , Variación Genética , Islas Genómicas , Genotipo , Humanos , Pruebas de Sensibilidad Microbiana , Tipificación Molecular , Reacción en Cadena de la Polimerasa , Proteus mirabilis/clasificación , Proteus mirabilis/genética
6.
J Antimicrob Chemother ; 69(4): 973-6, 2014 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-24235093

RESUMEN

OBJECTIVES: To describe a novel functional class 2 integron that was found in clinical Proteus mirabilis isolates. METHODS: Class 1 and 2 integrons were screened by PCR in 153 clinical Proteus isolates. The variable regions of class 1 and 2 integrons were determined by restriction analysis and sequencing. The mutations of internal stop codons in class 2 integrons and their common promoters were also determined by sequencing. Enterobacterial repetitive intergenic consensus (ERIC)-PCR was used to analyse the phylogenetic relations of class 2 integron-positive P. mirabilis isolates. RESULTS: Class 1 integrons were detected in 96 (63%) of 153 Proteus isolates: eight different gene cassette arrays were detected, including dfrA32-ereA1-aadA2, which was detected for the first time in P. mirabilis. Class 2 integrons were detected in 101 (66%) of 153 Proteus isolates: four different gene cassette arrays were detected, including dfrA1-catB2-sat2-aadA1, which was detected for the first time in a class 2 integron. A novel functional class 2 integron was detected in 38 P. mirabilis isolates with a common promoter (-35 TTTAAT|16 bp|-10 TAAAGT). The variable region of this functional class 2 integron contained dfrA14 and three novel open reading frames with unknown functions. Very similar ERIC-PCR fingerprinting patterns were detected in these 38 P. mirabilis isolates and were different from other class 2 integron-positive isolates. CONCLUSIONS: A novel functional class 2 integron was found for the first time in P. mirabilis. These functional class 2 integron-harbouring P. mirabilis isolates were likely to be clonally spread in our hospital.


Asunto(s)
Integrones , Infecciones por Proteus/microbiología , Proteus mirabilis/genética , Codón de Terminación , ADN Bacteriano/química , ADN Bacteriano/genética , Genotipo , Humanos , Datos de Secuencia Molecular , Tipificación Molecular , Filogenia , Reacción en Cadena de la Polimerasa , Polimorfismo de Longitud del Fragmento de Restricción , Regiones Promotoras Genéticas , Proteus mirabilis/clasificación , Proteus mirabilis/aislamiento & purificación , Análisis de Secuencia de ADN
7.
Appl Microbiol Biotechnol ; 98(19): 8357-66, 2014 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-24903814

RESUMEN

Synanthropic flies have been implicated in the rapid dissemination of antibiotic-resistant bacteria and resistance determinants in the biosphere. These flies stably harbor a considerable number of bacteria that exhibit resistance to various antibiotics, but the mechanisms underlying this phenomenon remain unclear. In this study, we investigated the persistence of antibiotic-resistant bacteria in the digestive tract of houseflies and green bottle flies, using Proteus mirabilis as a model microorganism. One resistant strain carried the blaTEM and aphA1 genes, and another carried a plasmid containing qnrD gene. Quantitative PCR and 454 pyrosequencing were used to monitor the relative abundance of the Proteus strains, as well as potential changes in the overall structure of the whole bacterial community incurred by the artificial induction of Proteus cultures. Both antibiotic-resistant and -sensitive P. mirabilis strains persisted in the fly digestive tract for at least 3 days, and there was no significant difference in the relative abundance of resistant and sensitive strains despite the lower growth rate of resistant strains when cultured in vitro. Therefore, conditions in the fly digestive tract may allow resistant strains to survive the competition with sensitive strains in the absence of antibiotic selective pressure. The composition of the fly-associated bacterial community changed over time, but the contribution of the artificially introduced P. mirabilis strains to these changes was not clear. In order to explain these changes, it will be necessary to obtain more information about bacterial interspecies antagonism in the fly digestive tract.


Asunto(s)
Antibacterianos/farmacología , Dípteros/microbiología , Moscas Domésticas/microbiología , Proteus mirabilis/efectos de los fármacos , Proteus mirabilis/aislamiento & purificación , Animales , Farmacorresistencia Bacteriana , Tracto Gastrointestinal/microbiología , Microbiota , Proteus mirabilis/clasificación , Proteus mirabilis/genética
8.
Diagn Microbiol Infect Dis ; 109(2): 116286, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38574445

RESUMEN

BACKGROUND: Although Proteus species are occasional causes of serious infections, their epidemiology has not been well defined. The objective was to describe the overall and species-specific occurrence and determinants of Proteus species bloodstream infection (BSI) in a large Australian population. METHODS: All Queensland residents with Proteus species BSI identified within the publicly funded healthcare system between 2000 and 2019 were included. RESULTS: A total of 2,143 incident episodes of Proteus species BSI were identified among 2,079 Queensland residents. The prevalence of comorbid illness differed with higher Charlson comorbidity scores observed with P. penneri and P. vulgaris, and higher prevalence of liver disease with P. penneri, higher comorbid cancer with P. vulgaris, and lower diabetes and renal disease prevalence with P. mirabilis BSIs. CONCLUSION: This study provides novel information on the epidemiology of Proteus species BSI.


Asunto(s)
Bacteriemia , Infecciones por Proteus , Proteus , Humanos , Bacteriemia/epidemiología , Bacteriemia/microbiología , Masculino , Persona de Mediana Edad , Femenino , Infecciones por Proteus/epidemiología , Infecciones por Proteus/microbiología , Anciano , Queensland/epidemiología , Proteus/clasificación , Proteus/aislamiento & purificación , Prevalencia , Adulto , Comorbilidad , Anciano de 80 o más Años , Adulto Joven , Proteus mirabilis/aislamiento & purificación , Proteus mirabilis/clasificación
9.
Scand J Infect Dis ; 45(8): 600-5, 2013 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-23746343

RESUMEN

OBJECTIVES: The aim of this study was to investigate the prevalence and the emergence of plasmid-mediated quinolone resistance among broad-spectrum beta-lactam-resistant Proteus mirabilis and Morganella morganii clinical isolates recovered in the Military Hospital in Tunisia. METHODS: Of 200 strains examined, 50 exhibited resistance to quinolones. Quinolone resistance determinants (qnr and aac(6')-Ib-cr) were characterized by multiplex PCR and sequencing. Chromosomal quinolone resistance mutations in the quinolone resistance-determining region (QRDR) and class 1 integron characterization were analysed by PCR and sequencing. The clonal relationship between the isolates was studied by pulsed-field gel electrophoresis (PFGE). RESULTS: Fourteen isolates harboured qnrA6 and among them 8 (57%) were extended-spectrum beta-lactamase (ESBL) producers, whilst 12 (85%) isolates harboured blaDHA-1. Mutations in the QRDR were detected in gyrA (Ser83Ile, Glu87Lys), gyrB (Ser464Phe), and parC (Ser80Ile). qnrA6 and blaDHA-1 genes were found embedded in complex sul1-type class 1 integrons. A gene cassette carrying aac(6')-Ib-cr was found located in the class 1 integron upstream of the qacEΔ1 gene. According to the PFGE analysis, the isolates were clonally unrelated. CONCLUSIONS: This is the first description in North Africa of class 1 integrons carrying blaDHA-1, qnrA6 gene, and aac(6')-Ib-cr determinants in clinical strains of Proteus mirabilis and Morganella morganii.


Asunto(s)
Antibacterianos/farmacología , Farmacorresistencia Bacteriana , Infecciones por Enterobacteriaceae/microbiología , Genes Bacterianos , Morganella morganii/genética , Proteus mirabilis/genética , Quinolonas/farmacología , Adulto , Anciano , ADN Bacteriano/genética , Electroforesis en Gel de Campo Pulsado , Femenino , Hospitales Militares , Humanos , Integrones , Masculino , Persona de Mediana Edad , Tipificación Molecular , Morganella morganii/clasificación , Morganella morganii/efectos de los fármacos , Morganella morganii/aislamiento & purificación , Plásmidos , Reacción en Cadena de la Polimerasa , Proteus mirabilis/clasificación , Proteus mirabilis/efectos de los fármacos , Proteus mirabilis/aislamiento & purificación , Análisis de Secuencia de ADN , Túnez , beta-Lactamas/farmacología
10.
Wei Sheng Wu Xue Bao ; 52(6): 696-702, 2012 Jun 04.
Artículo en Zh | MEDLINE | ID: mdl-22934349

RESUMEN

OBJECTIVE: To screen and identify a bacterium capable of converting daidzein to S-equol. METHODS: We used antibiotics to limit unrelated bacterial growth and enrich the target bacteria, and isolated the aim bacterial strain from rat intestine. The metabolite of daidzein was tested by HPLC, MS and NMR. The taxonomic group of the strain was identified by 16S rDNA sequence analysis and phylogenetic tree; the strain's morphological and physiological biochemical characters were also tested. RESULTS: A gram-negative facultative bacterial strain LH-52 (JN861767) capable of transforming daidzein to S-equol was isolated. Basic Local Alignment Search Tool (BLAST) search of LH-52's 16S rDNA sequence on GenBank suggested that this strain has 99% similarity to that of Proteus mirabilis, the morphological and physiological biochemical characteristics of LH-52 also showed highly similarity to P. mirabilis. Based on these data, we identified LH-52 as P. mirabilis, and named it as P. mirabilis LH-52. The results of HPLC, MS and NMR suggested that the metabolite of daidzien was S-equol. CONCLUSIONS: Bacteria strain P. mirabilis LH-52 was the first reported facultative bacteria strain capable of converting daidzein to S-equol, and might be more suitable in industrial application than obligate anareobic bacterial strains.


Asunto(s)
Equol/metabolismo , Isoflavonas/metabolismo , Proteus mirabilis/aislamiento & purificación , Proteus mirabilis/metabolismo , Animales , Intestinos/microbiología , Filogenia , Proteus mirabilis/clasificación , Proteus mirabilis/genética , ARN Ribosómico 16S/genética , Ratas
11.
Scand J Infect Dis ; 43(11-12): 957-61, 2011 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-21888562

RESUMEN

We performed a retrospective extended-spectrum ß-lactamase (ESBL) molecular characterization of Proteus mirabilis isolates recovered from urine of spinal cord injury patients. A incorrectly detected TEM-24-producing clone and a new weakly expressed TEM-derived ESBL were discovered. In such patients, ESBL detection in daily practice should be improved by systematic use of a synergy test in strains of P. mirabilis resistant to penicillins.


Asunto(s)
Bacteriuria/epidemiología , Brotes de Enfermedades , Infecciones por Proteus/epidemiología , Proteus mirabilis/enzimología , Proteus mirabilis/aislamiento & purificación , Traumatismos de la Médula Espinal/complicaciones , beta-Lactamasas/genética , Antibacterianos/farmacología , Bacteriuria/microbiología , Análisis por Conglomerados , Genotipo , Humanos , Penicilinas/farmacología , Infecciones por Proteus/microbiología , Proteus mirabilis/clasificación , Proteus mirabilis/genética , Recurrencia , Estudios Retrospectivos , Orina/microbiología , Resistencia betalactámica
12.
Biochemistry (Mosc) ; 76(7): 851-61, 2011 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-21999547

RESUMEN

The aim of this work was to serotype Proteus mirabilis urinary tract infection (UTI) strains based on chemically defined O-antigens with the use of two clinical collections from Sweden and Poland consisting of 99 and 24 UTI strains, respectively. A simple two-step serotyping scheme was proposed using enzyme immunoassay with heat-stable surface antigens of Proteus cells and immunoblotting with isolated lipopolysaccharides (LPSs). Using polyclonal anti-P. mirabilis rabbit antisera, 50 Swedish and 8 Polish strains were classified into serogroups O10, O38, O36, O30, O17, O23, O9, O40, O49, O27, O5, O13, O24, O14, and O33. From the Swedish strains, 10 belonged to serogroup O10 and five to each of serogroups O38, O36, and O9. Therefore, none of the O-serogroups was predominant. The majority of the serotyped clinical strains possess acidic O-antigens containing uronic acids and various acidic non-carbohydrate substituents. In immunoblotting, antisera cross-reacted with both O-antigen and core of LPSs. The core region of 19 LPSs bound a single serum, and that of 12 LPSs bound more than two sera. Following bioinformatic analysis of the available sequences, a molecular approach to the prediction of Proteus core oligosaccharide structures was proposed. The identification of the core type of P. mirabilis R110, derived from a serogroup O3 wild strain, using restriction fragments length polymorphism analysis of galacturonic acid transferase is shown as an example. In summary, the most frequent O-serogroups among P. mirabilis UTI stains were identified. The diversity of serological reactions of LPSs is useful for serotyping of P. mirabilis clinical isolates. A possible role of the acidic components of O-antigens in UTI is discussed.


Asunto(s)
Antígenos O/inmunología , Infecciones por Proteus/inmunología , Proteus mirabilis/clasificación , Infecciones Urinarias/inmunología , Animales , Secuencia de Carbohidratos , Reacciones Cruzadas , Humanos , Lipopolisacáridos/inmunología , Datos de Secuencia Molecular , Antígenos O/química , Polonia , Conejos , Serotipificación , Suecia
13.
Can J Microbiol ; 56(10): 822-30, 2010 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-20962905

RESUMEN

Phosphate-solubilizing bacteria (PSBs) were isolated from different plant rhizosphere soils of various agroecological regions of India. These isolates showed synthesis of pyrroloquinoline quinone (PQQ), production of gluconic acid, and release of phosphorus from insoluble tricalcium phosphate. The bacterial isolates synthesizing PQQ also showed higher tolerance to ultraviolet C radiation and mitomycin C as compared to Escherichia coli but were less tolerant than Deinococcus radiodurans. Unlike E. coli, PSB isolates showed higher tolerance to DNA damage when grown in the absence of inorganic phosphate. Higher tolerance to ultraviolet C radiation and oxidative stress in these PSBs grown under PQQ synthesis inducible conditions, namely phosphate starvation, might suggest the possible additional role of this redox cofactor in the survival of these isolates under extreme abiotic stress conditions.


Asunto(s)
Burkholderia cepacia/fisiología , Daño del ADN , Enterobacteriaceae/fisiología , Cofactor PQQ/biosíntesis , Fosfatos/metabolismo , Pseudomonas oleovorans/fisiología , Microbiología del Suelo , Burkholderia cepacia/clasificación , Burkholderia cepacia/aislamiento & purificación , Fosfatos de Calcio/metabolismo , Catalasa , Enterobacter/clasificación , Enterobacter/genética , Enterobacter/aislamiento & purificación , Enterobacter/fisiología , Enterobacteriaceae/clasificación , Enterobacteriaceae/genética , Enterobacteriaceae/aislamiento & purificación , Gluconatos/metabolismo , India , Mitomicina/farmacología , Estrés Oxidativo , Pantoea/clasificación , Pantoea/genética , Pantoea/aislamiento & purificación , Pantoea/fisiología , Reacción en Cadena de la Polimerasa , Proteus mirabilis/clasificación , Proteus mirabilis/genética , Proteus mirabilis/aislamiento & purificación , Proteus mirabilis/fisiología , Pseudomonas oleovorans/clasificación , Pseudomonas oleovorans/genética , Pseudomonas oleovorans/aislamiento & purificación , Tolerancia a Radiación , Rizosfera , Rayos Ultravioleta
14.
Sci Rep ; 10(1): 8716, 2020 05 26.
Artículo en Inglés | MEDLINE | ID: mdl-32457296

RESUMEN

Integrative Conjugative Elements (ICE's) of the SXT/R391 family have largely been detected in clinical or environmental isolates of Gammaproteobacteria, particularly Vibrio and Proteus species. As wastewater treatment plants accumulate a large and diverse number of such species, we examined raw water samples taken from a municipal wastewater treatment plant initially using SXT/R391 family integrase gene-specific PCR probes to detect the presence of such elements in a directed approach. A positive amplification occurred over a full year period and a subsequent Restriction Fragment Length Polymorphism (RFLP) analysis revealed a very limited diversity in the treatment plant examined. Samples demonstrating positive amplification were cultured using Vibrio and Proteus selective media and PCR amplification tracking was utilized to monitor SXT/R391-ICE family containing strains. This screening procedure resulted in the isolation and identification of a Proteus mirabilis strain harbouring an ICE. Whole-genome sequencing of this ICE containing strain using Illumina sequencing technology revealed a novel 81 kb element that contained 75 open reading frames on annotation but contained no antibiotic or metal resistance determinants. Comparative genomics revealed the element contained a conserved ICE core with one of the insertions containing a novel bacteriophage defence mechanism. This directed isolation suggests that ICE elements are present in the environment without apparent selective pressure but may contain adaptive functions allowing survival in particular environments such as municipal wastewater which are reservoirs for large bacterial phage populations.


Asunto(s)
Elementos Transponibles de ADN , Proteus mirabilis/aislamiento & purificación , Aguas Residuales/microbiología , Secuenciación Completa del Genoma/métodos , Ciudades , Genómica , Secuenciación de Nucleótidos de Alto Rendimiento , Sistemas de Lectura Abierta , Filogenia , Polimorfismo de Longitud del Fragmento de Restricción , Proteus mirabilis/clasificación , Proteus mirabilis/genética
15.
Int J Antimicrob Agents ; 56(2): 106060, 2020 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-32574790

RESUMEN

Carbapenem-resistant Enterobacterales have become a major public-health issue worldwide. Here we report an outbreak caused by a clonal multidrug-resistant Proteus mirabilis strain producing VIM-4 metallo-ß-lactamase (MBL) and TEM-2 ß-lactamase in a Greek tertiary-care hospital. From July 2015 to February 2016, 27 imipenem-resistant P. mirabilis isolates were recovered from 14 patients hospitalised in two intensive care units (ICUs) and the internal medicine department in AHEPA University Hospital, Thessaloniki. The isolates were either susceptible or resistant to meropenem and were resistant to all remaining ß-lactams except aztreonam. Phenotypic and molecular analysis revealed that all of the isolates harboured a blaVIM-4 MBL gene. Resistome analysis of a representative isolate showed the presence of an IncQ1 plasmid harbouring the blaVIM-4 carbapenemase and blaTEM-2 ß-lactamase genes among resistance genes coding for resistance to ß-lactams, aminoglycosides, trimethoprim, sulfonamides and lincosamides. Genotyping by pulsed-field electrophoresis (PFGE) revealed that the isolates were epidemiologically related. After recovery of the index carbapenemase-producing P. mirabilis clinical isolate, infection control measures were intensified in the affected departments. Rectal sampling for carbapenem-resistant bacteria was initiated on a weekly basis among patients admitted to the general ICU. The outbreak was finally interrupted 6 months later in February 2016. This is the first documentation of the blaVIM-4 MBL gene in P. mirabilis as well as the first hospital outbreak caused by a MBL-producing P. mirabilis strain.


Asunto(s)
Antibacterianos/farmacología , Proteínas Bacterianas/genética , Infecciones por Proteus/microbiología , Proteus mirabilis/genética , beta-Lactamasas/genética , Adulto , Anciano , Anciano de 80 o más Años , Aztreonam/farmacología , ADN Bacteriano , Brotes de Enfermedades , Farmacorresistencia Bacteriana Múltiple/genética , Femenino , Técnicas de Genotipaje , Grecia/epidemiología , Humanos , Imipenem/farmacología , Masculino , Meropenem/farmacología , Pruebas de Sensibilidad Microbiana , Persona de Mediana Edad , Infecciones por Proteus/epidemiología , Proteus mirabilis/clasificación , Proteus mirabilis/aislamiento & purificación , Centros de Atención Terciaria , Secuenciación Completa del Genoma , Adulto Joven , Resistencia betalactámica , beta-Lactamas/farmacología
16.
Braz J Microbiol ; 50(3): 685-694, 2019 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-31049879

RESUMEN

Proteus mirabilis is an opportunistic pathogen often associated with a variety of human infections acquired both in the community and in hospitals. In this context, the present work aimed to evaluate the genotypic and phenotypic characteristics of the virulence factors and antimicrobial resistance determinants of 32 P. mirabilis strains isolated from chicken carcasses in a poultry slaughterhouse in the north of the state of Paraná, Brazil, in order to assess a potential zoonotic risk. The isolates presented a variety of virulence genes that contribute to the development of infection in humans. The mrpA, pmfA, atfA (fimbriae), ireA (siderophores receptor), zapA, ptA (Proteases), and hpmA (hemolysin) genes were found in 32 (100%) isolates and ucaA (fimbriae) in 16 (50%). All isolates showed aggregative adherence in HEp-2 cells and formed biofilms. Of all strains, 27 (84.38%) showed cytotoxic effects in Vero cells. Antimicrobial susceptibility was tested using 20 antimicrobials, in which 25 (78.13%) strains were considered multidrug-resistant. The presence of blaESBL and blaampC genes conferring resistance to ß-lactams and qnr to quinolones were also detected in the isolates after presumption in the phenotypic test, in which 7 (21.88%) isolates contained the CTX-M-2 group, 11 (34.38%) contained CIT group and 19 (59.38%) contained qnrD. Therefore, chicken carcasses contaminated with P. mirabilis may pose a health risk to the consumer, as these isolates have a variety of virulence and antimicrobial resistance characteristics that can be found in P. mirabilis strains isolated from human infections.


Asunto(s)
Antibacterianos/farmacología , Proteínas Bacterianas/genética , Enfermedades de las Aves de Corral/microbiología , Infecciones por Proteus/microbiología , Infecciones por Proteus/veterinaria , Proteus mirabilis/efectos de los fármacos , Factores de Virulencia/genética , Zoonosis/microbiología , Animales , Proteínas Bacterianas/metabolismo , Brasil , Pollos , Farmacorresistencia Bacteriana , Humanos , Carne/microbiología , Pruebas de Sensibilidad Microbiana , Infecciones por Proteus/transmisión , Proteus mirabilis/clasificación , Proteus mirabilis/genética , Proteus mirabilis/aislamiento & purificación , Factores de Virulencia/metabolismo , Zoonosis/transmisión , beta-Lactamasas/genética , beta-Lactamasas/metabolismo , beta-Lactamas/farmacología
17.
Nat Commun ; 10(1): 4927, 2019 10 30.
Artículo en Inglés | MEDLINE | ID: mdl-31666527

RESUMEN

Raman optical spectroscopy promises label-free bacterial detection, identification, and antibiotic susceptibility testing in a single step. However, achieving clinically relevant speeds and accuracies remains challenging due to weak Raman signal from bacterial cells and numerous bacterial species and phenotypes. Here we generate an extensive dataset of bacterial Raman spectra and apply deep learning approaches to accurately identify 30 common bacterial pathogens. Even on low signal-to-noise spectra, we achieve average isolate-level accuracies exceeding 82% and antibiotic treatment identification accuracies of 97.0±0.3%. We also show that this approach distinguishes between methicillin-resistant and -susceptible isolates of Staphylococcus aureus (MRSA and MSSA) with 89±0.1% accuracy. We validate our results on clinical isolates from 50 patients. Using just 10 bacterial spectra from each patient isolate, we achieve treatment identification accuracies of 99.7%. Our approach has potential for culture-free pathogen identification and antibiotic susceptibility testing, and could be readily extended for diagnostics on blood, urine, and sputum.


Asunto(s)
Antibacterianos/uso terapéutico , Bacterias/clasificación , Infecciones Bacterianas/diagnóstico , Aprendizaje Profundo , Espectrometría Raman/métodos , Bacterias/química , Infecciones Bacterianas/tratamiento farmacológico , Infecciones Bacterianas/microbiología , Técnicas de Tipificación Bacteriana , Candida/química , Candida/clasificación , Enterococcus/química , Enterococcus/clasificación , Escherichia coli/química , Escherichia coli/clasificación , Humanos , Klebsiella/química , Klebsiella/clasificación , Modelos Logísticos , Staphylococcus aureus Resistente a Meticilina/química , Staphylococcus aureus Resistente a Meticilina/clasificación , Pruebas de Sensibilidad Microbiana , Redes Neurales de la Computación , Análisis de Componente Principal , Proteus mirabilis/química , Proteus mirabilis/clasificación , Pseudomonas aeruginosa/química , Pseudomonas aeruginosa/clasificación , Salmonella enterica/química , Salmonella enterica/clasificación , Análisis de la Célula Individual , Staphylococcus aureus/química , Staphylococcus aureus/clasificación , Streptococcus/química , Streptococcus/clasificación , Máquina de Vectores de Soporte
18.
BMC Res Notes ; 12(1): 244, 2019 Apr 29.
Artículo en Inglés | MEDLINE | ID: mdl-31036061

RESUMEN

OBJECTIVES: Diabetic foot ulcers (DFUs) often lead to hospital admissions, amputations and deaths; however, there is no up-to-date information on microbial isolates from DFUs and no mention of utilization of molecular techniques in Sub-Saharan Africa. We conducted a cross-sectional study among 83 adult patients at a tertiary hospital in Kenya over 12 months. The study aimed to isolate, identify bacteria, their antibiotic susceptibility patterns in active DFUs, and to compare standard microbiological methods versus a real-time PCR commercial kit in the detection of Staphylococcus aureus DNA and methicillin-resistant S. aureus (MRSA) DNA. RESULTS: Eighty swabs (94%) were culture-positive; 29% were Gram-positive and 65% were Gram-negative. The main organisms isolated were S. aureus (16%), Escherichia coli (15%), Proteus mirabilis (11%), Klebsiella pneumoniae (7%) and Pseudomonas aeruginosa (7%). The bacterial isolates showed resistance to commonly used antibiotics such as ampicillin, amoxicillin, cefepime, ceftazidime, cefuroxime, clindamycin, erythromycin, piperacillin-tazobactam, tetracycline and trimethoprim-sulphamethoxazole (TMPSMX). Thirty-one percent of the S. aureus isolated and 40% of the Gram-negatives were multi-drug resistant organisms (MDROs). There was a high prevalence of nosocomial bacteria. MRSA were not identified using culture methods but were identified using PCR. PCR was more sensitive but less specific than culture-based methods to identify S. aureus.


Asunto(s)
Antibacterianos/uso terapéutico , Infecciones Bacterianas/diagnóstico , Pie Diabético/diagnóstico , Farmacorresistencia Bacteriana Múltiple , Staphylococcus aureus Resistente a Meticilina/efectos de los fármacos , Staphylococcus aureus/efectos de los fármacos , Infecciones Bacterianas/tratamiento farmacológico , Infecciones Bacterianas/epidemiología , Infecciones Bacterianas/microbiología , Técnicas de Tipificación Bacteriana , Cefalosporinas/uso terapéutico , Clindamicina/uso terapéutico , Estudios Transversales , Pie Diabético/tratamiento farmacológico , Pie Diabético/epidemiología , Pie Diabético/microbiología , Escherichia coli/clasificación , Escherichia coli/efectos de los fármacos , Escherichia coli/genética , Escherichia coli/aislamiento & purificación , Humanos , Kenia/epidemiología , Klebsiella pneumoniae/clasificación , Klebsiella pneumoniae/efectos de los fármacos , Klebsiella pneumoniae/genética , Klebsiella pneumoniae/aislamiento & purificación , Macrólidos/uso terapéutico , Staphylococcus aureus Resistente a Meticilina/clasificación , Staphylococcus aureus Resistente a Meticilina/genética , Staphylococcus aureus Resistente a Meticilina/aislamiento & purificación , Pruebas de Sensibilidad Microbiana , Penicilinas/uso terapéutico , Proteus mirabilis/clasificación , Proteus mirabilis/efectos de los fármacos , Proteus mirabilis/genética , Proteus mirabilis/aislamiento & purificación , Pseudomonas aeruginosa/clasificación , Pseudomonas aeruginosa/efectos de los fármacos , Pseudomonas aeruginosa/genética , Pseudomonas aeruginosa/aislamiento & purificación , Reacción en Cadena en Tiempo Real de la Polimerasa , Staphylococcus aureus/clasificación , Staphylococcus aureus/genética , Staphylococcus aureus/aislamiento & purificación , Sulfanilamidas/uso terapéutico
19.
FEMS Immunol Med Microbiol ; 54(2): 185-94, 2008 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-18665848

RESUMEN

Two Proteus mirabilis strains, 3 B-m and 3 B-k, were isolated from urine and faeces of a hospitalized patient from Lodz, Poland. It was suggested that one strain originated from the other, and the presence of the bacilli in the patient's urinary tract was most probably a consequence of autoinfection. The O-polysaccharide was obtained by mild acid degradation of the lipopolysaccharide of P. mirabilis 3 B-m and studied by sugar analysis and nuclear magnetic resonance spectroscopy, including two-dimensional rotating frame Overhause effect spectroscopy (ROESY) and 1H,13C heteronuclear single quantum coherence (HSQC) experiments. The following structure of the linear trisaccharide-repeating unit of the O-polysaccharide was established:-->2)-beta-D-Glcp-(1-->3)-alpha-L-6dTalp2Ac-(1-->3)-beta-D-GlcpNAc-(1-->where 6dTal2Ac stands for 2-O-acetyl-6-deoxy-L-talose. It resembles the structure of the O-polysaccharide of Proteus penneri O66, which includes additional lateral residues of 2,3-diacetamido-2,3,6-trideoxy-L-mannose. The lipopolysaccharides from two P. mirabilis strains studied were serologically identical to each other but not to that from any of the existing 76 Proteus O-serogroups. Therefore, the strains were classified into a new O77 serogroup specially created in the genus Proteus. Serological studies using Western blot and enzyme-linked immunosorbent assay with intact and adsorbed O-antisera showed that the P. mirabilis O77 antigen is related to Proteus vulgaris O2 and P. penneri O68 antigens, and a putative disaccharide epitope responsible for the cross-reactivity was revealed.


Asunto(s)
Antígenos O/química , Antígenos O/inmunología , Infecciones por Proteus/microbiología , Proteus mirabilis/clasificación , Proteus mirabilis/inmunología , Western Blotting , Conformación de Carbohidratos , Secuencia de Carbohidratos , Dermatoglifia del ADN , Heces/microbiología , Femenino , Humanos , Datos de Secuencia Molecular , Resonancia Magnética Nuclear Biomolecular , Proteus mirabilis/genética , Proteus mirabilis/aislamiento & purificación , Serotipificación , Orina/microbiología
20.
FEMS Immunol Med Microbiol ; 53(3): 395-403, 2008 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-18625011

RESUMEN

The O-specific polysaccharide (OPS) isolated from the lipopolysaccharide of Proteus mirabilis O36 was found to have a pentasaccharide repeating unit of the following structure: -->2)-beta-D-Ribf-(1-->4)-beta-D-Galp-(1-->4)-alpha-D-GlcpNAc6Ac-(1-->4)-beta-D-Galp-(1-->3)-alpha-D-GlcpNAc-(1-->. The structure is unique among Proteus OPS, which is in agreement with the classification of this strain into a separate Proteus O-serogroup. Remarkably, the P. mirabilis O36-polysaccharide has the same structure as the OPS of Escherichia coli O153, except that the latter is devoid of O-acetyl groups. The cross-reaction of anti-O36 antibodies with the O-part of E. coli O153 lipopolysaccharide is observed. In the present study, two steps of serotyping Proteus strains are proposed: screening of dry mass with enzyme-linked immunosorbent assay and immunoblot with the crude lipopolysaccharides. This method allowed serotyping of 99 P. mirabilis strains infecting the human urinary tract. Three strains were classified into serogroup O36. The migration pattern of these lipopolysaccharides fraction with long O-specific PSs was similar to the standard laboratory P. mirabilis O36 (Prk 62/57) lipopolysaccharide. The relatively low number of clinical strains belonging to serogroup O36 did not correspond to the presence of anti-P. mirabilis O36 antibodies in the blood donors' sera. Twenty-five percent of tested sera contained a statistically significant elevated level of antibodies reacting with thermostable surface antigens of P. mirabilis O36. The presence and amount of antibodies correlated with Thr399Ile TLR4 polymorphism types (P=0.044).


Asunto(s)
Antígenos O/química , Antígenos O/inmunología , Proteus mirabilis/química , Proteus mirabilis/clasificación , Anticuerpos Antibacterianos/metabolismo , Secuencia de Carbohidratos , Reacciones Cruzadas , Escherichia coli/química , Humanos , Datos de Secuencia Molecular , Proteus mirabilis/aislamiento & purificación , Serotipificación , Infecciones Urinarias/microbiología
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