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1.
Plant Cell ; 29(11): 2882-2894, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-29061867

RESUMEN

Cellular proteins undergo denaturation and oxidative damage under heat stress, forming insoluble aggregates that are toxic to cells. Plants possess versatile mechanisms to deal with insoluble protein aggregates. Denatured proteins are either renatured to their native conformations or removed from cellular compartments; these processes are often referred to as protein quality control. Heat shock proteins (HSPs) act as molecular chaperones that assist in the renaturation-degradation process. However, how protein aggregates are cleared from cells in plants is largely unknown. Here, we demonstrate that heat-induced protein aggregates are removed by a protein quality control system that includes the ZEITLUPE (ZTL) E3 ubiquitin ligase, a central circadian clock component in Arabidopsis thaliana ZTL mediates the polyubiquitination of aggregated proteins, which leads to proteasomal degradation and enhances the thermotolerance of plants growing at high temperatures. The ZTL-defective ztl-105 mutant exhibited reduced thermotolerance, which was accompanied by a decline in polyubiquitination but an increase in protein aggregate formation. ZTL and its interacting partner HSP90 were cofractionated with insoluble aggregates under heat stress, indicating that ZTL contributes to the thermoresponsive protein quality control machinery. Notably, the circadian clock was hypersensitive to heat in ztl-105 We propose that ZTL-mediated protein quality control contributes to the thermal stability of the circadian clock.


Asunto(s)
Proteínas de Arabidopsis/genética , Arabidopsis/genética , Regulación de la Expresión Génica de las Plantas , Calor , Desnaturalización Proteica , Renaturación de Proteína , Adaptación Fisiológica/genética , Arabidopsis/metabolismo , Proteínas de Arabidopsis/metabolismo , Ritmo Circadiano , Mutación , Poliubiquitina/metabolismo , Complejo de la Endopetidasa Proteasomal/metabolismo , Agregado de Proteínas , Proteolisis , Ubiquitina-Proteína Ligasas/genética , Ubiquitina-Proteína Ligasas/metabolismo , Ubiquitinación
2.
Biochemistry (Mosc) ; 82(11): 1304-1313, 2017 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-29223157

RESUMEN

Recombinant porin OmpF (an integral protein of bacterial outer membrane) from Yersinia pseudotuberculosis was synthesized in Escherichia coli cells as inclusion bodies. By combining the methods of anion-exchange and gel filtration chromatographies, recombinant OmpF (rOmpF) was isolated as an individual protein in its denatured state, and its characteristic properties (molecular mass, N-terminal amino acid sequence, and hydrodynamic radius of the protein in 8 M urea solution) were determined. According to the data of gel filtration, dynamic light scattering, optical spectroscopy, and binding of the hydrophobic fluorescent probe 8-anilino-1-naphthalenesulfonic acid, the rOmpF is fully unfolded in 8 M urea and exists in random coil conformation. In aqueous solutions, rOmpF undergoes conformational changes, reversible self-association, and aggregation. When transferred from 8 M urea into water, PBS (containing 0.15 M NaCl, pH 7.4), or buffer containing 0.8 M urea (pH 8.0), fully unfolded rOmpF forms relatively compact monomeric intermediates prone to self-association with formation of multimers. The oligomeric intermediates have high content of native protein-like secondary structure and pronounced tertiary structure. In acidic media (pH 5.0, close to the protein isoelectric point), rOmpF undergoes rapid irreversible aggregation. Therefore, we found that medium composition significantly affects both porin folding and processes of its self-association and aggregation.


Asunto(s)
Porinas/química , Yersinia pseudotuberculosis/química , Proteínas de la Membrana Bacteriana Externa , Proteínas Bacterianas , Escherichia coli/genética , Escherichia coli/metabolismo , Cuerpos de Inclusión , Porinas/biosíntesis , Porinas/aislamiento & purificación , Conformación Proteica , Desnaturalización Proteica/efectos de los fármacos , Pliegue de Proteína/efectos de los fármacos , Multimerización de Proteína/efectos de los fármacos , Renaturación de Proteína/efectos de los fármacos , Proteínas Recombinantes , Soluciones/química , Soluciones/farmacología , Agua
3.
Pharm Res ; 33(6): 1359-69, 2016 06.
Artículo en Inglés | MEDLINE | ID: mdl-26928669

RESUMEN

PURPOSE: To present a convenient screening method for evaluating additive effects on the renaturation of an acid-exposed monoclonal antibody (mAb). METHODS: The assay involves brief incubation of a mAb at acidic pH and subsequent neutralization in the absence or presence of additive to induce mainly aggregation. An increase in absorbance depicted aggregation. The recorded aggregation data traces were fitted with a nucleation-autocatalytic growth model for the extraction of kinetic parameters. RESULTS: All kinetic data traces were fitted successfully with the selected model and the adjusted R square values were greater than 0.99. Trehalose had strongly stabilizing, proline mildly stabilizing and trimethylamine oxide had destabilizing effects on both the nucleation and growth phase of the reaction. Histidine was strongly stabilizing but was limited by its poor solubility. CONCLUSION: The results demonstrate the suitability of the experimental mAb aggregation system and the nucleation-autocatalytic growth fit in the screening and quantification of additive effects on the renaturation of an acid-exposed mAb respectively. This will aid the investigation and derivation of quantitative structure-activity relationships of additive effects on mAb solubility.


Asunto(s)
Anticuerpos Monoclonales/química , Agregado de Proteínas , Catálisis , Composición de Medicamentos , Estabilidad de Medicamentos , Excipientes/química , Fluorometría , Histidina/química , Concentración de Iones de Hidrógeno , Cinética , Metilaminas/química , Modelos Químicos , Conformación Proteica , Desnaturalización Proteica , Pliegue de Proteína , Renaturación de Proteína , Estabilidad Proteica , Solubilidad , Relación Estructura-Actividad , Tecnología Farmacéutica/métodos , Trehalosa/química
4.
Subcell Biochem ; 72: 3-17, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26174374

RESUMEN

The denaturation of protein by pressure has been generally well known since the findings of the perfect coagulation of egg white by a pressure of 7,000 atm within 30 min by Bridgman (J Biol Chem 19:511-512, 1914), and Kiyama and Yanagimoto (Rev Phys Chem Jpn 21:41-43, 1951) confirmed that the coagulation occurs above 3,880 kg cm(-2). Grant et al. (Science 94:616, 1941) and Suzuki and Kitamura (Abstracts of 30th annual meeting of Japanese Biochemical Society, 1957) found that SH groups are detected at the compressed sample of ovalbumin. On the other hand, Johnson and Campbell (J Cell Comp Physiol 26:43-49, 1945), Tongur (Kolloid Zhur 11:274-279, 1949; Biokhimiya 17:495-503, 1952) and Suzuki et al. (Mem Res Inst Sci Eng Ritsumeikan Univ 3:1-4, 1958) reported that the thermal denaturation of proteins is retarded in a few examples by the low pressure of about 1,000 atm. Before 1960, the studies of denaturation under high pressure were, however, rare and almost qualitative compared with those by heat, acid, urea and so on, so that there was no theory for the influence of hydrostatic pressure on the mechanism of denaturation. Here I review how I started experiments and analysis on pressure denaturation of proteins in early days of 1950s and 1960s in my laboratory and others.


Asunto(s)
Presión Hidrostática , Desnaturalización Proteica , Proteínas/química , Cinética , Renaturación de Proteína
5.
Biochim Biophys Acta ; 1844(7): 1299-306, 2014 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-24769005

RESUMEN

EhCP-B9, a cysteine protease (CP) involved in Entamoeba histolytica virulence, is a potential target for disease diagnosis and drug design. After purification from inclusion bodies produced in Escherichia coli, the recombinant EhCP-B9 precursor (ppEhCP-B9) can be refolded using detergents as artificial chaperones. However, the conformational changes that occur during ppEhCP-B9 refolding remain unknown. Here, we comprehensively describe conformational changes of ppEhCP-B9 that are induced by various chemical detergents acting as chaperones, including non-ionic, zwitterionic, cationic and anionic surfactants. We monitored the effect of detergent concentration and incubation time on the secondary and tertiary structures of ppEhCP-B9 using fluorescence and circular dichroism (CD) spectroscopy. In the presence of non-ionic and zwitterionic detergents, ppEhCP-B9 adopted a ß-enriched structure (ppEhCP-B9(ß1)) without proteolytic activity at all detergent concentrations and incubation times evaluated. ppEhCP-B9 also exhibits a ß-rich structure in low concentrations of ionic detergents, but at concentrations above the critical micelle concentration (CMC), the protein acquires an α+ß structure, similar to that of papain but without proteolytic activity (ppEhCP-B9(α+ß1)). Interestingly, only within a narrow range of experimental conditions in which SDS concentrations were below the CMC, ppEhCP-B9 refolded into a ß-sheet rich structure (ppEhCP-B9(ß2)) that slowly transforms into a different type of α+ß conformation that exhibited proteolytic activity (ppEhCP-B9(α+ß2)) suggesting that enzymatic activity is gained as slow transformation occurs.


Asunto(s)
Proteasas de Cisteína/química , Detergentes/farmacología , Entamoeba histolytica/enzimología , Conformación Proteica/efectos de los fármacos , Desnaturalización Proteica/efectos de los fármacos , Pliegue de Proteína/efectos de los fármacos , Renaturación de Proteína/efectos de los fármacos , Dicroismo Circular , Proteasas de Cisteína/aislamiento & purificación , Proteasas de Cisteína/metabolismo , Micelas , Proteínas Recombinantes/metabolismo , Espectrometría de Fluorescencia
6.
Langmuir ; 31(1): 338-49, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25495869

RESUMEN

The prevention of aggregation during renaturation of urea-denatured carbonic anhydrase B (CAB) via hydrophobic and Coulomb association with anionic polymers was studied in mixed solutions of CAB and amphiphilic poly(acrylate) copolymers. The polymers were derivatives of a parent poly(acrylic acid) randomly grafted with hydrophobic side groups (either 3 mol % octadecyl group, or 1-5 mol % alkylamidoazobenzene photoresponsive groups). CAB:polymer complexes were characterized by light scattering and fluorescence correlation spectroscopy in aqueous buffers (pH 7.75 or 5.9). Circular dichroism and enzyme activity assays enabled us to study the kinetics of renaturation. All copolymers, including the hydrophilic PAA parent chain, provided a remarkable protective effect against CAB aggregation during renaturation, and most of them (but not the octadecyl-modified one) markedly enhanced the regain of activity as compared to CAB alone. The significant role of Coulomb binding in renaturation and comparatively the lack of efficacy of hydrophobic association was highlighted by measurements of activity regain before and after in situ dissociation of hydrophobic complexes (achieved by phototriggering the polarity of azobenzene-modified polymers under exposure to UV light). In the presence of polymers (CAB:polymer of 1:1 w/w ratio) at concentration ∼0.6 g L(-1), the radii of the largest complexes were similar to the radii of the copolymers alone, suggesting that the binding of CAB involves one or a few polymer chain(s). These complexes dissociated by dilution (0.01 g L(-1)). It is concluded that prevention of irreversible aggregation and activity recovery were achieved when marginally stable complexes are formed. Reaching a balanced stability of the complex plays the main role in CAB renaturation, irrespective of the nature of the binding (by Coulomb association, with or without contribution of hydrophobic association).


Asunto(s)
Resinas Acrílicas/química , Compuestos Azo/química , Anhidrasas Carbónicas/química , Resinas Acrílicas/farmacología , Animales , Compuestos Azo/farmacología , Bioensayo , Anhidrasas Carbónicas/efectos de los fármacos , Dicroismo Circular , Humanos , Interacciones Hidrofóbicas e Hidrofílicas , Estructura Molecular , Renaturación de Proteína , Solubilidad
7.
Protein Expr Purif ; 105: 23-32, 2015 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-25286401

RESUMEN

Anti-IZUMO1PFF VHH (variable domain of camelid heavy chain antibody) clones, N6 and N15, from immunized alpaca (Lama pacos) phage library were efficiently expressed and their VHH products were secreted into the culture medium of Brevibacillus choshinensis HPD31-SP3, e.g., at a level of 26-95mg in 100ml conventional flask culture. With a 3-L scale fed-batch culture for 65h, the N15 VHH protein with C-terminal His-tag was produced at ∼3g/l culture medium. The N6 and N15 proteins were easily purified to apparent homogeneity by cation exchange and Ni-affinity chromatographies. Both proteins showed specific antigen-binding activity by ELISA and high antigen binding affinity, KD=6.0-8.6nM, by surface plasmon resonance analysis. Size exclusion chromatography-multi-angle laser light scattering analysis revealed that N6 and N15 proteins purified were exclusively monomeric form in phosphate buffered saline. CD spectrum showed beta-sheet rich structure, consistent with a typical antibody structure and also suggested aromatic-aromatic interactions, as indicated by a positive peak at 232nm. Thermal melting analysis of the N15 protein with C-terminal His-tag demonstrated a clear thermal transition with a Tm at 67°C. The heat-denatured sample recovered antigen binding activity upon cooling, indicating a reversible denaturation.


Asunto(s)
Anticuerpos/química , Brevibacillus/genética , Proteínas Recombinantes/química , Anticuerpos de Dominio Único/química , Anticuerpos/genética , Anticuerpos/aislamiento & purificación , Anticuerpos/metabolismo , Renaturación de Proteína , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Anticuerpos de Dominio Único/genética , Anticuerpos de Dominio Único/aislamiento & purificación , Anticuerpos de Dominio Único/metabolismo
8.
Protein Expr Purif ; 107: 13-9, 2015 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-25462808

RESUMEN

Integrins are a family of transmembrane receptors and among their members, integrin ß1 is one of the best known. It plays a very important role in cell adhesion/migration and in cancer metastasis. Preparation of integrin ß1 has a great potential value especially in studies focused on its function. To this end, recombinant plasmids were constructed containing DNA segments representing 454 amino acids of the N-terminal of integrin ß1. The recombinant plasmid was transformed into Escherichiacoli BL21 (DE3) cells and after induction by isopropyl-ß-D-thiogalactopyranoside (IPTG), the recombinant protein (molecular weight: 53 kD) was expressed, mainly in the form of inclusion bodies. The inclusion bodies were solubilized by 8M urea solution then purified by nickel affinity chromatography. The recombinant protein was renatured by a stepwise dialysis and finally dissolved in phosphate buffered saline. The final yield was approximately 5.4 mg/L of culture and the purity of the renatured recombinant protein was greater than 98% as assessed by SDS-PAGE. The integrity of the protein was shown by Western blot using monoclonal antibodies against his-tag and integrin ß1. Its secondary structure was verified as native by circular dichroism spectra and the bioactivity of the recombinant protein was displayed through the conformation switch under Mn(2+) stimulation.


Asunto(s)
Escherichia coli/genética , Cuerpos de Inclusión/química , Integrina beta1/química , Integrina beta1/aislamiento & purificación , Clonación Molecular , Escherichia coli/química , Escherichia coli/metabolismo , Expresión Génica , Humanos , Cuerpos de Inclusión/genética , Cuerpos de Inclusión/metabolismo , Integrina beta1/genética , Integrina beta1/metabolismo , Renaturación de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo
9.
Genet Mol Res ; 14(3): 7782-92, 2015 Jul 14.
Artículo en Inglés | MEDLINE | ID: mdl-26214459

RESUMEN

It is expensive to induce experimental autoimmune myasthenia gravis (EAMG) by active immunity, and difficult to obtain natural acetylcholine receptor (AChR). We sought a new method of inducing EAMG by immunizing rats with artificially synthesized AChR. The AChR mRNA in TE671 cells was extracted and reverse transcribed. The inclusion body was purified and protein concentration was determined, and the EAMG animal model was used for induction. The serum was extracted from rat blood. The antibody titer was determined using enzyme-linked immunosorbant assay (ELISA). The concentration of decay accelerating factor (DAF) in the rat serum was determined by ELISA, and the metabolism of serum rDAF was determined by western blot. We evaluated the inhibition of rDAF by determining the 50% complement hemolysis unit in the rat serum. The extracellular domain (ECD) nucleotide sequence clone produced by polymerase chain reaction was completely consistent with that in the human gene bank; it was induced by isopropyl ß-D-1-thiogalactopyranoside to express the protein after insertion into vector pET16b. Sodium dodecyl sulfate polyacrylamide gel electrophoresis demonstrated that the inclusion body protein was the exact target. The ECD protein was able to bind with mAb35 after dialysis and renaturation, which demonstrated protein activity. The soluble ECD protein was used to immunize rats and obtain the EAMG models. The inhibitory effect of the complement was unsatisfactory owing to high decay rate after rDAF injection into the EAMG models. It is easy to induce the EAMG model by obtaining the AChRTEα1 subunit ECD protein using the substitution method.


Asunto(s)
Antígenos CD55/uso terapéutico , Miastenia Gravis Autoinmune Experimental/tratamiento farmacológico , Fármacos Neuroprotectores/uso terapéutico , Animales , Antígenos CD55/administración & dosificación , Antígenos CD55/sangre , Modelos Animales de Enfermedad , Electroforesis en Gel de Poliacrilamida , Ensayo de Inmunoadsorción Enzimática , Femenino , Humanos , Inyecciones Intravenosas , Miastenia Gravis Autoinmune Experimental/sangre , Miastenia Gravis Autoinmune Experimental/patología , Fármacos Neuroprotectores/administración & dosificación , Fármacos Neuroprotectores/farmacología , Renaturación de Proteína/efectos de los fármacos , Estructura Terciaria de Proteína , Ratas Endogámicas Lew , Proteínas Recombinantes/metabolismo , Solubilidad
10.
Amino Acids ; 46(1): 153-65, 2014 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-24233063

RESUMEN

Protein folding liquid chromatography (PFLC)is a powerful tool for protein refolding with simultaneous purification. We review its recent progress in liquid chromatography and molecular biology, primarily involving the validation of PFLC refolding of proteins containing multiple disulphide bonds, the application of mixed-mode chromatography, PFLC in molecular biology. Representative examples are described.


Asunto(s)
Renaturación de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/aislamiento & purificación , Cromatografía Liquida/métodos
11.
Proc Natl Acad Sci U S A ; 108(20): 8206-11, 2011 May 17.
Artículo en Inglés | MEDLINE | ID: mdl-21525416

RESUMEN

Molecular chaperones are proteins that assist the folding, unfolding, and remodeling of other proteins. In eukaryotes, heat shock protein 90 (Hsp90) proteins are essential ATP-dependent molecular chaperones that remodel and activate hundreds of client proteins with the assistance of cochaperones. In Escherichia coli, the activity of the Hsp90 homolog, HtpG, has remained elusive. To explore the mechanism of action of E. coli Hsp90, we used in vitro protein reactivation assays. We found that E. coli Hsp90 promotes reactivation of heat-inactivated luciferase in a reaction that requires the prokaryotic Hsp70 chaperone system, known as the DnaK system. An Hsp90 ATPase inhibitor, geldanamycin, inhibits luciferase reactivation demonstrating the importance of the ATP-dependent chaperone activity of E. coli Hsp90 during client protein remodeling. Reactivation also depends upon the ATP-dependent chaperone activity of the DnaK system. Our results suggest that the DnaK system acts first on the client protein, and then E. coli Hsp90 and the DnaK system collaborate synergistically to complete remodeling of the client protein. Results indicate that E. coli Hsp90 and DnaK interact in vivo and in vitro, providing additional evidence to suggest that E. coli Hsp90 and the DnaK system function together.


Asunto(s)
Proteínas de Escherichia coli/fisiología , Proteínas HSP70 de Choque Térmico/fisiología , Proteínas HSP90 de Choque Térmico/fisiología , Renaturación de Proteína , Adenosina Trifosfatasas/metabolismo , Proteínas de Escherichia coli/química , Proteínas HSP70 de Choque Térmico/química , Proteínas HSP90 de Choque Térmico/química , Luciferasas/química , Modelos Moleculares , Unión Proteica , Desnaturalización Proteica , Pliegue de Proteína , Estructura Cuaternaria de Proteína
12.
Biochemistry ; 52(6): 1011-8, 2013 Feb 12.
Artículo en Inglés | MEDLINE | ID: mdl-23331070

RESUMEN

The role of bacterial DnaJ protein as a cochaperone of DnaK is strongly appreciated. Although DnaJ unaccompanied by DnaK can bind unfolded as well as native substrate proteins, its role as an individual chaperone remains elusive. In this study, we demonstrate that DnaJ binds a model non-native substrate with a low nanomolar dissociation constant and, more importantly, modulates the structure of its non-native state. The structural modulation achieved by DnaJ is different compared to that achieved by the DnaK-DnaJ complex. The nature of structural modulation exerted by DnaJ is suggestive of a unique unfolding activity on the non-native substrate by the chaperone. Furthermore, we demonstrate that the zinc binding motif along with the C-terminal substrate binding domain of DnaJ is necessary and sufficient for binding and the subsequent binding-induced structural alterations of the non-native substrate. We hypothesize that this hitherto unknown structural alteration of non-native states by DnaJ might be important for its chaperoning activity by removing kinetic traps of the folding intermediates.


Asunto(s)
Proteínas de Escherichia coli/química , Proteínas de Escherichia coli/metabolismo , Escherichia coli/metabolismo , Proteínas del Choque Térmico HSP40/química , Proteínas HSP70 de Choque Térmico/metabolismo , Chaperonas Moleculares , Fragmentos de Péptidos/metabolismo , Proteínas de Escherichia coli/genética , Transferencia Resonante de Energía de Fluorescencia , Proteínas del Choque Térmico HSP40/genética , Proteínas del Choque Térmico HSP40/metabolismo , Hidrólisis , Immunoblotting , Inmunoprecipitación , Cinética , Modelos Moleculares , Mutación/genética , Unión Proteica , Conformación Proteica , Desnaturalización Proteica , Pliegue de Proteína , Renaturación de Proteína
13.
Biochim Biophys Acta ; 1823(6): 1092-101, 2012 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-22504172

RESUMEN

The activator of Hsp90 ATPase, Aha1, is an Hsp90 co-chaperone that has been suggested to act as a general stimulator of Hsp90 function. In this report, we have characterized the interaction of Aha1 with Hsp90 and its co-chaperones in rabbit reticulocyte lysate (RRL) and in HeLa cell extracts. Complexes formed by Aha1 with Hsp90 in RRL were stabilized by molybdate and contained the co-chaperones FKBP52 and p23/Sba1, but lacked HOP/Sti1 and Cdc37. Aha1 complexes isolated from HeLa cell extracts also contained Hsp70 and DNAJA1. Over-expression of Aha1 has been reported to stimulate the activity of v-Src and steroid hormone receptors ectopically expressed in yeast, however, no interaction between Aha1 and nascent v-Src or the progesterone receptor could be detected in RRL. Contrary to expectations, over-expression of Aha1 also inhibited the rate of Hsp90-dependent refolding of denatured luciferase. A number of potential client proteins that specifically associated with Aha1 were identified by liquid chromatography/ tandem mass spectrometry (LC-MS/MS) and verified by Western blotting. The proteins identified suggest that Aha1 may play roles in modulating RNA splicing and DNA repair, in addition to other cellular processes.


Asunto(s)
Proteínas HSP90 de Choque Térmico/metabolismo , Chaperonas Moleculares/metabolismo , Complejos Multiproteicos/metabolismo , Animales , Extractos Celulares , Proteínas HSP90 de Choque Térmico/antagonistas & inhibidores , Células HeLa , Humanos , Luciferasas/metabolismo , Proteína Oncogénica pp60(v-src)/metabolismo , Unión Proteica , Renaturación de Proteína , Conejos , Receptores de Progesterona/metabolismo
14.
Biol Chem ; 394(8): 995-1004, 2013 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-23629522

RESUMEN

In response to advances in proteomics research and the use of proteins in medical and biotechnological applications, recombinant protein production and the design of specific protein characteristics and functions has become a widely used technology. In this context, protein fusion tags have been developed as indispensable tools for protein expression, purification, and the design of functionalized surfaces or artificially bifunctional proteins. Here we summarize how positively or negatively charged polyionic fusion peptides with or without an additional cysteine can be used as protein tags for protein expression and purification, for matrix-assisted refolding of aggregated protein, and for coupling of proteins either to technologically relevant matrices or to other proteins. In this context we used cysteine-containing polyionic fusion peptides for the design of immunotoxins. In general, polyionic fusion tags can be considered as a multifunctional module in protein technology.


Asunto(s)
Cisteína/genética , Péptidos/genética , Proteínas Recombinantes de Fusión/genética , Secuencia de Aminoácidos , Animales , Clonación Molecular/métodos , Cisteína/química , Cisteína/aislamiento & purificación , Cisteína/metabolismo , Humanos , Inmunotoxinas/química , Inmunotoxinas/genética , Inmunotoxinas/aislamiento & purificación , Inmunotoxinas/metabolismo , Iones/química , Iones/aislamiento & purificación , Iones/metabolismo , Modelos Moleculares , Datos de Secuencia Molecular , Péptidos/química , Péptidos/aislamiento & purificación , Péptidos/metabolismo , Renaturación de Proteína , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/aislamiento & purificación , Proteínas Recombinantes de Fusión/metabolismo
15.
Nat Med ; 12(1): 128-32, 2006 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-16327803

RESUMEN

Many heat-shock proteins (Hsp) are members of evolutionarily conserved families of chaperone proteins that inhibit the aggregation of unfolded polypeptides and refold denatured proteins, thereby remedying phenotypic effects that may result from protein aggregation or protein instability. Here we report that the mitochondrial chaperone Hsp40, also known as Dnaja3 or Tid1, is differentially expressed during cardiac development and pathological hypertrophy. Mice deficient in Dnaja3 developed dilated cardiomyopathy (DCM) and died before 10 weeks of age. Progressive respiratory chain deficiency and decreased copy number of mitochondrial DNA were evident in cardiomyocytes lacking Dnaja3. Profiling of Dnaja3-interacting proteins identified the alpha-subunit of DNA polymerase gamma (Polga) as a client protein. These findings suggest that Dnaja3 is crucial for mitochondrial biogenesis, at least in part, through its chaperone activity on Polga and provide genetic evidence of the necessity for mitochondrial Hsp40 in preventing DCM.


Asunto(s)
Cardiomiopatía Dilatada/patología , ADN Polimerasa Dirigida por ADN/metabolismo , Proteínas del Choque Térmico HSP40/química , Proteínas del Choque Térmico HSP40/fisiología , Animales , Aorta/patología , Cardiomiopatía Dilatada/prevención & control , Línea Celular , ADN/metabolismo , ADN Polimerasa gamma , ADN Mitocondrial/metabolismo , Transporte de Electrón , Complejo IV de Transporte de Electrones/metabolismo , Evolución Molecular , Proteínas Fluorescentes Verdes/metabolismo , Proteínas del Choque Térmico HSP40/genética , Proteínas del Choque Térmico HSP40/metabolismo , Humanos , Immunoblotting , Ratones , Ratones Endogámicos C57BL , Ratones Noqueados , Ratones Transgénicos , Microscopía Fluorescente , Mitocondrias/metabolismo , Miocitos Cardíacos/metabolismo , Unión Proteica , Desnaturalización Proteica , Pliegue de Proteína , Renaturación de Proteína , Estructura Terciaria de Proteína , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Factores de Tiempo , Transfección
16.
Artículo en Inglés | MEDLINE | ID: mdl-23385744

RESUMEN

Variable heavy domains derived from the heavy-chain-only antibodies found in camelids (V(H)H domains) are known for their thermal stability. Here, the structure of A9, an anti-cholera toxin V(H)H domain (K(d) = 77 ± 5 nM) that has an unusually low melting temperature of 319.9 ± 1.6 K, is reported. The CDR3 residues of A9 form a ß-hairpin that is directed away from the former V(H)-V(L) interfacial surface, exposing hydrophobic residues to the solvent. A DALI structural similarity search showed that this CDR3 conformation is uncommon.


Asunto(s)
Camélidos del Nuevo Mundo/inmunología , Toxina del Cólera/química , Frío , Cadenas Pesadas de Inmunoglobulina/química , Región Variable de Inmunoglobulina/química , Temperatura de Transición , Animales , Dicroismo Circular , Cristalografía por Rayos X , Renaturación de Proteína , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína
17.
Appl Microbiol Biotechnol ; 97(3): 1223-30, 2013 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-22825834

RESUMEN

Conotoxins are a diverse array of small peptides mostly with multiple disulfide bridges. These peptides become an increasing significant source of neuro-pharmacological probes and drugs as a result of the high selectivity for ion channels and receptors. Conotoxin GeXIVAWT (CTX-GeXIVAWT) is a 28-amino acid peptide containing five cysteines isolated from the venom of Conus generalis. Here, we present a simple and fast strategy of producing disulfide-rich conotoxins via recombinant expression. The codes of novel conotoxin gene GeXIVAWT were optimized and generated two pairs of primers by chemical synthesis for construction of expression vector. Recombinant expression vector pET22b(+)-GeXIVAWT fused with pelB leader and His-tag was successfully expressed as an insoluble body in Escherichia coli BL21(DE3) cells. Recombinant conotoxin GeXIVAWT (rCTX-GeXIVAWT) was obtained by dissolving the insoluble bodies and purifying with a Ni-NTA affinity column, which was further purified using reverse-phase high-performance liquid chromatography and identified by matrix-assisted laser desorption/ionization-time of flight mass spectrometry. The rCTX-GeXIVAWT renatured in vitro could inhibited the growth of Sf9 cell with biological activity assay. This expression system may prove valuable for future structure-function studies of conotoxins.


Asunto(s)
Conotoxinas/metabolismo , Conotoxinas/toxicidad , Renaturación de Proteína , Animales , Supervivencia Celular/efectos de los fármacos , Cromatografía de Afinidad , Cromatografía Líquida de Alta Presión , Conotoxinas/genética , Conotoxinas/aislamiento & purificación , Escherichia coli/genética , Escherichia coli/metabolismo , Expresión Génica , Vectores Genéticos , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/toxicidad , Células Sf9 , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción
18.
Fish Physiol Biochem ; 39(6): 1657-63, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-23748965

RESUMEN

Purified juvenile catfish (Clarias gariepinus) glutathione transferase (cgGST) was denatured in vitro and renatured in the absence and presence of different concentrations of endogenous or xenobiotic model substrates. Protein transitions during unfolding and refolding were monitored by activity measurement as well as changes in protein conformation using UV difference spectra at 230 nm. Gdn-HCl at 0.22 M caused 50 % inactivation of the enzyme and at 1.1 M, the enzyme was completely unfolded. Refolding of cgGST main isozyme was not completely reversible at higher concentrations of Gdn-HCl and is dependent on protein concentration. An enzyme concentration of 30 µg/ml yielded 40 % percentage residual activity in the presence of glutathione (GSH), regardless of the concentration that was present as opposed to 30 % obtained in its absence. The xenobiotic model substrate, lindane, appears to have no effect on the refolding of the enzyme. In summary, our results show that GSH assists in the refolding of cgGST in a concentration-independent manner and may be involved in the same function in vivo whereas the xenobiotic model substrate does not.


Asunto(s)
Bagres/metabolismo , Glutatión Transferasa/metabolismo , Glutatión/metabolismo , Hexaclorociclohexano/toxicidad , Xenobióticos/toxicidad , Animales , Guanidina , Hexaclorociclohexano/metabolismo , Desnaturalización Proteica , Renaturación de Proteína , Xenobióticos/metabolismo
19.
Biochemistry ; 51(11): 2172-80, 2012 Mar 20.
Artículo en Inglés | MEDLINE | ID: mdl-22352808

RESUMEN

We have developed a multiwell-based protein aggregation assay to study the kinetics of insulin adsorption and aggregation on hydrophobic surfaces and to investigate the molecular mechanisms involved. Protein-surface interaction progresses in two phases: (1) a lag phase during which proteins adsorb and prefibrillar aggregates form on the material surface and (2) a growth phase during which amyloid fibers form and then are progressively released into solution. We studied the effect of three bacterial chaperones, DnaK, DnaJ, and ClpB, on insulin aggregation kinetics. In the presence of ATP, the simultaneous presence of DnaK, DnaJ, and ClpB allows good protection of insulin against aggregation. In the absence of ATP, DnaK alone is able to prevent insulin aggregation. Furthermore, DnaK binds to insulin adsorbed on hydrophobic surfaces. This process is slowed in the presence of ATP and can be enhanced by the cochaperone DnaJ. The peptide LVEALYL, derived from the insulin B chain, is known to promote fast aggregation in a concentration- and pH-dependent manner in solution. We show that it also shortens the lag phase for insulin aggregation on hydrophobic surfaces. As this peptide is also a known DnaK substrate, our data indicate that the peptide and the chaperone might compete for a common site during the process of insulin aggregation on hydrophobic surfaces.


Asunto(s)
Amiloide/química , Proteínas Bacterianas/química , Insulina/metabolismo , Chaperonas Moleculares/química , Adenosina Trifosfato/metabolismo , Amiloide/metabolismo , Proteínas Bacterianas/metabolismo , Proteínas de Choque Térmico/química , Proteínas de Choque Térmico/metabolismo , Humanos , Interacciones Hidrofóbicas e Hidrofílicas , Insulina/química , Cinética , Chaperonas Moleculares/metabolismo , Renaturación de Proteína , Propiedades de Superficie
20.
BMC Biotechnol ; 12: 91, 2012 Nov 28.
Artículo en Inglés | MEDLINE | ID: mdl-23192001

RESUMEN

BACKGROUND: The development of vectors for cell-specific gene delivery is a major goal of gene therapeutic strategies. Transferrin receptor (TfR) is an endocytic receptor and identified as tumor relative specific due to its overexpression on most tumor cells or tissues, and TfR binds and intakes of transferrin-iron complex. We have previously generated an anti-TfR single-chain variable fragments of immunoglobulin (scFv) which were cloned from hybridoma cell line producing antibody against TfR linked with a 20 aa-long linker sequence (G4S)4. In the present study, the anti-TfR single-chain antibody (TfRscFv) was fused to DNA-binding domain of the yeast transcription factor GAL4. The recombinant fusion protein, designated as TfRscFv-GAL4, is expected to mediate the entry of DNA-protein complex into targeted tumor cells. RESULTS: Fusion protein TfRscFv-GAL4 was expressed in an E. coli bacterial expression system and was recovered from inclusion bodies with subsequent purification by metal-chelate chromatography. The resulting proteins were predominantly monomeric and, upon refolding, became a soluble biologically active bifunctional protein. In biological assays, the antigen-binding activity of the re-natured protein, TfRscFv-GAL4, was confirmed by specific binding to different cancer cells and tumor tissues. The cell binding rates, as indicated by flow cytometry (FCM) analysis, ranged from 54.11% to 8.23% in seven different human carcinoma cell lines. It showed similar affinity and binding potency as those of parent full-length mouse anti-TfR antibody. The positive binding rates to tumor tissues by tissue microarrays (TMA) assays were 75.32% and 63.25%, but it showed weakly binding with hepatic tissue in 5 cases, and normal tissues such as heart, spleen, adrenal cortex blood vessel and stomach. In addition, the re-natured fusion protein TfRscFv-GAL4 was used in an ELISA with rabbit anti-GAL4 antibody. The GAL4-DNA functional assay through the GAL4 complementary conjugation with the GAL4rec-GFP-pGes plasmid to verify the GLA4 activity and GAL4rec-recognized specificity functions. It also shows the complex, TfRscFv-GAL4-GAL4rec-GFP-pGes, could be taken into endochylema to express the green fluorescent protein (GFP) with 8 to 10-fold transfection efficiency. CONCLUSIONS: Results of our study demonstrated that the biofunctianality of genetically engineered fusion protein, TfRscFv-GAL4, was retained, as the fusion protein could both carry the plasmid of GAL4rec-pGes and bind TfR on tumour cells. This product was able to transfect target cells effectively in an immuno-specific manner, resulting in transient gene expression. This protein that can be applied as an effective therapeutic and diagnostic delivery to the tumor using endogenous membrane transport system with potential widespread utility.


Asunto(s)
Proteínas de Unión al ADN/metabolismo , Receptores de Transferrina/inmunología , Proteínas de Saccharomyces cerevisiae/metabolismo , Anticuerpos de Cadena Única/metabolismo , Factores de Transcripción/metabolismo , Animales , Neoplasias de la Mama/patología , Línea Celular Tumoral , Proteínas de Unión al ADN/genética , Escherichia coli/metabolismo , Femenino , Citometría de Flujo , Vectores Genéticos/genética , Vectores Genéticos/metabolismo , Proteínas Fluorescentes Verdes/genética , Proteínas Fluorescentes Verdes/metabolismo , Células HL-60 , Células HeLa , Células Hep G2 , Humanos , Células MCF-7 , Ratones , Plásmidos/genética , Plásmidos/metabolismo , Pliegue de Proteína , Renaturación de Proteína , Proteínas Recombinantes de Fusión/biosíntesis , Proteínas Recombinantes de Fusión/genética , Saccharomyces cerevisiae/metabolismo , Proteínas de Saccharomyces cerevisiae/genética , Anticuerpos de Cadena Única/genética , Neoplasias Gástricas/patología , Análisis de Matrices Tisulares , Factores de Transcripción/genética
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