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1.
Methods Enzymol ; 323: 207-30, 2000.
Artigo em Inglês | MEDLINE | ID: mdl-10944754

RESUMO

This chapter has described a bioenergetic analysis of the interaction of sCD4 with an IgG1 and two IgG4 derivatives of an anti-sCD4 MAb. The MAbs have identical VH and VL domains but differ markedly in their CH and CL domains, raising the question of whether their antigen-binding chemistries are altered. We find the sCD4-binding kinetics and thermodynamics of the MAbs are indistinguishable, which indicates rigorously that the molecular details of the binding interactions are the same. We also showed the importance of using multiple biophysical methods to define the binding model before the bioenergetics can be appropriately interpreted. Analysis of the binding thermodynamics and kinetics suggests conformational changes that might be coupled to sCD4 binding by these MAbs are small or absent.


Assuntos
Anticorpos Monoclonais/química , Antígenos CD4/química , Antígenos CD4/imunologia , Imunoglobulina G/química , Sítios de Ligação de Anticorpos , Calorimetria/métodos , Varredura Diferencial de Calorimetria/métodos , Variação Genética , Humanos , Fragmentos Fab das Imunoglobulinas/química , Fragmentos Fc das Imunoglobulinas/química , Cadeias Pesadas de Imunoglobulinas/química , Cadeias Leves de Imunoglobulina/química , Cinética , Substâncias Macromoleculares , Microquímica/métodos , Modelos Moleculares , Conformação Proteica , Desnaturação Proteica , Ressonância de Plasmônio de Superfície/métodos , Termodinâmica
2.
Thromb Haemost ; 82(5): 1443-5, 1999 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-10595635

RESUMO

An inhibitory anti-factor IX/IXa antibody (BC2) has been investigated as an anti-thrombotic agent in a rat venous thrombosis model. The treatment of rats post-injury with a single bolus dose of BC2 (3 mg/kg, i.v.) resulted in an approximately 4 fold reduction in venous thrombus mass (P = 0.043). This efficacy was matched by a minimal (<2.5 fold) prolongation of the aPTT and had no effect on the prothrombin time (PT). Heparin by comparison, given as a bolus followed by continuous infusion, at doses comparable in efficacy at reducing thrombus formation, prolonged the aPTT >50 fold. These results demonstrate that the anti-factor IX/IXa antibody (BC2), when compared to heparin, can effectively reduce venous thrombosis with less disruptive consequences on blood clotting.


Assuntos
Anticorpos Monoclonais/uso terapêutico , Fator IX/antagonistas & inibidores , Veia Cava Inferior , Trombose Venosa/prevenção & controle , Animais , Anticorpos Monoclonais/administração & dosagem , Anticorpos Monoclonais/imunologia , Especificidade de Anticorpos , Avaliação Pré-Clínica de Medicamentos , Epitopos/imunologia , Fator IX/imunologia , Fator IX/fisiologia , Fator IXa/imunologia , Heparina/administração & dosagem , Heparina/uso terapêutico , Infusões Intravenosas , Injeções Intravenosas , Masculino , Camundongos , Tempo de Tromboplastina Parcial , Estrutura Terciária de Proteína , Tempo de Protrombina , Ratos , Ratos Sprague-Dawley
3.
Thromb Res ; 100(1): 73-9, 2000 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-11053619

RESUMO

A humanized inhibitory anti-factor IX(a) antibody (SB 249417) has been compared to enoxaparin (Lovenox) in a rat model of arterial thrombosis. Pretreatment of rats with either SB 249417 (3.0 mg/kg, i. v.) or enoxaparin (30.0 mg/kg, i.v. or s.c.) resulted in comparable and significant reductions in thrombus formation. However, the efficacious dose of enoxaparin resulted in >30-fold increase in the aPTT over baseline, while the efficacious dose of SB 249417 prolonged the aPTT by only approximately 3-fold. Additionally, pretreatment with SB 249417 resulted in sustained blood flow and arterial patency throughout the experiment in >80% of rats treated. In contrast, <30% of rats pretreated with enoxaparin remained patent throughout the experiment. The data in this report indicate that the selective inhibition of factor IX(a) with the monoclonal antibody SB 249417 produces a superior antithrombotic profile to that of the low molecular weight heparin enoxaparin.


Assuntos
Anticorpos Monoclonais/farmacologia , Trombose das Artérias Carótidas/tratamento farmacológico , Doença das Coronárias/tratamento farmacológico , Enoxaparina/farmacologia , Fator IXa/imunologia , Fibrinolíticos/farmacologia , Animais , Anticorpos Monoclonais/uso terapêutico , Testes de Coagulação Sanguínea , Velocidade do Fluxo Sanguíneo/efeitos dos fármacos , Trombose das Artérias Carótidas/induzido quimicamente , Modelos Animais de Doenças , Relação Dose-Resposta a Droga , Enoxaparina/normas , Enoxaparina/uso terapêutico , Fibrinolíticos/normas , Fibrinolíticos/uso terapêutico , Heparina de Baixo Peso Molecular/imunologia , Heparina de Baixo Peso Molecular/farmacologia , Heparina de Baixo Peso Molecular/uso terapêutico , Humanos , Masculino , Ratos , Ratos Sprague-Dawley , Fatores de Tempo
5.
J Biol Chem ; 262(16): 7552-8, 1987 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-3584126

RESUMO

Heparin has been shown to exhibit lower affinity for the antithrombin-thrombin complex than for antithrombin alone (Carlstrom, A.-S., Lieden, K., and Bjork, I. (1977) Thromb. Res. 11, 785-797), suggesting that structural alterations in antithrombin may accompany its reaction with thrombin. The hydroxy-nitrobenzyl (HNB) group attached to a unique tryptophan has been used in the present study as an extrinsic probe for localization of conformational changes to the heparin-binding region within antithrombin III using immunochemical and spectral techniques. Site-specific modification of tryptophan-49 in antithrombin with the hydroxynitrobenzyl reagent blocks heparin binding to the protein and provides a chemical label in the heparin-binding region of the protein (Blackburn, M. N., Smith, R. L., Carson, J., and Sibley, C. C. (1984) J. Biol. Chem. 259, 939-941). Antibodies specific for the hydroxynitrobenzyl hapten, which bind to HNB-tryptophan-49 in antithrombin, were used to detect a change in conformation in the region of tryptophan-49 which occurs upon thrombin binding to antithrombin. This thrombin-induced structural change was also apparent from spectral perturbations which were detected with the environmentally sensitive HNB moiety. Thus, the HNB group was used as an immunochemical probe as well as a spectral reporter group to provide insight into an allosteric mechanism of control in the catalytic role of heparin. The thrombin-promoted alteration of the structure in the heparin-binding region is presumably responsible for recycling of heparin, allowing it to catalyze further reactions between antithrombin and thrombin.


Assuntos
Antitrombinas/metabolismo , Heparina/metabolismo , Trombina/metabolismo , Anticorpos , Complexo Antígeno-Anticorpo , Ensaio de Imunoadsorção Enzimática , Humanos , Cinética , Ligação Proteica , Conformação Proteica , Compostos de Sulfônio/farmacologia
6.
J Biol Chem ; 262(16): 7559-66, 1987 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-3584127

RESUMO

The role of antithrombin conformation in heparin-catalyzed inhibition of thrombin was investigated using antithrombins modified with the tryptophan reagent dimethyl (2-hydroxy-5-nitrobenzyl) sulfonium bromide (HNB). Affinity fractionation of HNB-labeled antithrombin (0.6-0.7 mol of HNB/mol of protein) on heparin-Sepharose using a linear salt gradient allowed separation of three singly labeled protein species and a fourth HNB-antithrombin species which co-eluted with unlabeled protein. Conformational alterations induced by heparin binding to each of the labeled antithrombins were assessed by spectroscopic techniques, including protein fluorescence, difference spectroscopy in the ultraviolet-visible range, and circular dichroism. Comparison of spectra of the labeled proteins in the presence and absence of added heparin indicated changes to occur in protein conformation at the sites of the bound HNB moieties and at aromatic amino acid residues within the protein matrix. These spectroscopic alterations mimicked changes induced by heparin in the native protein, but were reduced in magnitude. Rates of thrombin inactivation by the labeled antithrombins were measured over a wide range in both heparin concentration and inhibitor concentration to determine maximal rates of protease inactivation. The kinetic analysis indicated that each of these HNB-antithrombin derivatives, which undergo the heparin-induced changes to varying extents, can react with thrombin at the same maximal rate. Thus, this series of chemically modified antithrombin species demonstrated that the conformational change which is induced in antithrombin by heparin does not render the protein intrinsically more reactive toward thrombin.


Assuntos
Antitrombinas/metabolismo , Heparina/metabolismo , Trombina/metabolismo , Humanos , Cinética , Ligação Proteica , Conformação Proteica , Compostos de Sulfônio/farmacologia , Triptofano
7.
J Biol Chem ; 259(2): 935-8, 1984 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-6420409

RESUMO

Pyridoxal 5'-phosphate was used to selectively modify lysine residues on antithrombin III. Pyridoxal 5'-phosphate was incubated with antithrombin, and the Schiff base was reduced with sodium borohydride. A maximum of 3-4 pyridoxal 5'-phosphate groups per antithrombin molecule are bound at high concentrations of pyridoxal 5'-phosphate. A linear decrease in heparin cofactor activity was observed with the incorporation of the first three pyridoxyl phosphate groups. Modification in the presence of added heparin decreased the extent of labeling by 1-2 mol of pyridoxyl phosphate per mol of antithrombin and protected against the loss of heparin cofactor activity. To further examine the role of lysine residues in the interaction of antithrombin III with heparin, the protein was singly labeled with pyridoxyl phosphate and affinity fractionated on heparin-agarose. Three species, each containing approximately one pyridoxyl phosphate group per antithrombin, were obtained. Two of these derivatives had reduced affinity for heparin-agarose, exhibited decreased heparin cofactor activity, and did not show enhanced tryptophan fluorescence upon addition of heparin. The third derivatives possessed high affinity for heparin-agarose, retained native-like heparin cofactor activity, and when titrated with heparin gave a 30-35% increase in tryptophan fluorescence. Fluorescence emission spectra of the phosphopyridoxyl-antithrombin derivative that does not bind to heparin-agarose indicated fluorescence energy transfer from tryptophan to the bound phosphopyridoxyl moiety. These results indicate that 1-2 lysines are essential to heparin bonding and that these residues may be located near to the critical tryptophan (Blackburn, M. N., and Sibley, C. C. (1980) J. Biol. Chem. 255, 824-826) in the heparin-binding domain of antithrombin III.


Assuntos
Antitrombina III/metabolismo , Heparina/metabolismo , Lisina/metabolismo , Fosfato de Piridoxal/metabolismo , Sítios de Ligação , Cromatografia de Afinidade , Humanos , Espectrometria de Fluorescência
8.
J Biol Chem ; 255(3): 824-6, 1980 Feb 10.
Artigo em Inglês | MEDLINE | ID: mdl-7356660

RESUMO

Chemical modification of antithrombin III, the major plasma protease inhibitor, with the tryptophan reagent dimethy(2-hydroxy-5-nitrobenzyl) sulfonium bromide, results in the incorporation of one hydroxynitrobenzyl moiety per molecule of antithrombin III. The derivatized inhibitor does not exhibit the heparin-promoted enhancement in rate of thrombin inactivation which is characteristic of the native molecule. However, the rates of thrombin inactivation in the absence of heparin are identical with native and derivatized inhibitors, indicating that the site of protease . inhibitor complex formation is not altered. Unlike native antithrombin III, the modified inhibitor does not bind to a heparin-agarose affinity column. When the modification reaction was performed with added heparin, the extent of modification was decreased and the heparin-promoted enhancement of thrombin inactivation was preserved. These results indicate that the integrity of a specific tryptophan residue is critical to the binding of heparin to antithrombin III.


Assuntos
Antitrombina III , Heparina , Triptofano , Animais , Bovinos , Cinética , Ligação Proteica , Trombina/metabolismo
9.
Biochemistry ; 15(6): 1316-23, 1976 Mar 23.
Artigo em Inglês | MEDLINE | ID: mdl-766834

RESUMO

Extension modification of aspartate transcarbamoylase from Escherichia coli with pyridoxal 5'-phosphate followed by reduction of the Schiff base with sodium borohydride caused only partial inactivation of the enzyme. Under comparable conditions, virtually complete loss of enzyme activity is obtained with the free catalytic subunits. The pyridoxylated, intact enzyme containing more than 60% of the bound pyridoxamine phosphate on the regulatory subunits exhibited considerable cooperativity, inhibition by CTP, and activation by ATP. When the modification was performed in the presence of the ligands which bind to the catalytic sites, the resulting product had virtually the same activity as the native enzyme, but it exhibited significantly reduced cooperativity and virtually no inhibition by CTP. The pyridoxylation of the regulatory subunits within the intact enzyme was enhanced markedly in the presence of ligands as compared with the reactivity of these subunits when the modificaiton was performed in the absence of the active site ligands. Both types of pyridoxylated derivatives exhibited the ligand-promoted conformational changes characteristic of the native enzyme. Spectrophotometric studies of inactive pyridoxylated catalytic subunits and intact enzyme showed that the substrate (carbamoyl phosphate) bound strongly but that the substrate analogue (succinate) did not bind. Both the pyridoxylation experiments in the presence and absence of ligands and the spectral behavior of a hybrid containing one native and one pyridoxylated catalytic subunit indicated that ligand binding was accompanied by a conformational change in the intact enzyme molecules.


Assuntos
Aspartato Carbamoiltransferase/metabolismo , Fosfato de Piridoxal/farmacologia , Regulação Alostérica , Sítio Alostérico , Escherichia coli/enzimologia , Ligação Proteica , Espectrofotometria Ultravioleta , Succinatos
10.
J Biol Chem ; 260(1): 610-5, 1985 Jan 10.
Artigo em Inglês | MEDLINE | ID: mdl-3965464

RESUMO

Two distinct forms of antithrombin III were isolated by chromatography of normal human plasma on heparin-Sepharose. The predominant antithrombin species present (AT-III alpha), which eluted from the affinity column in 1 M NaCl, was identified as the antithrombin III form which has been previously characterized. Ionic strength of the buffer was increased to elute a variant form of antithrombin III, designated as AT-III beta. The molecular weight of AT-III beta is less than that of AT-III alpha, but physicochemical studies do not indicate measureable differences in the polypeptide portion of the proteins. Carbohydrate determination revealed the sole detectable structural difference in the two antithrombins: levels of hexosamine, neutral sugars, and sialic acid in AT-III beta were all 25-30% less than in AT-III alpha. Kinetic studies of thrombin inactivation by both antithrombins, in the presence of nonsaturating amounts of heparin, indicated that AT-III beta inhibited thrombin more rapidly. AT-III beta is also distinguishable from AT-III alpha on the basis of heparin-binding affinity estimated from titration of protein fluorescence with heparin. Thus, antithrombin III exists as two molecular entities in human plasma which differ both structurally, in carbohydrate content, and functionally, in their heparin-binding behavior.


Assuntos
Antitrombina III/genética , Variação Genética , Heparina/metabolismo , Aminoácidos/análise , Antitrombina III/isolamento & purificação , Antitrombina III/metabolismo , Carboidratos/análise , Ensaio de Imunoadsorção Enzimática , Humanos , Cinética , Ligação Proteica
11.
J Biol Chem ; 262(16): 7567-74, 1987 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-3584128

RESUMO

Heparin binding to rabbit histidine-rich glycoprotein (HRG) was studied in a purified system, allowing for determination of a heparin dissociation constant of approximately 5.5 X 10(-8) M for the interaction with HRG at pH 7.0. The strong interaction between heparin and HRG was demonstrated to be competitive with the binding of both antithrombin and thrombin to the heparin chain. HRG was further tested as a modulator of the anticoagulant activity of heparin by comparing rates of the heparin-catalyzed reaction between antithrombin and thrombin in the presence and absence of added HRG. The heparin-antithrombin-thrombin reaction was modeled using the formalism of a two-substrate enzyme-catalyzed reaction with heparin as the enzyme and HRG analyzed as an enzyme inhibitor. HRG was shown to compete with both antithrombin and thrombin for binding to heparin by this kinetic analysis. Thus, both the kinetic and heparin-binding data indicate that the mechanism by which HRG modulates heparin anticoagulant activity involves competition for heparin with both the inhibitor and the protease. Inhibition by HRG of the heparin-catalyzed reaction was found to be highly dependent on pH, with a sharp increase in inhibition from about 15% to greater than 90% observed as pH was lowered from 7.4 to 7.0. Since little change in the rate of the heparin-catalyzed inhibition of thrombin by antithrombin occurs in this pH region, the dramatic change in HRG inhibition seen upon pH titration may reflect increasing ionic interaction between heparin and HRG due to the protonation of histidine residues which occurs in this pH region.


Assuntos
Antitrombinas/metabolismo , Heparina/farmacologia , Proteínas/fisiologia , Trombina/metabolismo , Ligação Competitiva , Heparina/metabolismo , Humanos , Cinética , Espectrometria de Fluorescência
12.
Biochemistry ; 26(23): 7477-82, 1987 Nov 17.
Artigo em Inglês | MEDLINE | ID: mdl-3427089

RESUMO

Rabbit histidine-rich glycoprotein (HRG, 94 kDa) binds heparin with high affinity (apparent Kd 60-110 nM). Eosin Y (1 equiv) bound to HRG was used as a reporter group to monitor associations of HRG with heparins of molecular mass 10, 17.5, and 30 kDa. The stoichiometries of the heparin-HRG complexes were determined by fluorescence and absorbance measurements as well as by analytical ultracentrifugation. Two types of complex form: complexes of 1 heparin:1 HRG and of 1 heparin:2 HRG. The 1:2 complex formation requires a minimum heparin chain length since 17.5-kDa but not 10-kDa heparin binds two HRG molecules. The formation of the 1:2 complexes of the larger heparin fractions is enhanced by divalent copper or zinc (1-10 equiv) bound to HRG. However, metal is not required for complex formation since all sizes of heparin examined interact tightly with HRG in the presence of ethylenediaminetetraacetic acid. Between 0.1 and 0.3 M ionic strength, both 1:1 and 1:2 complexes of heparin with HRG are progressively destabilized. No heparin-HRG complex is found at ionic strengths of 0.5 M. Between pH 8.5 and pH 6.5 both 1:2 and 1:1 complexes are found with 17.5-kDa heparin, but at pH 5.5 only 1:1 complexes are formed. The heparin-HRG interaction is progressively decreased by modification of the histidine residues of HRG, whereas modification of 22 of the 33 lysine residues of HRG has little effect.(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
Glicoproteínas/metabolismo , Heparina/metabolismo , Proteínas/metabolismo , Animais , Dietil Pirocarbonato/farmacologia , Cinética , Peso Molecular , Ligação Proteica , Coelhos , Espectrometria de Fluorescência
13.
J Biol Chem ; 271(24): 14323-32, 1996 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-8663084

RESUMO

Upon treatment with denaturing agents, vitronectin has been observed to exhibit conformational alterations which are similar to the structural changes detected when vitronectin binds the thrombin-antithrombin complex or associates with the terminal attack complex of complement. Denaturation and renaturation of vitronectin isolated from human plasma were characterized by changes in intrinsic fluorescence. Unfolding by chemical denaturants was irreversible and accompanied by self-association of the protein to form vitronectin multimers. Self-association was evaluated by equilibrium analytical ultracentrifugation which demonstrated that multimers form only during the refolding process after removal of denaturant, that multimeric vitronectin dissociates to constituent subunits readily upon treatment with chemical denaturant, and that intermolecular disulfide cross-linking occurs primarily at the dimer level among a subset of constituent vitronectin subunits within the multimer. The monomeric form of vitronectin isolated from human plasma partially unfolds at intermediate concentrations of denaturant to an altered conformation with a high propensity to associate into multimers. Folding of vitronectin in vivo appears to be regulated by partitioning of folding intermediates toward either of two conformations, one that exists as a stable monomer and another that associates into a multimeric form.


Assuntos
Conformação Proteica , Dobramento de Proteína , Vitronectina/sangue , Cromatografia Líquida de Alta Pressão , Dicroísmo Circular , Guanidina , Guanidinas/farmacologia , Humanos , Cinética , Substâncias Macromoleculares , Modelos Teóricos , Peso Molecular , Desnaturação Proteica , Espectrometria de Fluorescência , Ultracentrifugação , Ureia/farmacologia , Vitronectina/química , Vitronectina/isolamento & purificação
14.
J Biol Chem ; 261(7): 3214-21, 1986 Mar 05.
Artigo em Inglês | MEDLINE | ID: mdl-3949769

RESUMO

Heparin was fractionated by affinity chromatography on immobilized antithrombin III followed by gel filtration on Sephadex G-100. Eighteen fractions were obtained ranging in molecular weight from 9,700 to 34,300 as determined by sedimentation equilibrium. The binding stoichiometries of antithrombin III and thrombin interactions with the heparin of these fractions were measured, using changes in intrinsic and extrinsic fluorescence. Catalytic activity also was measured for each of the heparin fractions. As the molecular weight of heparin varied from about 10,000 to 30,000, the average number of antithrombin and thrombin sites/heparin molecule varied from 1.0 to 2.1 and 2.4 to 6.8. In addition, the molar specific activity increased 5.7-fold, an increase which correlated directly with the product of the number of antithrombin III and thrombin molecules bound. Thus as the number of bound molecules increased with increased molecular weight, the rate of reaction/bound antithrombin III increased in proportion to the number of bound thrombin molecules and vice versa. This can be explained by assuming that heparin functions as a template for both proteins, that all bound thrombin and antithrombin III molecules are accessible to each other, and that the rate at which a bound molecule reacts is proportional to the number of molecules of its interacting counterpart bound. These observations and conclusions are similar to those of Hoylaerts et al. (Hoylaerts, M., Owen, W. G., and Collen, D. (1984) J. Biol. Chem. 259, 5670-5677), who demonstrated that the rate at which single molecules of antithrombin III, covalently attached to heparin, react increases as the thrombin binding capacity (chain length) of heparin increases.


Assuntos
Antitrombina III/metabolismo , Heparina/isolamento & purificação , Trombina/metabolismo , Animais , Sítios de Ligação , Cromatografia de Afinidade , Cromatografia em Gel , Heparina/análogos & derivados , Heparina/análise , Heparina/metabolismo , Cinética , Peso Molecular , Espectrometria de Fluorescência , Suínos
15.
Biochemistry ; 36(31): 9365-73, 1997 Aug 05.
Artigo em Inglês | MEDLINE | ID: mdl-9235979

RESUMO

Factor Xa and thrombin (factor IIa) activate factor VIII (fVIII) by different proteolytic pathways. Thrombin cleaves fVIII at Arg372 between the A1 and A2 domains, at Arg740 between the A2 and B domains, and at Arg1689 between the B and A3 domains to form an A1/A2/A3-C1-C2 heterotrimer. We now report a stable porcine fVIIIaXa preparation obtained by Mono S HPLC at pH 6. NH2-terminal sequence analysis of purified subunits of fVIIIaXa revealed that factor Xa cleaves fVIII at Arg219 within the A1 domain and at Arg490 within the A2 domain, as well as at Arg372, Arg740, and Arg1689. Analytical ultracentrifugation of the fVIIIaXa preparation yielded results consistent with a single, 148 kDa species, similar to previous results with fVIIIaIIa [Lollar, P., & Parker, C. G. (1989) Biochemistry 28, 666-674]. Thus, the major species in the fVIIIaXa preparation contains five subunits, including fragments of the A1 and A2 domains that remain noncovalently bound. Fluorescence anisotropy measurements indicated there was no difference in the affinity of fVIIIaXa and fVIIIaIIa for a fluorescent dye-labeled, active-site-blocked derivative of porcine factor IXa. Additionally, the fVIIIaXa preparation bound dye-labeled factor IXa with 1:1 stoichiometry, indicating that all fVIIIaXa molecules in the preparation can bind factor IXa. However, fVIIIaXa had 4-fold less procoagulant activity than fVIIIaIIa. Kinetic analysis of fVIIIa cofactor activity using purified factor IXa and factor X suggested this difference is due to greater activity of fVIIIaIIa relative to fVIIIaXa within the intrinsic fXase complex, rather than a difference in their stabilities.


Assuntos
Fator VIII/metabolismo , Fator Xa/metabolismo , Sequência de Aminoácidos , Animais , Catálise , Fator IXa/metabolismo , Fator VIII/química , Humanos , Hidrólise , Cinética , Dados de Sequência Molecular , Ligação Proteica , Homologia de Sequência de Aminoácidos , Relação Estrutura-Atividade , Suínos
16.
J Biol Chem ; 275(33): 25402-10, 2000 Aug 18.
Artigo em Inglês | MEDLINE | ID: mdl-10821827

RESUMO

Plasminogen activator inhibitor-type 1 (PAI-1) is the primary inhibitor of endogenous plasminogen activators that generate plasmin in the vicinity of a thrombus to initiate thrombolysis, or in the pericellular region of cells to facilitate migration and/or tissue remodeling. It has been shown that the physiologically relevant form of PAI-1 is in a complex with the abundant plasma glycoprotein, vitronectin. The interaction between vitronectin and PAI-1 is important for stabilizing the inhibitor in a reactive conformation. Although the complex is clearly significant, information is vague regarding the composition of the complex and consequences of its formation on the distribution and activity of vitronectin in vivo. Most studies have assumed a 1:1 interaction between the two proteins, but this has not been demonstrated experimentally and is a matter of some controversy since more than one PAI-1-binding site has been proposed within the sequence of vitronectin. To address this issue, competition studies using monoclonal antibodies specific for separate epitopes confirmed that the two distinct PAI-1-binding sites present on vitronectin can be occupied simultaneously. Analytical ultracentrifugation was used also for a rigorous analysis of the composition and sizes of complexes formed from purified vitronectin and PAI-1. The predominant associating species observed was high in molecular weight (M(r) approximately 320,000), demonstrating that self-association of vitronectin occurs upon interaction with PAI-1. Moreover, the size of this higher order complex indicates that two molecules of PAI-1 bind per vitronectin molecule. Binding of PAI-1 to vitronectin and association into higher order complexes is proposed to facilitate interaction with macromolecules on surfaces.


Assuntos
Inibidor 1 de Ativador de Plasminogênio/química , Inibidor 1 de Ativador de Plasminogênio/metabolismo , Vitronectina/química , Vitronectina/metabolismo , Anticorpos Monoclonais/química , Anticorpos Monoclonais/metabolismo , Sítios de Ligação , Relação Dose-Resposta Imunológica , Epitopos/química , Escherichia coli/metabolismo , Humanos , Imunoglobulina G/metabolismo , Modelos Químicos , Inibidor 1 de Ativador de Plasminogênio/imunologia , Ligação Proteica , Conformação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Serpinas/química , Ultracentrifugação , Vitronectina/sangue , Vitronectina/imunologia
17.
J Biol Chem ; 259(2): 939-41, 1984 Jan 25.
Artigo em Inglês | MEDLINE | ID: mdl-6693405

RESUMO

Chemical modification of a single tryptophan residue in antithrombin III with dimethyl(2-hydroxy-5-nitrobenzyl)sulfonium bromide blocks heparin binding and the heparin-enhanced inhibition of thrombin without altering the heparin-independent rate of thrombin inhibition (Blackburn, M. N., and Sibley, C. C. (1980) J. Biol. Chem. 255, 824-826). The labeled protein was reduced and carboxymethylated and then cleaved with cyanogen bromide. The peptide containing the hydroxynitrobenzyl-labeled tryptophan was isolated by gel filtration and ion exchange chromatography. Amino acid analysis of the labeled peptide indicates that it corresponds to residues 21 through 89 of human antithrombin III. The site of labeling corresponds to Trp 49, which is located within the disulfide-stabilized loops near the NH2-terminal end of the antithrombin III molecule.


Assuntos
Antitrombina III/metabolismo , Heparina/metabolismo , Triptofano/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Brometo de Cianogênio , Humanos , Conformação Proteica , Compostos de Sulfônio/farmacologia
18.
J Biol Chem ; 262(17): 8061-5, 1987 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-3110143

RESUMO

Identification of lysyl residue(s) in human plasma antithrombin required for binding of heparin was approached using chemical modification with the amino-group reagent pyridoxal 5'-phosphate. Modification of antithrombin with limiting amounts of reagent yields an average incorporation of the phosphopyridoxyl label into 1 lysine/protein molecule (Pecon, J. M., and Blackburn, M. N. (1984) J. Biol. Chem. 259, 935-938). Fractionation of the labeled antithrombin by affinity chromatography on heparin-Sepharose separated a phosphopyridoxylated antithrombin species devoid of heparin binding from modified protein which retained affinity for heparin. To generate peptide maps of the two antithrombin species, the proteins were reductively denatured, S-carboxymethylated, and digested with trypsin. Fractionation of the tryptic digests by reverse-phase high performance liquid chromatography indicated one peak in the chromatogram of the non-heparin-binding species to be clearly different when compared to the chromatogram of the heparin-binding species. The sequence of the unique peptide, determined by automated Edman degradation, was Thr-Ser-Asp-Gln-Ile-His-Phe-Phe-Phe-Ala-Lys-Leu-Asn-Cys-Arg. This peptide corresponds to a tryptic fragment including residues 115-129 in the sequence of antithrombin, with the modified residue identified as Lys-125. Additionally, phosphopyridoxylation of antithrombin in the presence of added heparin indicated that several other lysyl residues were "protected" from modification. Identification of this critical lysine for heparin binding strongly supports previous data which indicate that the heparin-binding domain of antithrombin is located at the NH2 terminus within one of the disulfide cross-linked loops of the protein.


Assuntos
Antitrombinas/metabolismo , Heparina/sangue , Lisina , Fosfato de Piridoxal/farmacologia , Sequência de Aminoácidos , Sítios de Ligação , Humanos , Mapeamento de Peptídeos , Ligação Proteica , Tripsina
19.
Biochemistry ; 38(38): 12296-304, 1999 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-10493797

RESUMO

The crystal structure of the Staphylococcus aureus histidyl-tRNA synthetase apoprotein has been determined at 2.7 A resolution. Several important loops in the active site either become disordered or adopt very different conformations compared to their ligand-bound states. These include the histidine A motif (Arg257-Tyr262) that is essential for substrate recognition, a loop (Gly52-Lys62) that seems to control the communication between the histidine and ATP binding sites, the motif 2 loop (Glu114-Arg120) that binds ATP, and the insertion domain that is likely to bind tRNA. These ligand-induced structural changes are supported by fluorescence experiments, which also suggest highly cooperative dynamics. A dynamic and cooperative active site is most likely necessary for the proper functioning of the histidyl-tRNA synthetase, and suggests a novel mechanism for improving charging fidelity.


Assuntos
Histidina-tRNA Ligase/química , Histidina-tRNA Ligase/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Catálise , Cristalografia por Raios X , Dimerização , Histidina/química , Histidina/metabolismo , Ligantes , Modelos Moleculares , Dados de Sequência Molecular , Conformação Proteica , Espectrometria de Fluorescência , Staphylococcus aureus/enzimologia , Relação Estrutura-Atividade , Termodinâmica , Triptofano/química
20.
Arterioscler Thromb Vasc Biol ; 19(10): 2554-62, 1999 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-10521387

RESUMO

A murine antihuman factor IX monoclonal antibody (BC2) has been generated and evaluated for its capacity to prolong the activated partial thromboplastin time (aPTT) in vitro and ex vivo and to prevent arterial thrombosis in a rat model in vivo. BC2 extended aPTT to a maximum of 60 to 80 seconds at 100 to 1000 nmol/L in vitro (rat and human plasma, respectively) and ex vivo (rat) after dosing of rats up to 6 mg/kg in vivo. BC2, administered as bolus (1 to 6 mg/kg) followed by infusion (0.3 to 2 mg x kg(-1) x h(-1)), dose-dependently prevented thrombosis of an injured rat carotid artery (FeCl(3)-patch model), increased time to artery occlusion, and reduced incidence of vessel occlusion. BC2 efficacy in preventing arterial thrombosis exceeded that of heparin (bolus 15 to 120 U/kg followed by infusion 0.5 to 4.0 U x kg(-1) x min(-1)), whereas the latter rendered the blood incoagulable (aPTT>1000 seconds). BC2 demonstrated complete antithrombotic efficacy also as a single bolus given either as prevessel or postvessel injury as evidenced by reduction of thrombus mass (from 4.18+/-0.49 to 1.80 +/-0.3 mg, P<0.001), increasing vessel patency time (from 14.9+/-0.9 minutes to 58.3+/-1.7 minutes, P<0.001) and decreasing incidence of vessel occlusion from 100% to 0% in vehicle- versus BC2-treated rats, respectively. BC2 (3 mg/kg, IV) administered in a single bolus resulted in 50% reduction in thrombus mass (P<0.01), extended vessel patency time (P<0.001), extended aPTT only 4-fold, and had no effect on blood loss via a tail surgical wound; heparin, at doses that reduced thrombus mass to a similar extent, extended aPTT beyond 1000 seconds (over 500-fold) and increased blood loss from 1.8+/-0.7 to 3.3 +/-0.6 mL (P<0.001). These data suggest that BC2 may provide enhanced therapeutic efficacy in humans at lesser interference with blood hemostasis than heparin.


Assuntos
Anticorpos Monoclonais/farmacologia , Fator IX/imunologia , Trombose/imunologia , Anestesia , Animais , Anticoagulantes/farmacologia , Arteriopatias Oclusivas/induzido quimicamente , Arteriopatias Oclusivas/tratamento farmacológico , Arteriopatias Oclusivas/imunologia , Aspirina/farmacologia , Perda Sanguínea Cirúrgica , Artérias Carótidas , Modelos Animais de Doenças , Relação Dose-Resposta Imunológica , Fator IX/metabolismo , Fibrinolíticos/farmacologia , Heparina/farmacologia , Humanos , Imunoglobulina G/farmacologia , Ferro , Masculino , Microscopia Eletrônica de Varredura , Tempo de Tromboplastina Parcial , Tempo de Protrombina , Ratos , Ratos Sprague-Dawley , Trombose/induzido quimicamente , Trombose/tratamento farmacológico
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