Basal-body-associated macromolecules: a continuing debate.

Controversy over the possibility that centrioles/basal bodies contain nucleic acids has overshadowed results demonstrating other macromolecules in the lumen of these organelles. Glycogen particles, which are known to be present within the lumen of the centriole/basal body of sperm cells, have now been found in basal bodies of protists belonging to three different groups. Here, we extend the debate on a role for RNA in basal body/centriole function and speculate on the origin and the function of centriolar glycogen.

Characterization, cloning and immunolocalization of a coronin homologue in Trichomonas vaginalis.

On adhesion to host cells the flagellate Trichomonas vaginalis switches to an amoeboid form rich in actin microfilaments. We have undertaken the identification of actin-associated proteins that regulate actin dynamics. A monoclonal antibody 4C12 raised against a cytoskeletal fraction of T. vaginalis labeled a protein doublet at circa 50 kDa. These two bands were recognized by the antibody against Dictyostelium discoideum coronin. During cell extraction and actin polymerization, T. vaginalis coronin cosedimented with F-actin. By two-dimensional gel electrophoresis, the protein doublet was separated into two sets of isoforms covering two Ip zones around 6 and 7. By screening a T. vaginalis library with 4C12, two clones Cor 1 and Cor 2 were isolated. This gene duplicity is a particularity among unicellular organisms examined. The complete sequence of the gene Cor 1 encodes a 435-residue protein with a calculated molecular mass of 48 kDa and Ip of 5.58. The incomplete sequence Cor 2 was very similar but with a more basic calculated Ip than Cor 1 on the same region. T. vaginalis coronin had 50% similarity with the coronin family, possessing the five WD-repeats and a leucine zipper in its C-terminal part. Double immunofluorescence labeling showed that coronin mainly colocalized with actin at the periphery of the adherent amoeboid cells. However, coronin labeling displayed patches within a reticular array. Immunogold electron microscopy confirmed the coronin labeling in the actin-rich microfilamentous fringe beneath the plasma membrane, with accumulation in phagocytic zones and pseudopodial extensions. In T. vaginalis, one of the first emerging lineage of eukaryotes, coronin seems to play an important role in actin dynamics and may be a downstream target of a signaling mechanism for the cytoskeleton reorganization.

Evidence for an uncommon alpha-actinin protein in Trichomonas vaginalis.

As part of our ongoing project of identification of actin-binding proteins implicated in the cell transition (flagellate to amoeboid/adherent) of Trichomonas vaginalis, we have characterized an alpha-actinin-related protein in this parasite. The protein (P100) has a molecular mass of 100 kDa and an isoelectric point of 5.5. A monoclonal antibody raised against this protein co-localizes with the actin network. P100 gene transcripts are co-expressed with actin throughout the cell cycle. Analysis of the deduced protein sequence reveals three domains: an N-terminal actin-binding region; a central region rich in alpha-helix; and a C-terminal domain with Ca(2+)-binding capacity. Whereas the N- and C-terminal regions are well-conserved as compared to other alpha-actinins, we observe in the central region an atypical distribution of residues in five repeats. The sequence of the repeats does not show any homology with the rod domain of the other alpha-actinins, except for the first repeat which shows some similarity. The four other repeats of T. vaginalis P100 appear to result from a duplication event which is not detectable in the other sequences.

Molecular cloning of actin genes in Trichomonas vaginalis and phylogeny inferred from actin sequences.

The parasitic protozoan Trichomonas vaginalis is known to contain the ubiquitous and highly conserved protein actin. A genomic library and a cDNA library have been screened to identify and clone the actin gene(s) of T. vaginalis. The nucleotide sequence of one gene and its flanking regions have been determined. The open reading frame encodes a protein of 376 amino acids. The sequence is not interrupted by any introns and the promoter could be represented by a 10 bp motif close to a consensus motif also found upstream of most sequenced T. vaginalis genes. The five different clones isolated from the cDNA library have similar sequences and encode three actin proteins differing only by one or two amino acids. A phylogenetic analysis of 31 actin sequences by distance matrix and parsimony methods, using centractin as outgroup, gives congruent trees with Parabasala branching above Diplomonadida.

Cytoskeleton in trichomonads: I. Immunological and biochemical comparative study of costal proteins in the genus Tritrichomonas.

Proteins of the whole cytoskeleton fraction obtained by Triton X-100 action on several Tritrichomonas species have been analyzed by gel electrophoresis. In addition to tubulins, several major protein components with molecular weights between 100 and 150 kDa were separated and presumably represent costal proteins. The partial purification of the costae from the whole cytoskeleton fraction of Tritrichomonas foetus treated with 0.3 M KI confirmed the presence of costal proteins in the 100-150 kDa zone. Costa fibres could be solubilized in 8 M urea. These characteristics indicate that costal proteins may represent a novel class of striated root proteins. A library of 7 monoclonal antibodies (MAbs) raised in mice immunized with the whole cytoskeleton fraction of Tritrichomonas foetus labelled the costa by immunofluorescence and recognize five polypeptides at 135,127,114, 88 and 47 kDa by immunoblotting. Two of these MAbs cross-react by immunofluorescence and immunoblotting with the three other Tritrichomonas species tested, i.e. T. mobilensis, T. augusta, T. muris. However, these 7 MAbs do not show immunological cross-reactivity with other trichomonad genera indicating that the costae are not identical in their biochemical composition; this corresponds to the differences observed in their respective fine structure. Nonetheless, a polyclonal antibody produced against the 118 kDa protein of the costa of Trichomonas vaginalis also labels a 118 kDa protein and the costa by IF in Tritrichomonas species indicating common epitopes.

Cytoskeleton in trichomonads: II. Immunological and biochemical characterization of the preaxostylar fibres and undulating membrane in the genus Tritrichomonas.

The production of 3 monoclonal antibodies (MAbs) and the use of immunocytochemical techniques such as immunofluorescence (IF), immunoblotting (IB) and immunogold staining (IGS) reveal that the preaxostylar fibres of Tritrichomonas foetus are composed of at least 3 polypeptides of 55, 53 and 46 kDa. Two of these MAbs cross-react with Tritrichomonas mobilensis and one with Tritrichomonas augusta and Tritrichomonas muris on polypeptides with very similar molecular weights (M.W.) However, no cross-reactivity is seen with the preaxostylar fibres of other trichomonad species tested. These cross-reactivities restricted to the Tritrichomonas genus are similar to those observed with the costa and several explanations are proposed. Similarly, 5 MAbs obtained against Tritrichomonas foetus cytoskeleton label the undulating membrane (UM) by IF and IGS. IB identifies 5 polypeptides of very different M.W. (148, 72, 39, 33 and 23 kDa) in Tritrichomonas foetus. Among them, 2 cross-react by IF and IB in Tritrichomonas mobilensis, one in Tritrichomonas augusta and none in Tritrichomonas muris. These results are in agreement with the electron microscopy studies which have shown that the UM ultrastructure of Tritrichomonas foetus, Tritrichomonas mobilensis and Tritrichomonas augusta are very similar and different from that of Tritrichomonas muris. The lack of cross-reactivity with the lamellar type UM of the Trichomonadinae genera which is very different from the Tritrichomonadinae UM is also demonstrated.

The ultrastructural identity of Stephanopogon apogon and the relatedness of the genus to other kinds of protists.

The ultrastructural organization of the marine benthic protist Stephanopogon apogon is presented. Emphasis is placed on the structure of the mouth, the cortex, and the locomotor flagella. Viewed with a light-microscope, individuals of this species closely resemble members of the phylum Ciliophora (in terms of ciliation, body form, and presence of a discrete mouth), but Stephanopogon cells are ultrastructurally unlike all ciliophora in respect of the oral apparatus, cortical organization, and locomotor systems. The proposition that Stephanopogon is related to Euglenozoa is discussed, and is found to be supported by a single character, the form of the mitochondrial cristae. Placement of Stephanopogon in the Euglenozoa is therefore deemed to be premature.

A cytological study of Aulacomonas submarina Skuja 1939, a heterotrophic flagellate with a novel ultrastructural identity.

Aulacomonas submarina is a free-living freshwater heterotrophic flagellate, the ultrastructure of which is described here. It has two long, nearly equal flagella that insert apically and beat asynchronously. It engulfs prey as large as itself via a ventral groove. The nucleus is anterior and surrounded by several dictyosomes. The two flagella are similar in structure. The most external part of the transition zone is marked by a constriction of the membrane, and distal to this the periaxonemal space expands for a short distance. The two basal bodies are inclined to each other and connected by roots, in a style reminiscent of some heterokont organisms. The basal body of the dorsal flagellum (Fl) is connected to a dorsal cytoskeletal root that is comprised of 5 superimposed microtubules and which sweeps from right to left in an incomplete loop near the cell apex. This loop is reinforced near its origin by an electron-dense rootlet. Material associated with the dorsal root gives rise to cortical microtubules which form a cape covering the apical region of the cell. The ventral basal body (of flagellum F2) is connected to two microtubular and microfibrillar fibres which support the lips of the ventral groove. More distally the lips of the groove are bordered only by a ridge supported by microfibrillar material. Mitochondria have bleb-shaped tubular cristae similar to those of actinophryid heliozoa. There is no cyst. The shape of the mitochondrial cristae, and the arrangement of basal bodies suggest that this genus is distantly related to the heterokont flagellates. However, most aspects of the ultrastructure are unlike those of other flagellates, such that Aulacomonas cannot be assigned to any familiar subgroup of heterokont organisms or other group of flagellates.

Evidence for common epitopes among proteins of the membrane skeleton of a ciliate, an euglenoid and a dinoflagellate.

The cytoskeleton of many protists comprises an extensive submembranous epiplasm which contributes to cell shape and integration of cell membranes with underlying structures according to the species-specific cortical architecture. Using various extraction procedures, epiplasm-enriched fractions have been isolated from the ciliate Pseudomicrothorax dubius, the euglenoid Euglena acus and the dinoflagellate Noctiluca scintillans. Comparative gel electrophoretic analysis of such preparations reveals heterogeneity of protein composition, the major polypeptides differing in size. Antibodies raised against epiplasmic proteins from these three organisms have permitted the confirmation of submembranous localization of the antigens by immunoelectron microscopy. Heterologous reactions performed by means of combined immunocytochemical and immunoblotting procedures indicate the existence of common epitopes among major proteins making up the bulk of the epiplasm of the three species examined. These findings suggest that proteins of the epiplasm have significantly diverged during evolution while conserving structural domains essential for their cytoskeletal function. It is postulated that these common domains may underly the ability of epiplasmic proteins to assemble into an ordered spatial organization, typical of the highly differentiated cortex of unicellular micro-organisms.

Psalteriomonas lanterna gen. nov., sp. nov., a free-living amoeboflagellate isolated from freshwater anaerobic sediments.

A novel amoeboflagellate, isolated from anoxic sediment samples, is described and named Psalteriomonas lanterna gen. nov., sp. nov. The cells of the flagellate stage show a fourfold rotational symmetry with four nuclei, four ventral grooves and four mastigont systems. Each mastigont has four flagella of equal length. Microtubular roots, striated roots or rhizoplasts and electron-dense structures are associated with their basal bodies. A Golgi apparatus is absent. Organelles surrounded by rough endoplasmic reticulum (RER) are presumably modified mitochondria. Methanogenic endosymbiotic bacteria are closely associated with microbodies and form a central body. Nuclear division shows the characteristics of a closed mitosis. Cells of the amoeboid stage are mononucleated and lack the methanogenic endosymbionts. Reproduction occurs in both stages of the life cycle.

Isolation and ultrastructural features of a new strain of Dimastigella trypaniformis Sandon 1928 (Bodonina, Kinetoplastida) and comparison with a previously isolated strain.

A strain of the free-living flagellate Dimastigella trypaniformis Sandon was isolated from the gut contents of the Australian termite Mastotermes darwiniensis Froggatt. The fine structure of the isolate (Ulm strain) was compared with a strain isolated from soil in Scotland (Glasgow strain). The biflagellated trophozoites possess great morphological similarities with the bodonids and cryptobiids such as a polykinetoplastic mitochondrial complex, a flagellar paraxial rod, and a cytopharyngeal complex. However, characteristic features are also found such as the two opposed basal bodies and the two flagella, one anteriorly and the other recurrently directed, the latter adhering to a ventral furrow, a rostrum as well as a cytostome and a cytopharynx with rostral structures. These organisms have a typical motion with a highly flexible cell body. They are able to form resistant cysts in the culture. The two strains are distinguishable by small differences in their growth characteristics in different media and qualitative ultrastructural features.

Symbiotic association of Psalteriomonas vulgaris n. spec. with Methanobacterium formicicum.

The free-living anaerobic flagellate Psalteriomonas vulgaris n. spec. is described. The organism has four flagella of equal length which arise immediately subapically to the anterior part of the cell, within the apex of the ventral groove. The ultrastructural organization of the mastigont system and the ventral groove show the characteristics of the genus Psalteriomonas. The cells harboured methanogenic endosymbionts which were associated with hydrogenosome-like organelles in which hydrogenase could be localized. The methanogenic bacteria were isolated and identified as Methanobacterium formicicum. After addition of 5% O(2) to the cultures, the cells lost the methanogenic endosymbionts. P. vulgaris lacked cytochrome oxidase and catalase but contained superoxide dismutase.

Flagellar apparatus duplication and partition, flagellar transformation during division in Entosiphon sulcatum.

Electron microscopic examination of serial sections of developmental stages of the flagellar apparatus during the cell cycle indicates that the basal bodies replicate in a semi-conservative manner and that there is a flagellar transformation over two cell cycles in euglenoids as in other algal flagellate groups. Two new pairs of basal bodies are formed, each pair comprising one parental and one newly developed basal body. There is a transformation of the parental dorsal flagellum containing a thin paraxonemal rod into a ventral flagellum bearing a large paraxonemal rod. Observation of the roots associated with the basal bodies shows that the dorsal root transforms into an intermediate root over two cell cycles following the transformation of the dorsal basal body/flagellum to a ventral one. Also the two ventral roots are newly formed in relation to the formation of two new phagotrophic apparatuses during the division. After the breakage of the connection between the parental basal bodies the two new pairs move apart and are guided/drawn by transverse microfibrillar bundles which connect them to opposite sides of the pellicle. The axis of the separation/migration of the pairs of basal bodies is parallel to the axis of elongation of the dividing nucleus.

Probing protistan phylogenies with an anti-tubulin antibody.

Representatives from most of the protist phyla were probed by immunofluorescence or by immunoblotting with an anti-tubulin antibody of sharp specificity previously raised against Paramecium axonemal tubulin. Excellent intra-phylum homogeneity of results was recorded except for chlorophytes. All ciliates, dinoflagellates and cryptomonads tested were strongly positive while actinopods, Euglenozoa and parabasalids were negative. All representatives of the broad chromophyte assemblage were positive while all rhizopods were negative. This simple binary immunological character was superimposed on a number of published protist phylogenies and seen to fit very well with some of them. Other immunological approaches to protist taxonomy and evolution are briefly reviewed.

Molecular evolution of the 5'-terminal domain of large-subunit rRNA from lower eukaryotes. A broad phylogeny covering photosynthetic and non-photosynthetic protists.

This paper summarizes the present status of an analysis of protist phylogeny using rapid partial sequencing of 28S rRNA. Data from 12 protistan phyla are now available and have been used to construct a tentative dendrogram based on a distance matrix method. The tree is robust and has considerable internal consistency. The following salient points are observed: a number of flagellate groups (particularly Euglenozoa) emerge very early among eukaryotes, whereas ciliates and dinoflagellates emerge late, suggesting that some characteristics that had been considered as primitive may in fact be derived. Both chlorophytic and chromophytic photosynthetic protists emerge very late in the tree, close to the Metazoa-Metaphyta-Fungi radiation, suggesting relatively late occurrence of the photosynthetic symbiosis. Taxonomic and phylogenetic information is also obtained within a phylum where rRNA of enough species are sequenced. A deep trichotomy is thus observed within the ciliates. The data are discussed with respect to classical protist phylogenies.

[Cytoskeletal actin and its associated proteins. Some examples in Protista]. / L'actine cytosquelettique et ses protéines associées. Quelques exemples chez les protistes.

Many processes, cell motility being an example, require cells to remodel the actin cytoskeleton in response to both intracellular and extracellular signals. Reorganization of the actin cytoskeleton involves the rapid disassembly and reassembly of actin filaments, a phenomenon regulated by the action of particular actin-binding proteins. In recent years, an interest in studying actin regulation in unicellular organisms has arisen. Parasitic protozoan are among these organisms and studies of the cytoskeleton functions of these protozoan are relevant related to either cell biology or pathogenicity. To discuss recent data in this field, a symposium concerning "Actin and actin-binding proteins in protists" was held on May 8-11 in Paris, France, during the XXXV meeting of the French Society of Protistology. As a brief summary of the symposium we report here findings concerning the in vitro actin dynamic assembly, as well as the characterization of several actin-binding proteins from the parasitic protozoan Entamoeba histolytica, Trichomonas vaginalis and Plasmodium knowlesi. In addition, localization of actin in non-pathogen protists such as Prorocentrum micans and Crypthecodinium cohnii is also presented. The data show that some actin-binding proteins facilitate organization of filaments into higher order structures as pseudopods, while others have regulatory functions, indicating very particular roles for actin-binding proteins. One of the proteins discussed during the symposium, the actin depolymerizing factor ADF, was shown to enhance the treadmilling rate of actin filaments. In vitro, ADF binds to the ADP-bound forms of G-actin and F-actin, thereby participating in and changing the rate of actin assembly. Biochemical approaches allowed the identification of a protein complex formed by HSP/C70-cap32-34 which might also be involved in depolymerization of F-actin in P. knowlesi. Molecular and cellular approaches were used to identify proteins such as ABP-120 and myosin IB at the leading edge of E. histolytica. ABP-120 organizes F-actin in a network and myosin IB participates in the pseudopod formation. Similar approaches using T. vaginalis resulted in the discovery of an actin-binding protein that participate in the F-actin reorganization during adhesion of parasites to target cells. This protein is homologous to alpha-actinin from other eukaryotic cells. Finally, by using cell biology approaches, F-actin was observed in the cytoplasm as well as in the nucleus of Dinoflagellates. The recent developments in the molecular genetics of protozoa will provide new insights to understand the roles of actin-binding proteins during cytoskeleton activities.

Devescovinid features, a remarkable surface cytoskeleton, and epibiotic bacteria revisited in Mixotricha paradoxa, a parabasalid flagellate.

This work reports on the flagellate systematics and phylogeny, cytoskeleton, prokaryote-eukaryote cell junction organisation, and epibiotic bacteria identification. It confirms the pioneer 1964 study on Mixotricha paradoxa and supplies new information. Mixotricha paradoxa has a cresta structure specific to devescovinid parabasalid flagellates, a slightly modified recurrent flagellum, and an axostylar tube containing two lamina-shaped parabasal fibres. However, many parabasal profiles are distributed throughout the cell body. There is a conspicuous cortical microfibrillar network whose strands are related to cell junction structures subjacent to epibiotic bacteria. The supposed actin composition of this network could not be demonstrated with anti-actin antibodies or phalloidin labelling. Four types of epibiotic bacteria were described. Bacillus-shaped bacteria with a Gram-negative organisation are nested in alternate rows on most of the surface of the protozoon. They induce a striated calyxlike junction structure beneath the adhesion zone linked to the cortical microfibrillar network. Slender spirochetes are attached by one differentiated end to the plasma membrane of the protozoon, forming knobs on the cell surface. Two very similar long rod-shaped bacteria are also attached on the knobs of the plasma membrane. A large spirochete attributed to the genus Canaleparolina is also attached to the protozoon. Observations on epibiotic bacteria and of their attachments are compared with several described epibiotic bacteria of symbiotic protozoa and with the results of the molecular identification of the epibiotic bacteria of M. paradoxa.

[Ultrastructure of the genus Enteromonas da Fonseca (Zoomastigophorea) and revision of the order of Diplomonadida Wenyon]. / Etude Ultrastructurale du Genre Enteromonas da Fonseca (Zoomastigophorea) et Révision de l'Ordre des Diplomonadida Wenyon

Fine structure of 2 species of Enteromonas, one from the intestine of the salamander, Triturus vulgairs, and another from the feces of domestic rabbit, Oryctolagus cuniculi, is described. The pyriform cell has an anteriorly located nucleus. The 4 flagella originate from an area near the anterior end of the nucleus. The recurrent flagellum (R) is lodged in a ventral depression or cytostome. The kinetosomes, arranged into 2 pairs, anterior (no. 1, no. 2) and posterior ("3, R), are interconnected by microfibrils. One microtubular fiber, connected to kinetosome "1, is situated near the anterior surface of the nucleus. Another, subnuclear, microtubular fiber is homologous to the "crossed" fiber found in Diplozoa. The cytostome is bordered by 2 lips: the preeminent left lip is equipped with several rows of microtubules, while the right lip contains only a thin microtubular fiber associated with microfibrils. The cytostome occupies 2/3 of the ventral surface. The recurrent flagellum passos over the anterior surface of the cell and then comes to lie in the cytostome. The bacteria are phagocytosed in the bottom part of the cytostome between the 2 distended lips. They are digested in numerous vacuoles. The undigested residual bodies are evacuated by a rupture of the cell membrane. The ergastoplasm is concentrated near the cell periphery. Mitochondria and the Golgi apparatus are absent. In the cyst stage, the multinucleate cell is enclosed in a microfibrillar membrane; the axonemes lie free in the cytoplasm. Diplomonad forms of Enteromonas resembling Hexamita are numerous, except that the cytostome is different in these 2 genera. In such forms, the arrangement of the 2 individuals often has binary axial symmetry, but on occasion they are associated in a more anarchic fashion. The mastigont of Enteromonas is organized like that of a single zooid of a diplozoon. It is possible that the genus Enteromonas is ancestral to Diplomonadida and that the diplomonad state, transitory in Enteromonas, became permanently established in Diplomonadida. Enteromonas appears to be more primitive than the other genera of Diplomonadida. Thus we propose 2 suborders: Enteromonadina, subord. nov. with the genus Enteromonas, and Diplomonadina Wenyon, emend., with the genera Trepomonas, Trigonomonas, Hexamita, Spironucleus, Octomitus, Giardia. The arrangement of the kinetosomes and the existence of a cytostome are the principal characters common to Enteromonas and Retortamonadida, while their "accessory" fibers are not homologous. A more complete study of division of the 2 zooflagellate orders is necessary for the presentation of a more detailed evolutionary scheme of these groups.

Striated fibers in trichomonads: costa proteins represent a new class of proteins forming striated roots.

The production of monoclonal antibodies and the use of biochemical techniques revealed that B-type costa proteins in trichomonads are composed of several major polypeptides with molecular weight detected between 100 and 135 kDa similar to those found in the A-type costae. Although differences were observed between the two types in their fine structure, we tested whether proteins composing the two costa types belong to the same protein family. A polyclonal antibody produced against the 118 kDa costa protein of Trichomonas vaginalis also recognized a 118 kDa costa protein in all other trichomonad genera studied so far whether they have A- or B-type costae. Moreover biochemical characteristics of costa proteins indicated that these proteins might represent a novel class of striated root-forming proteins in addition to centrin, giardin, and assemblin.

Actin cytoskeleton demonstration in Trichomonas vaginalis and in other trichomonads.

The flagellate form of Trichomonas vaginalis (T v) transforms to amoeboid cells upon adherence to converslips. They grow and their nuclei divide without undergoing cytokinesis, yielding giant cells and a monolayer of T v F-actin was demonstrated in Trichomonas vaginalis by fluorescence microscopy using phalloidin and an anti-actin mAb which labelled the cytoplasm of both the flagellate and amoeboid forms. Comparative electrophoresis and immunoblotting established that the actin band has the same 42 kDa as muscle actin, but 2-D electrophoresis resolved the actin band into four spots; the two major spots observed were superimposable with major muscle actin isoforms. Electron microscopy demonstrated an ectoplasmic microfibrillar layer along the adhesion zone of amoeboid T v adhering to coverslips. Immunogold staining, using anti-actin monoclonal antibodies demonstrated that this layer was mainly composed of actin microfilaments. A comparative immunoblotting study comprising seven trichomonad species showed that all trichomonads studied expressed actin. The mAb Sigma A-4700 specific for an epitope on the actin C-terminal sequence labelled only actin of Trichomonas vaginalis, Tetratrichomonas gallinarum. Trichomitus batrachorum and Hypotrichomonas acosta, but not the actin of Tritrichomonas foetus, Tritrichomonas augusta and Monocercomonas sp. This discrimination between a 'trichomonas branch' and a 'tritrichomonas branch' is congruent with inferred sequence phylogeny from SSu rRNA and with classical phylogeny of trichomonads.