Microbial Response to Coastal-Offshore Gradients in Taiwan Straits: Community Metabolism and Total Prokaryotic Abundance as Potential Proxies.

Located between the South and the East China Sea, the Taiwan Straits (TWS) are a marine shelf-channel area, with unique hydrological and geomorphological features affected by rivers inflow and with recent algal blooms with red tide events. This study aimed at assessing microbial distribution and function and their modulation in response to environmental gradients. Surface (0.5 m) water samples from 16 stations along five north to south transects were collected; total prokaryotic abundance by epifluorescence microscope and carbon substrate utilization patterns by Biolog Ecoplates were estimated. Spatially, a patchy microbial distribution was found, with the highest microbial metabolic levels and prokaryotic abundance in the TWS area between Minjiang River estuary and Pingtan Island, and progressive decreases towards offshore stations. Complex carbon sources and carbohydrates were preferentially metabolized. This study provides a snapshot of the microbial abundance and activity in TWS as a model site of aquatic ecosystems impacted from land inputs; obtained data highlights that microbial metabolism is more sensitive than abundance to environmental changes.

Regulation of the Nutrient Cycle Pathway and the Microbial Loop Structure by Different Types of Dissolved Organic Matter Decomposition in Lakes.

To explore the effect of different types of dissolved organic matter (DOM) decomposition on nutrient cycling pathways and the microbial loop, four lakes with different DOM sources were investigated monthly. In Lake Tangxun, Dolichospermum decay released highly labile dissolved organic nitrogen into the water column. This induced bacterial organic nitrogen decomposition, as indicated by the increased abundance of gltB, gltD, gdh, and glnA as well as aminopeptidase activity. Genes associated with dissimilatory nitrate reduction to ammonium further fueled ammonium accumulation, driving Microcystis blooms in the summer. In Lake Zhiyin, fish bait deposits (high nitrogen, similar to Dolichospermum detritus) also caused Microcystis blooms. Detritus from Microcystis decomposition then produced high levels of labile dissolved organic phosphorus, inducing phosphatase activity and increasing soluble reactive phosphorus concentrations from September to April in Lakes Tangxun and Zhiyin. The high refractory DOM from macrophytes in Lake Houguan led to insufficient nutrient availability, leading to nutrient mutualism between algae and bacteria. The high levels of labile dissolved organic carbon from terrestrial detritus in Lake Yandong increased bacterial biomass and production, resulting in low chlorophyll content due to the competitive relationship between algal and bacterial nutrient requirements. Therefore, different DOM compositions induce unique connections among available nutrients, algae, and bacteria in the microbial loop.

Interactions between Phosphorus Enrichment and Nitrification Accelerate Relative Nitrogen Deficiency during Cyanobacterial Blooms in a Large Shallow Eutrophic Lake.

Regime shifts between nitrogen (N) and phosphorus (P) limitation, which trigger cyanobacterial succession, occur in shallow eutrophic lakes seasonally. However, the underlying mechanism is not yet fully illustrated. We provide a novel insight to address this from interactions between sediment P and nitrification through monthly field investigations including 204 samples and microcosm experiments in Lake Chaohu. Total N to P mass ratios (TN/TP) varied significantly across seasons especially during algal bloom in summer, with the average value being 26.1 in June and descending to 7.8 in September gradually, triggering dominant cyanobacterial succession from Microcystis to Dolichospermum. The regulation effect of sediment N/P on water column TN/TP was stronger in summer than in other seasons. Iron-bound P and alkaline phosphatase activity in sediment, rather than ammonium, contributed to the higher part of nitrification. Furthermore, our microcosm experiments confirmed that soluble active P and enzymatic hydrolysis of organic P, accumulating during algal bloom, fueled nitrifiers and nitrification in sediments. These processes promoted lake N removal and led to relative N deficiency in turn. Our results highlight that N and P cycles do not exist independently but rather interact with each other during lake eutrophication, supporting the dual N and P reduction program to mitigate eutrophication in shallow eutrophic lakes.

Metagenomic insights into feasibility of agricultural wastes on optimizing water quality and natural bait by regulating microbial loop.

Effective screening feed substitutes for improving water quality in aquaculture systems has become a trending research topic now. In this study, three typical organic agricultural wastes, including sugar cane bagasse (SC), coconut shell powder (CS), and corn cob powder (CC), were selected to evaluate their potential roles on the optimization of water quality and natural bait compared to aquafeeds. Fish feed resulted in the highest growth rate of fish but the worst water quality. Organic detritus addition markedly improved the water quality, especially soluble reactive phosphorus (SRP, decrease of 56-61%) and ammonium (decrease of 16% in SC, 47% in CC). Specially, SC induced core microbes to mediate nutrients transformation and recycling (N2-fixation, ammonification, nitrification, dissimilatory nitrate reduction to ammonia and organic nutrients decomposition), which facilitated the primary productivity based on their positive relationships. This further reduced the available nutrients (especially SRP) in the water and built a mutually beneficial microbial loop. In addition, SC addition increased the abundance of genes involved in amino acids biosynthesis pathways, photosynthesis, and carbon fixation. These results led to energy transfer to higher trophic levels. The addition of CC had a better effect than SC in terms of lower nitrogen levels and a higher fish growth rate (19% in CC, 5% in SC). However, low temperatures and carbon accumulation jointly drive the anaerobic decomposition, resulting in unhealthy microbial loops and low fish growth rates. In contrast to the direct consumption of fish feed, organic detritus can induce more natural bait to provide food for fish by regulating the microbial loop, as showed by the microbial community composition in the water and fish gut. To comprehensively assess water quality, natural bait, and fish growth and quality, certain organic detritus should be considered as an auxiliary material to partially replace feed for healthy and sustainable aquaculture systems.

Antibiotic resistance genes and their links with bacteria and environmental factors in three predominant freshwater aquaculture modes.

Rapid development of aquaculture industry and increasing demand of various inputs (especially antibiotics), are suspected to promote the occurrence and spread of ARGs in aquaculture related environments. However, the occurrences of ARGs under different freshwater aquaculture practices are rarely known. Here, we investigated the seasonal profiles of the main ARGs, intI1 and bacteria in waters from three kinds of predominant freshwater aquaculture practices around the Honghu Lake (China), as well as their co-occurrences and interrelationships with antibiotics, heavy metals and general water quality. The results indicate that quinolone resistance genes (qnrB), tetracycline resistance genes (tetB and tetX) and sulfonamide resistance genes (sul1 and sul2) were the top five predominant ARGs with seasonal variations of abundance. Fish ponds were of the highest absolute abundances of tested ARGs than the other two modes. Crayfish ponds and their adjacent ditches shared similar ARGs profile. Different subtypes of ARGs belonging to the same class of resistance were varied in abundances. Some bacteria were predicted to carry different ARGs, which indicating multi-antibiotic resistances. Moreover, the combined environmental factors (antibiotics, heavy metals and water quality) partially shaped the profiles of ARGs and bacteria composition. Overall, this study provides new comprehensive understanding on the characterization of ARGs contamination in different freshwater aquaculture practices from the perspectives of environmental chemistry, microbiology and ecology. The results would benefit the optimization of aquaculture practices toward environmental integrity and sustainability.

Mechanisms and risks of joint control of nitrogen and phosphorus through sediment capping technology in a pilot-scale study.

Purpose: Nitrogen (N) and phosphorus (P) are the key elements leading to eutrophication, and it is important to jointly control N and P release from sediments into the water column. Methods: Different mixed materials including P sorbent, natural organic carbon (C), and an oxidizing agent were applied in a 1-year pilot-scale experiment. Results: The addition of iron-rich (IR) clay and Phoslock agent promoted the formation of iron bound P (Fe(OOH)~P) and calcium bound P (CaCO3~P) in sediments, respectively. IR clay offered more advantages in immobilization of phosphorus as refractory P, and the Phoslock agent more effectively reduced the risk of P release into water, which was expressed as a low equilibrium P concentration (EPC0). Mixtures of sugarcane (SU) detritus and IR clay exhibited high carbohydrate (CHO) contents, which further fuelled both denitrification and dissimilatory nitrate reduction to ammonium (DNRA). This indicated that the SU dosage should be controlled to avoid DNRA over denitrification. Attention should be given to the fact that SU introduction significantly promoted the generation of an anaerobic state, leading to the desorption and release of Fe(OOH)~P, which could be alleviated by using Oxone. Multienzyme activity analysis showed that P and N transformation shifted from P desorption to organic P hydrolysis and from ammonification to denitrification and DNRA, respectively. Conclusion: We recommend the use of P sorbent and organic C combined with oxidizing agents as effective mixed materials for sediment remediation, which could enhance P adsorption and provide electron donors for denitrification, while also avoiding the generation of anoxia.

Nutrients regeneration pathway, release potential, transformation pattern and algal utilization strategies jointly drove cyanobacterial growth and their succession.

In order to better understand the contribution of nutrients regeneration pathway, release potential and transformation pattern to cyanobacterial growth and succession, 7 sampling sites in Lake Chaohu with different bloom degree were studied every two months from February to November 2018. The carbon, nitrogen (N) and phosphorus (P) forms or fractions in surface, interstitial water and sediments as well as extracellular enzymatic activities, P sorption, specific microbial abundance and community composition in sediments were analyzed. P regeneration pathway was dominated by iron-bound P desorption and phosphorus-solubilizing bacteria solubilization in severe-bloom and slight-bloom area respectively, which both resulted in high soluble reactive phosphorus (SRP) accumulation in interstitial water. However, in severe-bloom area, higher P release potential caused the strong P release and algal growth, compared to slight-bloom area. In spring, P limitation and N selective assimilation of Dolichospermum facilitated nitrate accumulation in surface water, which provided enough N source for the initiation of Microcystis bloom. In summer, the accumulated organic N in Dolichospermum cells during its bloom was re-mineralized as ammonium to replenish N source for the sustainable development of Microcystis bloom. Furthermore, SRP continuous release led to the replacement of Dolichospermum by Microcystis with the advantage of P quick utilization, transport and storage. Taken together, the succession from Dolichospermum to Microcystis was due to both the different forms of N and P in water column mediated by different regeneration and transformation pathways as well as release potential, and algal N and P utilization strategies.

The Impact of Anthropogenic Disturbance on Bacterioplankton Communities During the Construction of Donghu Tunnel (Wuhan, China).

Bacterioplankton are both primary producers and primary consumers in aquatic ecosystems, which were commonly investigated to reflect environmental changes, evaluate primary productivity, and assess biogeochemical cycles. However, there is relatively less understanding of their responses to anthropogenic disturbances such as constructions of dams/tunnels/roads that may significantly affect the aquatic ecosystem. To fill such gap, this study focused on the bacterioplankton communities' diversity and turnover during a tunnel construction across an urban lake (Lake Donghu, Wuhan, China), and five batches of samples were collected within 2 months according to the tunnel construction progress. Results indicated that both resources and predator factors contributed significant to the variations of bacterioplankton communities, but the closed area and open areas showed different diversity patterns due to the impacts of tunnel construction. Briefly, the phytoplankton, TN, and TP in water were still significantly correlated with the bacterioplankton composition and diversity like that in normal conditions. Additionally, the organic matter, TN, and NH4-N in sediments also showed clear effects on the bacterioplankton. However, the predator effects on the bacterioplankton in the closed-off construction area mainly derived from large zooplankton (i.e., cladocerans), while small zooplankton such as protozoa and rotifers are only responsible for weak predator effects on the bacterioplankton in the open areas. Further analysis about the ecological driving forces indicated that the bacterioplankton communities' turnover during the tunnel construction was mainly governed by the homogeneous selection due to similar environments within the closed area or the open areas at two different stages. This finding suggests that bacterioplankton communities can quickly adapt to the environmental modifications resulting from tunnel construction activities. This study can also give references to enhance our understanding on bacterioplankton communities' response to ecological and environmental changes due to intensification of construction and urbanization in and around lake ecosystems.

Mutual Dependence of Nitrogen and Phosphorus as Key Nutrient Elements: One Facilitates Dolichospermum flos-aquae to Overcome the Limitations of the Other.

Dolichospermum flos-aquae (formerly Anabaena flos-aquae) is a diazotrophic cyanobacterium causing harmful blooms worldwide, which is partly attributed to its capacity to compete for nitrogen (N) and phosphorus (P). Preventing the blooms by reducing P alone or both N and P has caused debate. To test the effects alone and together on the growth of cyanobacteria, we performed culture experiments in different eutrophication scenarios. N2 fixation in terms of heterocyst density, nitrogenase activity and nifH expression increased significantly in P-replete cultures, suggesting that P enrichment facilitates N2 fixation. Correspondingly, the expression of genes involved in P uptake, e.g., those involved in P-transport ( pstS) and the hydrolysis of phosphomonoesters ( phoD), was upregulated in P-deficient cultures. Interestingly, N addition enhanced not only the expression of these genes but also polyphosphate formation and alkaline phosphatase activity in P-deficient cultures relative to the P-replete cultures, as evidenced by qualitative (enzyme-labeled fluorescence) and quantitative (fluorogenic spectrophotometry) measurements. Furthermore, after N addition, cell activity and growth increased in the P-deficient cultures, underscoring the risk of N enrichment in P-limited systems. The eco-physiological responses shown here help further our understanding of the mechanism of N and P colimitation and underscore the importance of dual N and P reduction in controlling cyanobacterial blooms.

Photo-induced phosphate released from organic phosphorus degradation in deionized and natural water.

The photodegradation of organic phosphorus is one of the most important processes of the phosphorus cycle by which phosphate is regenerated in the water environment. In this study, the influence of direct photolysis or indirect photolysis of organic phosphorus using natural photosensitizers on the released phosphate was examined in deionized and natural water under ultraviolet (UV) irradiation using diazinon as the organic phosphorus model. Phosphate was released when diazinon was exposed to UV light, and the solution pH also exhibited distinct influences on the phosphate that was released from diazinon photodegradation. When the natural photosensitizers were added, the amount of phosphate released increased significantly because of the diazinon indirect photodegradation by reactive species, such as the hydroxyl radical generated by NO3- and Fe3+. However, humic acid and HCO3- inhibited the phosphate released by a radical scavenging effect. When natural water was spiked with diazinon, the phosphate that was released in natural water was higher than that of the control or deionized water, and the phosphate that was released was inhibited when isopropanol was added to the reaction. In addition, the formation of hydroxyl radicals (˙OH) in the natural water systems was identified from the photoluminescence spectra using coumarin as the trapping molecule, and the steady-state concentration of ˙OH in natural water was 3.07 ± 0.57 × 10-16 M under UV irradiation. All of these results indicated that direct and indirect photolysis degradation of organic phosphorus significantly impacts the release of phosphate in surface waters.

Relationship between eutrophication and greenhouse gases emission in shallow freshwater lakes.

In shallow lakes, there are complex relationships between lake eutrophication and greenhouse gas emissions that deserve to be studied, which are important for solving lake eutrophication, slowing down climate warming, and reducing carbon emissions. In order to explore the relationship and mechanism between eutrophication and greenhouse gases (GHGs), the net GHGs emission flux and transformation of carbon, and nitrogen in 45 shallow freshwater lakes were investigated from May to September 2022. Eutrophication facilitated potential denitrification rate (Dt) without increasing nitrous oxide (N2O) production based on the significantly positive relationship between eutrophication and Dt. This should be attributed to the shift from incomplete (N2O producing process) to complete denitrification (N2 producing process). Compared to NarG mediating nitrate (NO3-) to nitrite (NO2-), fewer eutrophication indicators showed a positive relationship with NosZ mediating N2O to N2, suggesting that more stringent conditions are required for complete denitrification, which was achieved in the lakes we investigated. Optimal reduction in net carbon dioxide (CO2) emissions occurs at high levels of primary productivity, as indicated by the V-shaped relationship between chlorophyll a (Chl a) and CO2 emissions. However, in hyper-eutrophic lakes, there is an upward trend in CO2 production. The possible explanations should include CO2 production and fixation as well as methane (CH4) oxidation. The bell-shaped relationship between the net flux of CH4 emission and Chl a could be explained that CH4 was heavily oxidized due to sufficient oxygen caused by algal bloom. This fact gave evidence for the increase of the net flux of CO2 emission in high primary productivity lakes. Therefore, the relationship and mechanism between net GHGs emission flux and eutrophication remained complex and various.

Hydrological regimes and water quality variations in the Yangtze River basin from 1998 to 2018.

Understanding the long-term variations in basins that undergo large-scale hydroelectric projects is crucial for effective dam operation and watershed management. In this study, comprehensive analyses were conducted on a dataset spanning over 20 years (1998-2018) of hydrological regime and physicochemical parameters from the Yangtze River basin to evaluate the potential impacts of the Three Gorges Dam. Water level significantly increased from 128.75±58.18 m in 2002 to 136.78±55.05 m in 2005, and the mean flow velocity significantly decreased from 2004 to 2010. However, no significant change in the flow was observed in the basin. Meanwhile, remarkable fluctuations in physicochemical parameters, including dissolved oxygen, chemical oxygen demand, conductivity, hardness, and alkalinity, were mainly observed during impoundment (2003-2009). After that, the above parameters tended to stabilize, and some even returned to their original levels. The dam's retention effect significantly reduced the suspended solids (SS) in both up- and downstream, to only one-third of the pre-operation level. And total phosphorus and chemical oxygen demand also significantly decreased with the decline of SS. Particularly, ammonium also showed a significant downward trend, with the up- and downstream of the dam falling by 36.8 % and 26.1 %, respectively. However, the increasing total nitrogen (7.5 % and 20.0 % up- and downstream of the dam, respectively) still threatened the water quality of the basin, especially in the estuaries. Additionally, the significant decline in dissolved oxygen downstream (from 8.53±1.08 mg/L to 8.11±1.36 mg/L) also exacerbated the hypoxia in the Yangtze River estuary. The results demonstrated the long-term impact of the construction of the Three Gorges Dam on the environmental elements of the Yangtze River basin, which provides reference data and guidance for the construction of big dams in major rivers in the future.

Predominance of ammonia-oxidizing archaea and nirK-gene-bearing denitrifiers among ammonia-oxidizing and denitrifying populations in sediments of a large urban eutrophic lake (Lake Donghu).

The coupled nitrification-denitrification process plays a pivotal role in cycling and removal of nitrogen in aquatic ecosystems. In the present study, the communities of ammonia oxidizers and denitrifiers in the sediments of 2 basins (Guozhenghu Basin and Tuanhu Basin) of a large urban eutrophic lake (Lake Donghu) were determined using the ammonia monooxygenase subunit A (amoA) gene and the nitrite reductase gene. At all sites of this study, the archaeal amoA gene predominated over the bacterial amoA gene, whereas the functional gene for denitrification nirK gene far outnumbered the nirS gene. Spatially, compared with the Tuanhu Basin, the Guozhenghu Basin showed a significantly greater abundance of the archaeal amoA gene but less abundance of the nirK and nirS genes, while there was no significant difference of bacterial amoA gene copy numbers between the 2 basins. Unlike the archaeal amoA gene, the nirK gene showed a significant difference in community structure between the 2 basins. Archaeal amoA diversity was limited to the water-sediment cluster of Crenarchaeota, in sharp contrast with nirK for which 22 distinct operational taxonomic units were found. Accumulation of organic substances were found to be positively related to nirK and nirS gene copy numbers but negatively related to archaeal amoA gene copy numbers, whereas the abundance of the bacterial amoA gene was related to ammonia concentration.

Metabolites of extracellular organic matter from Microcystis and Dolichospermum drive distinct modes of carbon, nitrogen, and phosphorus recycling.

Algal extracellular organic matter (EOM) metabolites exert considerable impact on the carbon (C), nitrogen (N), and phosphorus (P) cycles mediated by attached bacteria. Field investigations were conducted in two ponds to explore the relationship among EOM metabolites from Microcystis and Dolichospermum, co-occurring microbes, and nutrient recycling from April 2021 to December 2021. Microcystis blooms primarily produced more complex bound EOM (bEOM) metabolites with many amino acid components, which facilitated bacterial colonization and provided sufficient substrates for ammonification. Meanwhile, high abundances of dissimilatory nitrate reduction to ammonium genes from co-occurring microbes such as Rhodobacter have demonstrated their strong N retention ability. Metabolic products of bEOM from Microcystis comprise a large number of organic acids that can solubilize non-bioavailable P. All these factors have collectively resulted in the increase of all fractions of N and P, except for nitrate (NO3--N) in the water column. In contrast, the EOM metabolite from Dolichospermum was simple, coupled with high abundance of functional genes of α-glucosidase, and produced small molecular substances fueling denitrification. The metabolic products of EOM from Dolichospermum include abundant N-containing substances dominated by heterocyclic substances, suggesting that the metabolic products of Dolichospermum are not conducive to N regeneration and retention. Therefore, the metabolic products of EOM from Microcystis triggered a shift in the attached microbial community and function toward C, N, and P recycling with close mutual coupling. Acquisition of N and P in Dolichospermum is dependent on itself based on N fixation and organic P hydrolysis capacity. This study provides a new understanding of the contribution of algal EOM to the nutrient cycle.

Organic carbon quantity and composition jointly modulate the differentiation of nitrate reduction pathways in sediments of the Chinese eutrophic lake, Lake Chaohu.

Twelve sampling sites from two basins of Lake Chaohu were studied seasonally from June 2020 to April 2021 in Hefei City (China) to better understand the effect of organic carbon (C) quantity and composition on nitrate (NO3--N) reduction pathways. Serious algal bloom in the west basin of Lake Chaohu (WLC) resulted in higher organic C accumulation and NO3--N deficiency in interstitial water compared to the east basin of Lake Chaohu (ELC), jointly leading to a high C/NO3--N ratio. This triggered dissimilatory nitrate reduction to ammonium (DNRA) over denitrification in terms of higher DNRA rate, nitrogen retaining index (NRI), and nrfA gene abundance mediating DNRA. Furthermore, high oxygen-alkyl C and abundance of functional genes mediating labile organic C decomposition and DNRA suggested that the alkyl carbon-oxygen bond was responsible for DNRA induction. Different bacterial community composition and diversity involved in C and nitrogen (N) metabolism in two basins indicated that bacteria in sediments of WLC were more active in NO3--N reduction. Spearman correlation analysis showed that the less represented genera, such as Thiobacillus and Clostridium, were positively correlated with both organic C and NO3--N reduction rates, respectively. Hence, organic C composition could affect NO3--N reduction function by shaping the specific bacterial community.

Genistein-based reactive oxygen species-responsive nanomaterial site-specifically relieves the intestinal toxicity of endocrine-disrupting chemicals.

Endocrine-disrupting chemicals (EDCs) can disrupt the gastrointestinal endocrine system and induce oxidative stress, which eventually leads to intestinal toxicity. Genistein (Gen) has a beneficial effect on the physiological functions of the gastrointestinal tract and can alleviate EDCs damage. As an estrogen-like substance, Gen may also synergize the deleterious influence of EDCs. Therefore, the targeting and concentration of Gen must be controlled during its application. In this study, a novel reactive oxygen species (ROS)-responsive nanomaterial (Gen-NM-2) containing Tempol conjugated ß-cyclodextrin and Gen was prepared. The nano-polymer exhibits a uniform rod-like morphology with an average diameter of 833 ± 12 nm and a negative zeta-potential of -20.3 ± 3.7 mV. Gen-NM-2 protected Gen from rapid metabolism in gastrointestinal tract and displayed a strong ROS scavenging ability. In response to high ROS levels, this material can effectively locate the target site and release Gen, which then exerted its effect by reducing the ROS content and regulating the ERß signaling pathway. Owing to its high bioavailability, Gen-NM-2 at relatively low doses can reduce the intestinal cytotoxicity of EDCs, thus providing a basis for the development of EDCs detoxification therapy.

The role of sulfur cycle and enzyme activity in dissimilatory nitrate reduction processes in heterotrophic sediments.

The dissimilatory nitrate (NO3-) reduction processes (DNRPs) play an important role in regulating the nitrogen (N) balance of aquatic ecosystem. Organic carbon (OC) and sulfur are important factors that influence the DNRPs. In this study, we investigated the effects of sulfur cycle and enzyme activity on DNRPs in the natural and human-modified heterotrophic sediments. Quarterly monitoring of anaerobic ammonium oxidation, denitrification (DNF), and dissimilatory NO3- reduction to ammonium (DNRA) in sediments was conducted using 15N isotope tracing method. qPCR and high-throughput sequencing were applied to characterize the DNF and DNRA microbial abundances and communities. Results showed that instead of the OC, the glucosidase activity (GLU) was the key driver of the DNRPs. Furthermore, instead of the ratio of OC to NO3-, the GLU and the ratio of OC to sulfide (C/S) correctly indicated the partitioning of DNRPs in this study. We deduced that the sulfur reduction processes competed with the DNRPs for the available OC. In addition, the inhibitory effect of sulfide (final product of the sulfur reduction processes) on the DNRPs bacterial community were observed, which suggested a general restrictive role of the sulfur cycle in the regulation and partitioning of the DNRPs in heterotrophic sediments.

Lactobacillus crispatus-derived exopolysaccharides with antibacterial activity limit Salmonella typhimurium invasion by inhibiting inflammasome-mediated pyroptosis.

In this study, a novel heteropolysaccharide (EPS 7-4) with a molecular weight of 53 387 Da was isolated from Lactobacillus crispatus, and it was mainly composed of mannose (36.9%) and glucose (30.8%). EPS 7-4 showed excellent inhibitory effects on the proliferation, biofilm formation, and virulence factor gene expression of Salmonella typhimurium (S. typhimurium) by disrupting the integrity of the bacterial wall. Furthermore, EPS 7-4 can effectively restrict bacterial translocation, upregulate the abundance of Lactobacillus spp. and Bifidobacterium spp., and alleviate the S. typhimurium induced severe inflammatory response in the intestinal tract of mice. Besides, we demonstrated that EPS 7-4 can protect mice by inhibiting S. typhimurium induced pyroptosis, with the mechanism that EPS 7-4 affects ASC oligomerization during inflammasome-mediated pyroptosis. Therefore, due to its excellent anti-bacterial and anti-inflammatory abilities, EPS 7-4 is a promising health regulator owing to its excellent antibacterial and anti-inflammatory abilities.

Patterns of Sediment Fungal Community Dependent on Farming Practices in Aquaculture Ponds.

Despite fungi playing an important role in nutrient decomposition in aquatic ecosystems and being considered as vital actors in the ecological processes, they received limited attention regarding the community in aquaculture pond sediments which are extremely important and typically disturbed habitats. Using an ITS1 region of fungal rDNA, this study aimed to investigate sediment fungal communities in fish, crab, and crayfish ponds for decades of farming practices at representative aquaculture regions in the middle Yangtze River basin, China. We then aimed to explore the community patterns associated with species-based farming practices in the ponds at 18 farms. The results showed that the pond sediments harbored more than 9,000 operational taxonomic units. The sediments had significantly higher alpha diversity in crab ponds compared to that in fish and crayfish ponds. The fungal phyla largely belonged to Ascomycota and Chytridiomycota, and the dominance of Rozellomycota over Basidiomycota and Aphelidiomycota was observed. The majority of sediment fungal members were ascribed to unclassified fungi, with higher proportions in fish ponds than crab and crayfish ponds. Further, the fungal communities were markedly distinct among the three types of ponds, suggesting divergent patterns of fungal community assemblages caused by farming practices in aquaculture ponds. The community diversity and structure were closely correlated to sediment properties, especially sediment carbon content and pH. Thus, the distribution and pattern of fungal communities in the sediments appear to primarily depend on species-based farming practices responsible for the resulting sediment carbon content and pH in aquaculture ponds. This study provides a detailed snapshot and extension of understanding fungal community structure and variability in pond ecosystems, highlighting the impacts of farming practices on the assembly and succession of sediment fungal communities in aquaculture ponds.

Phosphorus supply pathways and mechanisms in shallow lakes with different regime.

In order to better understand the pathways and mechanisms of phosphorus (P) supply under different regimes, 12 sampling sites from 4 basins of 2 lakes were studied seasonally from October 2017 to July 2018 in Wuhan City, China. Concentrations of different forms of P and nitrogen (N) in surface and interstitial water, contents of carbon (C), N, P and iron (Fe) compounds as well as related extracellular enzymatic activities, phosphorus sorption, abundance of phosphorus-solubilizing bacteria (PSB), total and specific (containing phosphatase gene) microbial community composition in sediments were analyzed. In lakes with macrophyte dominance, P supply pathway from sediment to water column was blocked. In lakes being early period of regime shifting from macrophyte to algae, exogenous P input was the main P supply mode. In lakes being later period of regime shifting from macrophyte to algae, organic P hydrolysis and calcium-bound P dissociation driven by PSB contributed greatly to P regeneration, which was continuous and trickling. In this process, rapid C and N cycles fueled P regeneration. In lakes with algal dominance, given the significantly higher iron-bound P (Fe(OOH)~P), equilibriums phosphorus concentration and dehydrogenase activity, the main P regeneration pathway might be the desorption of Fe(OOH)~P driven by anoxia, showing the seasonal and pulsed characteristics. In addition, during the process of regime shift from macrophyte to algae, the dominant algal species switched from cyanobacteria to Chlorophyta. P-solubilizing microorganisms correlated with environmental factors, suggesting the coupling of multiple nutrient cycles, especially C, N, P, oxygen (O) and Fe, could effectively increase the pathways diversification and the strength of P regeneration.