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1.
J Theor Biol ; 251(4): 653-66, 2008 Apr 21.
Artigo em Inglês | MEDLINE | ID: mdl-18262569

RESUMO

Models that demonstrate environmental regulation as a consequence of organism and environment coupling all require a number of core assumptions. Many previous models, such as Daisyworld, require that certain environment-altering traits have a selective advantage when those traits also contribute towards global regulation. We present a model that results in the regulation of a global environmental resource through niche construction without employing this and other common assumptions. There is no predetermined environmental optimum towards which regulation should proceed assumed or coded into the model. Nevertheless, polymorphic stable states that resist perturbation emerge from the simulated co-evolution of organisms and environment. In any single simulation a series of different stable states are realised, punctuated by rapid transitions. Regulation is achieved through two main subpopulations that are adapted to slightly different resource values, which force the environmental resource in opposing directions. This maintains the resource within a comparatively narrow band over a wide range of external perturbations. Population driven oscillations in the resource appear to be instrumental in protecting the regulation against mutations that would otherwise destroy it. Sensitivity analysis shows that the regulation is robust to mutation and to a wide range of parameter settings. Given the minimal assumptions employed, the results could reveal a mechanism capable of environmental regulation through the by-products of organisms.


Assuntos
Evolução Biológica , Simulação por Computador , Ecologia , Meio Ambiente , Adaptação Fisiológica , Animais , Humanos , Modelos Biológicos , Dinâmica Populacional , Seleção Genética
2.
Biosystems ; 59(3): 185-95, 2001 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-11311467

RESUMO

In multi-component, discrete systems, such as Boolean networks and cellular automata, the scheme of updating of the individual elements plays a crucial role in determining their dynamic properties and their suitability as models of complex phenomena. Many interesting properties of these systems rely heavily on the use of synchronous updating of the individual elements. Considerations of parsimony have motivated the claim that, if the natural systems being modelled lack any clear evidence of synchronously driven elements, then random asynchronous updating should be used by default. The introduction of a random element precludes the possibility of strictly cyclic behaviour. In principle, this poses the question of whether asynchronously driven Boolean networks, cellular automata, etc., are inherently bad choices at the time of modelling rhythmic phenomena. This paper focuses on this subsidiary issue for the case of Asynchronous Random Boolean Networks (ARBNs). It defines measures of pseudo-periodicity between states and sufficiently relaxed statistical constraints. These measures are used to guide a genetic algorithm to find appropriate examples. Success in this search for a number of cases, and the subsequent statistical analysis lead to the conclusion that ARBNs can indeed be used as models of co-ordinated rhythmic phenomena, which may be stronger precisely because of their in-built asynchrony. The same technique is used to find non-stationary attractors that show no rhythm. Evidence suggests that the latter are more abundant than rhythmic attractor. The methodology is flexible, and allows for more demanding statistical conditions for defining pseudo-periodicity, and constraining the evolutionary search.


Assuntos
Modelos Biológicos , Periodicidade , Algoritmos , Modelos Genéticos , Modelos Estatísticos
3.
J Exp Biol ; 208(Pt 17): 3349-66, 2005 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-16109896

RESUMO

We use a genetic algorithm to evolve neural models of path integration, with particular emphasis on reproducing the homing behaviour of Cataglyphis fortis ants. This is done within the context of a complete model system, including an explicit representation of the animal's movements within its environment. We show that it is possible to produce a neural network without imposing a priori any particular system for the internal representation of the animal's home vector. The best evolved network obtained is analysed in detail and is found to resemble the bicomponent model of Mittelstaedt. Because of the presence of leaky integration, the model can reproduce the systematic navigation errors found in desert ants. The model also naturally mimics the searching behaviour that ants perform once they have reached their estimate of the nest location. The results support possible roles for leaky integration and cosine-shaped compass response functions in path integration.


Assuntos
Algoritmos , Formigas/fisiologia , Comportamento de Retorno ao Território Vital/fisiologia , Modelos Neurológicos , Animais , Comportamento Apetitivo/fisiologia , Genótipo , Orientação/fisiologia , Fatores de Tempo
4.
J Theor Biol ; 203(2): 135-52, 2000 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-10704298

RESUMO

The evolution of altruistic behaviour is studied in a simple action-response game with a tunable degree of conflict of interest. It is shown that for the continuous, mixed-medium approach no stable polymorphism favours altruism. Ecological dynamics are explored with the addition of a spatial dimension and a local energy variable. A continuous spatial model with finite local range does not introduce any substantial difference in the results with respect to the level of altruism. However, the model illustrates how ecological coupling may lead to the formation of stable spatial patterns in the form of discrete and isolated clusters of players as a consequence of inverse density dependence. A discrete, individual-based model is built in which local interactions are also modelled as occurring within a finite neighbourhood of each individual and spatial positions are not restricted as in lattice models. This model shows substantially different results. A high level of altruism is observed for low (but positive) degrees of conflict and this level decreases linearly for higher degrees of conflict. The evolution of altruism is explained by studying the broken symmetries introduced by the spatial clusters themselves, mainly between their central and peripheral regions which, in combination with the discrete and the stochastic nature of the model, result in the stabilization of strategies in which players behave altruistically towards the same type. As a consequence of the activity of the players, energy resources at the centre of an altruistic cluster are very depleted; so much so that, for low conflict, fitter non-altruistic mutants may initially invade only to become locally extinct due to their less efficient use of energy as their numbers increase. In peripheral regions invader may subsist; however, for geometrical reasons long-lasting genealogies tend to originate only at the centre of a cluster.


Assuntos
Altruísmo , Evolução Biológica , Ecologia , Teoria dos Jogos , Animais , Modelos Biológicos
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