Independent Vector Analysis for SSVEP Signal Enhancement, Detection, and Topographical Mapping.

Steady state visual evoked potentials (SSVEPs) have been identified as an effective solution for brain computer interface (BCI) systems as well as for neurocognitive investigations. SSVEPs can be observed in the scalp-based recordings of electroencephalogram signals, and are one component buried amongst the normal brain signals and complex noise. We present a novel method for enhancing and improving detection of SSVEPs by leveraging the rich joint blind source separation framework using independent vector analysis (IVA). IVA exploits the diversity within each dataset while preserving dependence across all the datasets. This approach is shown to enhance the detection of SSVEP signals across a range of frequencies and subjects for BCI systems. Furthermore, we show that IVA enables improved topographic mapping of the SSVEP propagation providing a promising new tool for neuroscience and neurocognitive research.

Split flow humidity generator equilibration and stability study.

Generation and control of humidity in a testing environment is crucial when evaluating a chemical vapor sensor as water vapor in the air can not only interfere with the sensor itself, but also react with a chemical analyte changing its composition. Upon constructing a split-flow humidity generator for chemical vapor sensor development, numerous issues were observed due to instability of the generated relative humidity level and drift of the humidity over time. By first fixing the initial relative humidity output of the system at 50%, we studied the effects of flowrate on stabilization time along with long term stability for extended testing events. It was found that the stabilization time can be upwards of 7 h, but can be maintained for greater than 90 h allowing for extended experiments. Once the stabilization time was known for 50% relative humidity output, additional studies at differing humidity levels and flowrates were performed to better characterize the system. At a relative humidity of 20% there was no time required to stabilize, but when increased to 80% this time increased to over 4 h. With this information we were better able to understand the generation process and characterize the humidity generation system, output stabilization and possible modifications to limit future testing issues.

Bioaerosol analysis with Raman chemical imaging microspectroscopy.

Raman chemical imaging microspectroscopy is evaluated as a technology for waterborne pathogen and bioaerosol detection. Raman imaging produces a three-dimensional data cube consisting of a Raman spectrum at every pixel in a microscope field of view. Binary and ternary mixtures including combinations of polystyrene beads, gram-positive Bacillus anthracis, B. thuringiensis, and B. atrophaeus spores, and B. cereus vegetative cells were investigated by Raman imaging for differentiation and characterization purposes. Bacillus spore aerosol sizes were varied to provide visual proof for corroboration of spectral assignments. Conventional applications of Raman imaging consist of differentiating relatively broad areas of a sample in a microscope field of view. The spectral angle mapping data analysis algorithm was used to compare a library spectrum with experimental spectra from pixels in the microscope field of view. This direct one-to-one matching is straightforward, does not require a training set, is independent of absolute spectral intensity, and only requires univariate statistics. Raman imaging is expanded in its capabilities to differentiate and distinguish between discrete 1-6 microm size bacterial species in single particles, clusters of mixed species, and bioaerosols with interference background particles.

Classification of select category A and B bacteria by Fourier transform infrared spectroscopy.

Fourier transform infrared (FT-IR) spectroscopy historically is a powerful tool for the taxonomic classification of bacteria by genus, species, and strain when they are grown under carefully controlled conditions. Relatively few reports have investigated the determination and classification of pathogens such as the National Institute of Allergy and Infectious Diseases (NIAID) Category A Bacillus anthracis spores and cells (BA), Yersinia species, Francisella tularensis (FT), and Category B Brucella species from FT-IR spectra. We investigated the multivariate statistics classification ability of the FT-IR spectra of viable pathogenic and non-pathogenic NIAID Category A and B bacteria. The impact of different growth media, growth time and temperature, rolling circle filter of the data, and wavelength range were investigated for their microorganism differentiation capability. Viability of the bacteria was confirmed by agar plate growth after the FT-IR experimental procedures were performed. Principal component analysis (PCA) was reduced to maps of two PC vectors in order to distill the FT-IR spectral features into manageable, visual presentations. The PCA results of the strains of BA, FT, Brucella, and Yersinia spectra from conditions of varying growth media and culture time were readily separable in two-dimensional (2D) PC plots. FT spectra were separated from those of the three other genera. The BA pathogenic spore strains 1029, LA1, and Ames were clearly differentiated from the rest of the dataset. Yersinia rhodei, Y. enterocolitica, and Y. pestis species were distinctly separated from the remaining dataset and could also be classified by growth media. Different growth media produced distinct subsets in the FT, BA, and Yersinia spp. regions in the 2D PC plots. Various 2D PC plots provided differential degrees of separation with respect to the four viable bacterial genera including the BA sub-categories of pathogenic spores, vegetative cells, and nonpathogenic vegetative cells. This work provided evidence that FT-IR spectroscopy can indeed separate the four major pathogenic bacterial genera of NIAID Category A and B biological threat agents including details according to the growth conditions and statistical parameters.

Semi-automated detection of trace explosives in fingerprints on strongly interfering surfaces with Raman chemical imaging.

We have previously demonstrated the use of wide-field Raman chemical imaging (RCI) to detect and identify the presence of trace explosives in contaminated fingerprints. In this current work we demonstrate the detection of trace explosives in contaminated fingerprints on strongly Raman scattering surfaces such as plastics and painted metals using an automated background subtraction routine. We demonstrate the use of partial least squares subtraction to minimize the interfering surface spectral signatures, allowing the detection and identification of explosive materials in the corrected Raman images. The resulting analyses are then visually superimposed on the corresponding bright field images to physically locate traces of explosives. Additionally, we attempt to address the question of whether a complete RCI of a fingerprint is required for trace explosive detection or whether a simple non-imaging Raman spectrum is sufficient. This investigation further demonstrates the ability to nondestructively identify explosives on fingerprints present on commonly found surfaces such that the fingerprint remains intact for further biometric analysis.