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1.
J Phys Chem A ; 128(11): 2220-2235, 2024 Mar 21.
Artigo em Inglês | MEDLINE | ID: mdl-38452262

RESUMO

We study the performance of our previously proposed projective quantum eigensolver (PQE) on IBM's quantum hardware in conjunction with error mitigation techniques. For a single qubit model of H2, we find that we are able to obtain energies within 4 millihartree (2.5 kcal/mol) of the exact energy along the entire potential energy curve, with the accuracy limited by both the stochastic error and the inconsistent performance of the IBM devices. We find that an optimization algorithm using direct inversion of the iterative subspace can converge swiftly, even to excited states, but stochastic noise can prompt large parameter updates. For the 4-site transverse-field Ising model at its critical point, PQE with an appropriate application of qubit tapering can recover 99% of the correlation energy, even after discarding several parameters. The large number of CNOT gates needed for the additional parameters introduces a concomitant error that, on the IBM devices, results in a loss of accuracy despite the increased expressivity of the trial state. Error extrapolation techniques and tapering or postselection are recommended to mitigate errors in PQE hardware experiments.

2.
J Am Chem Soc ; 145(17): 9655-9664, 2023 May 03.
Artigo em Inglês | MEDLINE | ID: mdl-37078852

RESUMO

Tropolone, a 15-atom cyclic molecule, has received much interest both experimentally and theoretically due to its H-transfer tunneling dynamics. An accurate theoretical description is challenging owing to the need to develop a high-level potential energy surface (PES) and then to simulate quantum-mechanical tunneling on this PES in full dimensionality. Here, we tackle both aspects of this challenge and make detailed comparisons with experiments for numerous isotopomers. The PES, of near CCSD(T)-quality, is obtained using a Δ-machine learning approach starting from a pre-existing low-level DFT PES and corrected by a small number of approximate CCSD(T) energies obtained using the fragmentation-based molecular tailoring approach. The resulting PES is benchmarked against DF-FNO-CCSD(T) and CCSD(T)-F12 calculations. Ring-polymer instanton calculations of the splittings, obtained with the Δ-corrected PES are in good agreement with previously reported experiments and a significant improvement over those obtained using the low-level DFT PES. The instanton path includes heavy-atom tunneling effects and cuts the corner, thereby avoiding passing through the conventional saddle-point transition state. This is in contradistinction with typical approaches based on the minimum-energy reaction path. Finally, the subtle changes in the splittings for some of the heavy-atom isotopomers seen experimentally are reproduced and explained.

3.
J Phys Chem A ; 127(31): 6567-6576, 2023 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-37523485

RESUMO

Shallow, CNOT-efficient quantum circuits are crucial for performing accurate computational chemistry simulations on current noisy quantum hardware. Here, we explore the usefulness of noniterative energy corrections, based on the method of moments of coupled-cluster theory, for accelerating convergence toward full configuration interaction. Our preliminary numerical results relying on iteratively constructed ansätze suggest that chemically accurate energies can be obtained with substantially more compact circuits, implying enhanced resilience to gate and decoherence noise.

4.
J Phys Chem A ; 127(8): 1975-1987, 2023 Mar 02.
Artigo em Inglês | MEDLINE | ID: mdl-36799901

RESUMO

We develop a multireference quantum embedding model to investigate a recent experimental observation of the isomerization of vibrationally excited CO molecules on a NaCl(100) surface [Science 2020, 367, 175-178]. To explore this mechanism, we built a reduced potential energy surface of CO interacting with NaCl(100) using a second-order multireference perturbation theory, modeling the adsorbate-surface interaction with our previously developed active space embedding theory (ASET). We considered an isolated CO molecule on NaCl(100) and a high-coverage CO monolayer (1/1), and for both we generated potential energy surfaces parametrized by the CO stretching, adsorption, and inversion coordinates. These surfaces are used to determine stationary points and adsorption energies and to perform a vibrational analysis of the states relevant to the inversion mechanism. We found that for near-equilibrium bond lengths, CO adsorbed in the C-down configuration is lower in energy than in the O-down configuration. Stretching of the C-O bond reverses the energetic order of these configurations, supporting the accepted isomerization mechanism. The vibrational constants obtained from these potential energy surfaces show a small (< 10 cm-1) blue- and red-shift for the C-down and O-down configurations, respectively, in agreement with experimental assignments and previous theoretical studies. Our vibrational analysis of the monolayer case suggests that the O-down configuration is energetically more stable than the C-down one beyond the 16th vibrational excited state of CO, a value slightly smaller than the one from quasi-classical trajectory simulations (22nd) and consistent with the experiment. Our analysis suggests that CO-CO interactions in the monolayer play an important role in stabilizing highly vibrationally excited states in the O-down configuration and reducing the barrier between the C-down and O-down geometries, therefore playing a crucial role in the inversion mechanism.

5.
J Chem Phys ; 158(12): 124112, 2023 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-37003756

RESUMO

This work examines the accuracy and precision of x-ray absorption spectra computed with a multireference approach that combines generalized active space (GAS) references with the driven similarity renormalization group (DSRG). We employ the x-ray absorption benchmark of organic molecule (XABOOM) set, consisting of 116 transitions from mostly organic molecules [Fransson et al., J. Chem. Theory Comput. 17, 1618 (2021)]. Several approximations to a full-valence active space are examined and benchmarked. Absolute excitation energies and intensities computed with the GAS-DSRG truncated to second-order in perturbation theory are found to systematically underestimate experimental and reference theoretical values. Third-order perturbative corrections significantly improve the accuracy of GAS-DSRG absolute excitation energies, bringing the mean absolute deviation from experimental values down to 0.32 eV. The ozone molecule and glyoxylic acid are particularly challenging for second-order perturbation theory and are examined in detail to assess the importance of active space truncation and intruder states.

6.
J Chem Phys ; 158(15)2023 Apr 21.
Artigo em Inglês | MEDLINE | ID: mdl-37094006

RESUMO

Theoretical simulations are critical to analyze and interpret the x-ray absorption spectrum of transient open-shell species. In this work, we propose a model of the many-body core-excited states of symmetric diradicals. We apply this model to analyze the carbon K-edge transitions of o-, m-, and p-benzyne, three organic diradicals with diverse and unusual electronic structures. The predictions of our model are compared with high-level multireference computations of the K-edge spectrum of the benzynes obtained with the driven similarity renormalization group truncated to third order. Our model shows the importance of a many-body treatment of the core-excited states of the benzynes and provides a theoretical framework to understand which properties of the ground state of these diradicals can be extracted from their x-ray spectrum.

7.
J Chem Phys ; 159(11)2023 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-37712785

RESUMO

Accurate multireference electronic structure calculations are important for constructing potential energy surfaces. Still, even in the case of low-scaling methods, their routine use is limited by the steep growth of the computational and storage costs as the active space grows. This is primarily due to the occurrence of three- and higher-body density matrices or, equivalently, their cumulants. This work examines the effect of various cumulant truncation schemes on the accuracy of the driven similarity renormalization group second-order multireference perturbation theory. We test four different levels of three-body reduced density cumulant truncations that set different classes of cumulant elements to zero. Our test cases include the singlet-triplet gap of CH2, the potential energy curves of the XΣg+1 and AΣu+3 states of N2, and the singlet-triplet splittings of oligoacenes. Our results show that both relative and absolute errors introduced by these cumulant truncations can be as small as 0.5 kcal mol-1 or less. At the same time, the amount of memory required is reduced from O(NA6) to O(NA5), where NA is the number of active orbitals. No additional regularization is needed to prevent the intruder state problem in the cumulant-truncated second-order driven similarity renormalization group multireference perturbation theory methods.

8.
J Chem Phys ; 157(6): 064111, 2022 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-35963725

RESUMO

This paper describes Wick&d, an implementation of the algebra of second-quantized operators normal ordered with respect to general correlated references and the corresponding Wick theorem [D. Mukherjee, Chem. Phys. Lett. 274, 561 (1997) and W. Kutzelnigg and D. Mukherjee, J. Chem. Phys. 107, 432 (1997)]. Wick&d employs a compact representation of operators and a backtracking algorithm to efficiently evaluate Wick contractions. Since Wick&d can handle both fully and partially contracted terms, it can be applied to both projective and Fock-space many-body formalisms. To demonstrate the usefulness of Wick&d, we use it to evaluate the single-reference coupled cluster equations up to octuple excitations and report an automated derivation and implementation of the second-order driven similarity renormalization group multireference perturbation theory.

9.
Nat Methods ; 15(2): 115-118, 2018 02.
Artigo em Inglês | MEDLINE | ID: mdl-29256495

RESUMO

Mechanical forces are integral to many biological processes; however, current techniques cannot map the magnitude and direction of piconewton molecular forces. Here, we describe molecular force microscopy, leveraging molecular tension probes and fluorescence polarization microscopy to measure the magnitude and 3D orientation of cellular forces. We mapped the orientation of integrin-based traction forces in mouse fibroblasts and human platelets, revealing alignment between the organization of force-bearing structures and their force orientations.


Assuntos
Polarização de Fluorescência/métodos , Integrinas/metabolismo , Mecanotransdução Celular , Microscopia de Força Atômica/métodos , Microscopia de Fluorescência/métodos , Sondas Moleculares/metabolismo , Fenômenos Biomecânicos , Plaquetas/metabolismo , Humanos
10.
J Chem Phys ; 155(11): 114111, 2021 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-34551530

RESUMO

We report a spin-free formulation of the multireference (MR) driven similarity renormalization group (DSRG) based on the ensemble normal ordering of Mukherjee and Kutzelnigg [J. Chem. Phys. 107, 432 (1997)]. This ensemble averages over all microstates of a given total spin quantum number, and therefore, it is invariant with respect to SU(2) transformations. As such, all equations may be reformulated in terms of spin-free quantities and they closely resemble those of spin-adapted closed-shell coupled cluster (CC) theory. The current implementation is used to assess the accuracy of various truncated MR-DSRG methods (perturbation theory up to third order and iterative methods with single and double excitations) in computing the constants of 33 first-row diatomic molecules. The accuracy trends for these first-row diatomics are consistent with our previous benchmark on a small subset of closed-shell diatomic molecules. We then present the first MR-DSRG application on transition-metal complexes by computing the spin splittings of the [Fe(H2O)6]2+ and [Fe(NH3)6]2+ molecules. A focal point analysis (FPA) shows that third-order perturbative corrections are essential to achieve reasonably converged energetics. The FPA based on the linearized MR-DSRG theory with one- and two-body operators and up to a quintuple-ζ basis set predicts the spin splittings of [Fe(H2O)6]2+ and [Fe(NH3)6]2+ to be -35.7 and -17.1 kcal mol-1, respectively, showing good agreement with the results of local CC theory with singles, doubles, and perturbative triples.

11.
Annu Rev Phys Chem ; 70: 245-273, 2019 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-30893000

RESUMO

The driven similarity renormalization group (DSRG) provides an alternative way to address the intruder state problem in quantum chemistry. In this review, we discuss recent developments of multireference methods based on the DSRG. We provide a pedagogical introduction to the DSRG and its various extensions and discuss its formal properties in great detail. In addition, we report several illustrative applications of the DSRG to molecular systems.

12.
J Chem Phys ; 152(9): 094107, 2020 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-33480706

RESUMO

Multireference computations of large-scale chemical systems are typically limited by the computational cost of quantum chemistry methods. In this work, we develop a zeroth-order active space embedding theory [ASET(0)], a simple and automatic approach for embedding any multireference dynamical correlation method based on a frozen-orbital treatment of the environment. ASET(0) is combined with the second-order multireference driven similarity renormalization group and tested on several benchmark problems, including the excitation energy of 1-octene and bond-breaking in ethane and pentyldiazene. Finally, we apply ASET(0) to study the singlet-triplet gap of p-benzyne and 9,10-anthracyne diradicals adsorbed on a NaCl surface. Our results show that despite its simplicity, ASET(0) is a powerful and sufficiently accurate embedding scheme applicable when the coupling between the fragment and the environment is in the weak to medium regime.

13.
J Chem Phys ; 152(23): 234116, 2020 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-32571040

RESUMO

This work introduces various approaches to include connected three-body terms in unitary many-body theories, focusing on the driven similarity renormalization group (DSRG). Starting from the least approximate method-the linearized DSRG truncated to one-, two-, and three-body operators [LDSRG(3)]-we develop several approximate LDSRG(3) models with reduced computational cost. Through a perturbative analysis, we motivate a family of iterative LDSRG(3)-n and -n' (n = 1, 2, 3, 4) methods that contain a subset of the LDSRG(3) diagrams. Among these variants, the LDSRG(3)-2 scheme has the same computational complexity of coupled cluster theory with singles, doubles, and triples (CCSDT), but it outperforms CCSDT in the accuracy of the predicted correlation energies. We also propose and implement two perturbative triples corrections based on the linearized DSRG truncated to one- and two-body operators augmented with recursive semi-quadratic commutators [qDSRG(2)]. The resulting qDSRG(2)+(T) approach matches the accuracy of the "gold-standard" coupled cluster theory with singles, doubles, and perturbative triples model on the energetics of twenty-eight closed-shell atoms and small molecules.

14.
J Chem Phys ; 153(10): 104108, 2020 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-32933298

RESUMO

This work explores the ability of classical electronic structure methods to efficiently represent (compress) the information content of full configuration interaction (FCI) wave functions. We introduce a benchmark set of four hydrogen model systems of different dimensionalities and distinctive electronic structures: a 1D chain, a 1D ring, a 2D triangular lattice, and a 3D close-packed pyramid. To assess the ability of a computational method to produce accurate and compact wave functions, we introduce the accuracy volume, a metric that measures the number of variational parameters necessary to achieve a target energy error. Using this metric and the hydrogen models, we examine the performance of three classical deterministic methods: (i) selected configuration interaction (sCI) realized both via an a posteriori (ap-sCI) and variational selection of the most important determinants, (ii) an a posteriori singular value decomposition (SVD) of the FCI tensor (SVD-FCI), and (iii) the matrix product state representation obtained via the density matrix renormalization group (DMRG). We find that the DMRG generally gives the most efficient wave function representation for all systems, particularly in the 1D chain with a localized basis. For the 2D and 3D systems, all methods (except DMRG) perform best with a delocalized basis, and the efficiency of sCI and SVD-FCI is closer to that of DMRG. For larger analogs of the models, the DMRG consistently requires the fewest parameters but still scales exponentially in 2D and 3D systems, and the performance of SVD-FCI is essentially equivalent to that of ap-sCI.

15.
J Chem Phys ; 152(18): 184108, 2020 May 14.
Artigo em Inglês | MEDLINE | ID: mdl-32414239

RESUMO

PSI4 is a free and open-source ab initio electronic structure program providing implementations of Hartree-Fock, density functional theory, many-body perturbation theory, configuration interaction, density cumulant theory, symmetry-adapted perturbation theory, and coupled-cluster theory. Most of the methods are quite efficient, thanks to density fitting and multi-core parallelism. The program is a hybrid of C++ and Python, and calculations may be run with very simple text files or using the Python API, facilitating post-processing and complex workflows; method developers also have access to most of PSI4's core functionalities via Python. Job specification may be passed using The Molecular Sciences Software Institute (MolSSI) QCSCHEMA data format, facilitating interoperability. A rewrite of our top-level computation driver, and concomitant adoption of the MolSSI QCARCHIVE INFRASTRUCTURE project, makes the latest version of PSI4 well suited to distributed computation of large numbers of independent tasks. The project has fostered the development of independent software components that may be reused in other quantum chemistry programs.

16.
J Chem Phys ; 151(17): 171102, 2019 Nov 07.
Artigo em Inglês | MEDLINE | ID: mdl-31703514

RESUMO

In this work, we present a time-dependent (TD) selected configuration interaction method based on our recently introduced adaptive configuration interaction (ACI). We show that ACI, in either its ground or excited state formalisms, is capable of building a compact basis for use in real-time propagation of wave functions for computing electron dynamics. TD-ACI uses an iteratively selected basis of determinants in real-time propagation capable of capturing strong correlation effects in both ground and excited states, all with an accuracy-and associated cost-tunable by the user. We apply TD-ACI to study attosecond-scale migration of charge following ionization in small molecules. We first compute attosecond charge dynamics in a benzene model to benchmark and understand the utility of TD-ACI with respect to an exact solution. Finally, we use TD-ACI to reproduce experimentally determined ultrafast charge migration dynamics in iodoacetylene. TD-ACI is shown to be a valuable benchmark theory for electron dynamics, and it represents an important step toward accurate and affordable TD multireference methods.

17.
J Chem Phys ; 150(14): 144107, 2019 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-30981256

RESUMO

We introduce two new approaches to compute near-degenerate electronic states based on the driven similarity renormalization group (DSRG) framework. The first approach is a unitary multi-state formalism based on the DSRG (MS-DSRG), whereby an effective Hamiltonian is built from a set of state-specific solutions. The second approach employs a dynamic weighting parameter to smoothly interpolate between the multi-state and the state-averaged DSRG schemes. The resulting dynamically weighted DSRG (DW-DSRG) theory incorporates the most desirable features of both multi-state approaches (ability to accurately treat many states) and state-averaged methods (correct description of avoided crossings and conical intersections). We formulate second-order perturbation theories (PT2) based on the MS- and DW-DSRG and study the potential energy curves of LiF, the conical intersection of the two lowest singlet states of NH3, and several low-lying excited states of benzene, naphthalene, and anthracene. The DW-DSRG-PT2 predicts the correct avoided crossing of LiF and avoids artifacts produced by the corresponding state-specific and multi-state theories. Excitation energies of the acenes computed with the DW-DSRG-PT2 are found to be more accurate than the corresponding state-averaged values, showing a small dependence on the number of states computed.

18.
J Chem Phys ; 151(4): 044118, 2019 Jul 28.
Artigo em Inglês | MEDLINE | ID: mdl-31370522

RESUMO

We derive and implement analytic energy gradients for the single-reference driven similarity renormalization group second-order perturbation theory (DSRG-PT2). The resulting equations possess an asymptotic scaling that is identical to that of the second-order Møller-Plesset perturbation theory (MP2), indicating that the exponential regularizer in the DSRG equations does not introduce formal difficulties in the gradient theory. We apply the DSRG-PT2 method to optimizing the geometries of 15 small molecules. The equilibrium bond lengths computed with DSRG-PT2 are found similar to those of MP2, yielding a mean absolute error of 0.0033 Å and a standard deviation of 0.0045 Å when compared with coupled cluster with singles, doubles, and perturbative triples.

19.
J Chem Phys ; 151(24): 244112, 2019 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-31893918

RESUMO

A formal analysis is conducted on the exactness of various forms of unitary coupled cluster (UCC) theory based on particle-hole excitation and de-excitation operators. Both the conventional single exponential UCC parameterization and a factorized (referred to here as "disentangled") version are considered. We formulate a differential cluster analysis to determine the UCC amplitudes corresponding to a general quantum state. The exactness of conventional UCC (ability to represent any state) is explored numerically, and it is formally shown to be determined by the structure of the critical points of the UCC exponential mapping. A family of disentangled UCC wave functions is proven to exactly parameterize any state, thus showing how to construct Trotter-error-free parameterizations of UCC for applications in quantum computing. From these results, we construct an exact disentangled UCC parameterization that employs an infinite sequence of particle-hole or general one- and two-body substitution operators.

20.
J Chem Phys ; 149(3): 030901, 2018 Jul 21.
Artigo em Inglês | MEDLINE | ID: mdl-30037266

RESUMO

Predicting the electronic structure and properties of molecular systems that display strong electron correlation effects continues to remain a fundamental theoretical challenge. This perspective discusses the recent progress and current challenges in multireference wave function methods for dynamical electron correlation, focusing on systematically improvable methods that go beyond the limitations of configuration interaction and perturbation theory.

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