Detalhe da pesquisa
1.
Relationships between residue Voronoi volume and sequence conservation in proteins.
Biochim Biophys Acta Proteins Proteom
; 1866(2): 379-386, 2018 Feb.
Artigo
Inglês
| MEDLINE | ID: mdl-28911812
2.
On the relationship between residue structural environment and sequence conservation in proteins.
Proteins
; 85(9): 1713-1723, 2017 Sep.
Artigo
Inglês
| MEDLINE | ID: mdl-28597979
3.
(PS)2: protein structure prediction server version 3.0.
Nucleic Acids Res
; 43(W1): W338-42, 2015 Jul 01.
Artigo
Inglês
| MEDLINE | ID: mdl-25943546
4.
MIB: Metal Ion-Binding Site Prediction and Docking Server.
J Chem Inf Model
; 56(12): 2287-2291, 2016 12 27.
Artigo
Inglês
| MEDLINE | ID: mdl-27976886
5.
On the packing density of the unbound protein-protein interaction interface and its implications in dynamics.
BMC Bioinformatics
; 16 Suppl 1: S7, 2015.
Artigo
Inglês
| MEDLINE | ID: mdl-25708145
6.
The conservation profile of a protein bears the imprint of the molecule that is evolutionarily coupled to the protein.
Proteins
; 83(8): 1407-13, 2015 Aug.
Artigo
Inglês
| MEDLINE | ID: mdl-25846748
7.
Site-specific structural constraints on protein sequence evolutionary divergence: local packing density versus solvent exposure.
Mol Biol Evol
; 31(1): 135-9, 2014 Jan.
Artigo
Inglês
| MEDLINE | ID: mdl-24109601
8.
A mechanistic stress model of protein evolution accounts for site-specific evolutionary rates and their relationship with packing density and flexibility.
BMC Evol Biol
; 14: 78, 2014 Apr 09.
Artigo
Inglês
| MEDLINE | ID: mdl-24716445
9.
pKNOT v.2: the protein KNOT web server.
Nucleic Acids Res
; 40(Web Server issue): W228-31, 2012 Jul.
Artigo
Inglês
| MEDLINE | ID: mdl-22693223
10.
CPred: a web server for predicting viable circular permutations in proteins.
Nucleic Acids Res
; 40(Web Server issue): W232-7, 2012 Jul.
Artigo
Inglês
| MEDLINE | ID: mdl-22693212
11.
On the relationship between the sequence conservation and the packing density profiles of the protein complexes.
Proteins
; 81(7): 1192-9, 2013 Jul.
Artigo
Inglês
| MEDLINE | ID: mdl-23408640
12.
Functional investigation of transmembrane helix 3 in Hâº-translocating pyrophosphatase.
J Membr Biol
; 246(12): 959-66, 2013 Dec.
Artigo
Inglês
| MEDLINE | ID: mdl-24121627
13.
Evolutionary information hidden in a single protein structure.
Proteins
; 80(6): 1647-57, 2012 Jun.
Artigo
Inglês
| MEDLINE | ID: mdl-22454236
14.
Computational analysis of a novel mutation in ETFDH gene highlights its long-range effects on the FAD-binding motif.
BMC Struct Biol
; 11: 43, 2011 Oct 21.
Artigo
Inglês
| MEDLINE | ID: mdl-22013910
15.
(PS)2-v2: template-based protein structure prediction server.
BMC Bioinformatics
; 10: 366, 2009 Oct 31.
Artigo
Inglês
| MEDLINE | ID: mdl-19878598
16.
pKNOT: the protein KNOT web server.
Nucleic Acids Res
; 35(Web Server issue): W420-4, 2007 Jul.
Artigo
Inglês
| MEDLINE | ID: mdl-17526524
17.
KinasePhos 2.0: a web server for identifying protein kinase-specific phosphorylation sites based on sequences and coupling patterns.
Nucleic Acids Res
; 35(Web Server issue): W588-94, 2007 Jul.
Artigo
Inglês
| MEDLINE | ID: mdl-17517770
18.
Membrane protein-regulated networks across human cancers.
Nat Commun
; 10(1): 3131, 2019 07 16.
Artigo
Inglês
| MEDLINE | ID: mdl-31311925
19.
Predicting RNA-binding sites of proteins using support vector machines and evolutionary information.
BMC Bioinformatics
; 9 Suppl 12: S6, 2008 Dec 12.
Artigo
Inglês
| MEDLINE | ID: mdl-19091029
20.
Deriving protein dynamical properties from weighted protein contact number.
Proteins
; 72(3): 929-35, 2008 Aug 15.
Artigo
Inglês
| MEDLINE | ID: mdl-18300253