Detalhe da pesquisa
1.
Accurate positioning of functional residues with robotics-inspired computational protein design.
Proc Natl Acad Sci U S A
; 119(11): e2115480119, 2022 03 15.
Artigo
Inglês
| MEDLINE | ID: mdl-35254891
2.
Macromolecular modeling and design in Rosetta: recent methods and frameworks.
Nat Methods
; 17(7): 665-680, 2020 07.
Artigo
Inglês
| MEDLINE | ID: mdl-32483333
3.
Caulobacter crescentus Hfq structure reveals a conserved mechanism of RNA annealing regulation.
Proc Natl Acad Sci U S A
; 116(22): 10978-10987, 2019 05 28.
Artigo
Inglês
| MEDLINE | ID: mdl-31076551
4.
Novel sampling strategies and a coarse-grained score function for docking homomers, flexible heteromers, and oligosaccharides using Rosetta in CAPRI rounds 37-45.
Proteins
; 88(8): 973-985, 2020 08.
Artigo
Inglês
| MEDLINE | ID: mdl-31742764
5.
Plasma Cells Are the Most Abundant Gluten Peptide MHC-expressing Cells in Inflamed Intestinal Tissues From Patients With Celiac Disease.
Gastroenterology
; 156(5): 1428-1439.e10, 2019 Apr.
Artigo
Inglês
| MEDLINE | ID: mdl-30593798
6.
Modeling oblong proteins and water-mediated interfaces with RosettaDock in CAPRI rounds 28-35.
Proteins
; 85(3): 479-486, 2017 03.
Artigo
Inglês
| MEDLINE | ID: mdl-27667482
7.
Robustification of RosettaAntibody and Rosetta SnugDock.
PLoS One
; 16(3): e0234282, 2021.
Artigo
Inglês
| MEDLINE | ID: mdl-33764990
8.
Directed evolution for high functional production and stability of a challenging G protein-coupled receptor.
Sci Rep
; 11(1): 8630, 2021 04 21.
Artigo
Inglês
| MEDLINE | ID: mdl-33883583
9.
An expanded benchmark for antibody-antigen docking and affinity prediction reveals insights into antibody recognition determinants.
Structure
; 29(6): 606-621.e5, 2021 06 03.
Artigo
Inglês
| MEDLINE | ID: mdl-33539768
10.
The structural basis of PTEN regulation by multi-site phosphorylation.
Nat Struct Mol Biol
; 28(10): 858-868, 2021 10.
Artigo
Inglês
| MEDLINE | ID: mdl-34625746
11.
A compact vocabulary of paratope-epitope interactions enables predictability of antibody-antigen binding.
Cell Rep
; 34(11): 108856, 2021 03 16.
Artigo
Inglês
| MEDLINE | ID: mdl-33730590
12.
A high-affinity human TCR-like antibody detects celiac disease gluten peptide-MHC complexes and inhibits T cell activation.
Sci Immunol
; 6(62)2021 08 20.
Artigo
Inglês
| MEDLINE | ID: mdl-34417258
13.
Non-H3 CDR template selection in antibody modeling through machine learning.
PeerJ
; 7: e6179, 2019.
Artigo
Inglês
| MEDLINE | ID: mdl-30648015
14.
Toward the computational design of protein crystals with improved resolution.
Acta Crystallogr D Struct Biol
; 75(Pt 11): 1015-1027, 2019 Nov 01.
Artigo
Inglês
| MEDLINE | ID: mdl-31692475
15.
Repertoire Analysis of Antibody CDR-H3 Loops Suggests Affinity Maturation Does Not Typically Result in Rigidification.
Front Immunol
; 9: 413, 2018.
Artigo
Inglês
| MEDLINE | ID: mdl-29545810
16.
Targeting the CoREST complex with dual histone deacetylase and demethylase inhibitors.
Nat Commun
; 9(1): 53, 2018 01 04.
Artigo
Inglês
| MEDLINE | ID: mdl-29302039
17.
Acidic C-terminal domains autoregulate the RNA chaperone Hfq.
Elife
; 62017 08 09.
Artigo
Inglês
| MEDLINE | ID: mdl-28826489
18.
Modeling and docking of antibody structures with Rosetta.
Nat Protoc
; 12(2): 401-416, 2017 02.
Artigo
Inglês
| MEDLINE | ID: mdl-28125104
19.
Correction to "The Rosetta All-Atom Energy Function for Macromolecular Modeling and Design".
J Chem Theory Comput
; 18(7): 4594, 2022 Jul 12.
Artigo
Inglês
| MEDLINE | ID: mdl-35667008
20.
The Rosetta All-Atom Energy Function for Macromolecular Modeling and Design.
J Chem Theory Comput
; 13(6): 3031-3048, 2017 Jun 13.
Artigo
Inglês
| MEDLINE | ID: mdl-28430426