Graph similarity drives zeolite diffusionless transformations and intergrowth.

Predicting and directing polymorphic transformations is a critical challenge in zeolite synthesis1-3. Interzeolite transformations enable selective crystallization4-7, but are often too complex to be designed by comparing crystal structures. Here, computational and theoretical tools are combined to both exhaustively data mine polymorphic transformations reported in the literature and analyse and explain interzeolite relations. It was found that crystallographic building units are weak predictors of topology interconversion and insufficient to explain intergrowth. By introducing a supercell-invariant metric that compares crystal structures using graph theory, we show that diffusionless (topotactic and reconstructive) transformations occur only between graph-similar pairs. Furthermore, all the known instances of intergrowth occur between either structurally similar or graph similar frameworks. We identify promising pairs to realize diffusionless transformations and intergrowth, with hundreds of low-distance pairs identified among known zeolites, and thousands of hypothetical frameworks connected to known zeolite counterparts. The theory may enable the understanding and control of zeolite polymorphism.

Inorganic Materials Synthesis Planning with Literature-Trained Neural Networks.

Leveraging new data sources is a key step in accelerating the pace of materials design and discovery. To complement the strides in synthesis planning driven by historical, experimental, and computed data, we present an automated, unsupervised method for connecting scientific literature to inorganic synthesis insights. Starting from the natural language text, we apply word embeddings from language models, which are fed into a named entity recognition model, upon which a conditional variational autoencoder is trained to generate syntheses for any inorganic materials of interest. We show the potential of this technique by predicting precursors for two perovskite materials, using only training data published over a decade prior to their first reported syntheses. We demonstrate that the model learns representations of materials corresponding to synthesis-related properties and that the model's behavior complements the existing thermodynamic knowledge. Finally, we apply the model to perform synthesizability screening for proposed novel perovskite compounds.

ZeoSyn: A Comprehensive Zeolite Synthesis Dataset Enabling Machine-Learning Rationalization of Hydrothermal Parameters.

Zeolites, nanoporous aluminosilicates with well-defined porous structures, are versatile materials with applications in catalysis, gas separation, and ion exchange. Hydrothermal synthesis is widely used for zeolite production, offering control over composition, crystallinity, and pore size. However, the intricate interplay of synthesis parameters necessitates a comprehensive understanding of synthesis-structure relationships to optimize the synthesis process. Hitherto, public zeolite synthesis databases only contain a subset of parameters and are small in scale, comprising up to a few thousand synthesis routes. We present ZeoSyn, a dataset of 23,961 zeolite hydrothermal synthesis routes, encompassing 233 zeolite topologies and 921 organic structure-directing agents (OSDAs). Each synthesis route comprises comprehensive synthesis parameters: 1) gel composition, 2) reaction conditions, 3) OSDAs, and 4) zeolite products. Using ZeoSyn, we develop a machine learning classifier to predict the resultant zeolite given a synthesis route with >70% accuracy. We employ SHapley Additive exPlanations (SHAP) to uncover key synthesis parameters for >200 zeolite frameworks. We introduce an aggregation approach to extend SHAP to all building units. We demonstrate applications of this approach to phase-selective and intergrowth synthesis. This comprehensive analysis illuminates the synthesis parameters pivotal in driving zeolite crystallization, offering the potential to guide the synthesis of desired zeolites. The dataset is available at https://github.com/eltonpan/zeosyn_dataset.

Discovering Relationships between OSDAs and Zeolites through Data Mining and Generative Neural Networks.

Organic structure directing agents (OSDAs) play a crucial role in the synthesis of micro- and mesoporous materials especially in the case of zeolites. Despite the wide use of OSDAs, their interaction with zeolite frameworks is poorly understood, with researchers relying on synthesis heuristics or computationally expensive techniques to predict whether an organic molecule can act as an OSDA for a certain zeolite. In this paper, we undertake a data-driven approach to unearth generalized OSDA-zeolite relationships using a comprehensive database comprising of 5,663 synthesis routes for porous materials. To generate this comprehensive database, we use natural language processing and text mining techniques to extract OSDAs, zeolite phases, and gel chemistry from the scientific literature published between 1966 and 2020. Through structural featurization of the OSDAs using weighted holistic invariant molecular (WHIM) descriptors, we relate OSDAs described in the literature to different types of cage-based, small-pore zeolites. Lastly, we adapt a generative neural network capable of suggesting new molecules as potential OSDAs for a given zeolite structure and gel chemistry. We apply this model to CHA and SFW zeolites generating several alternative OSDA candidates to those currently used in practice. These molecules are further vetted with molecular mechanics simulations to show the model generates physically meaningful predictions. Our model can automatically explore the OSDA space, reducing the amount of simulation or experimentation needed to find new OSDA candidates.

A priori control of zeolite phase competition and intergrowth with high-throughput simulations.

Zeolites are versatile catalysts and molecular sieves with large topological diversity, but managing phase competition in zeolite synthesis is an empirical, labor-intensive task. In this work, we controlled phase selectivity in templated zeolite synthesis from first principles by combining high-throughput atomistic simulations, literature mining, human-computer interaction, synthesis, and characterization. Proposed binding metrics distilled from more than 586,000 zeolite-molecule simulations reproduced the extracted literature and rationalized framework competition in the design of organic structure-directing agents. Energetic, geometric, and electrostatic descriptors of template molecules were found to regulate synthetic accessibility windows and aluminum distributions in pure-phase zeolites. Furthermore, these parameters allowed us to realize an intergrowth zeolite through a single bi-selective template. The computation-first approach enables control of both zeolite synthesis and structure composition using a priori theoretical descriptors.

A Machine Learning Approach to Zeolite Synthesis Enabled by Automatic Literature Data Extraction.

Zeolites are porous, aluminosilicate materials with many industrial and "green" applications. Despite their industrial relevance, many aspects of zeolite synthesis remain poorly understood requiring costly trial and error synthesis. In this paper, we create natural language processing techniques and text markup parsing tools to automatically extract synthesis information and trends from zeolite journal articles. We further engineer a data set of germanium-containing zeolites to test the accuracy of the extracted data and to discover potential opportunities for zeolites containing germanium. We also create a regression model for a zeolite's framework density from the synthesis conditions. This model has a cross-validated root mean squared error of 0.98 T/1000 Å3, and many of the model decision boundaries correspond to known synthesis heuristics in germanium-containing zeolites. We propose that this automatic data extraction can be applied to many different problems in zeolite synthesis and enable novel zeolite morphologies.