Detalhe da pesquisa
1.
Improved global protein homolog detection with major gains in function identification.
Proc Natl Acad Sci U S A
; 120(9): e2211823120, 2023 02 28.
Artigo
Inglês
| MEDLINE | ID: mdl-36827259
2.
Predicting allosteric pockets in protein biological assemblages.
Bioinformatics
; 39(5)2023 05 04.
Artigo
Inglês
| MEDLINE | ID: mdl-37115636
3.
Characterizing interactions in E-cadherin assemblages.
Biophys J
; 122(15): 3069-3077, 2023 08 08.
Artigo
Inglês
| MEDLINE | ID: mdl-37345249
4.
Coarse-graining protein structures into their dynamic communities with DCI, a dynamic community identifier.
Bioinformatics
; 38(10): 2727-2733, 2022 05 13.
Artigo
Inglês
| MEDLINE | ID: mdl-35561187
5.
hdANM: a new comprehensive dynamics model for protein hinges.
Biophys J
; 120(22): 4955-4965, 2021 11 16.
Artigo
Inglês
| MEDLINE | ID: mdl-34687719
6.
Structure and function of LCI1: a plasma membrane CO2 channel in the Chlamydomonas CO2 concentrating mechanism.
Plant J
; 102(6): 1107-1126, 2020 06.
Artigo
Inglês
| MEDLINE | ID: mdl-32168387
7.
New amino acid substitution matrix brings sequence alignments into agreement with structure matches.
Proteins
; 89(6): 671-682, 2021 06.
Artigo
Inglês
| MEDLINE | ID: mdl-33469973
8.
Xyloglucan Xylosyltransferase 1 Displays Promiscuity Toward Donor Substrates During in Vitro Reactions.
Plant Cell Physiol
; 62(12): 1890-1901, 2021 Dec 27.
Artigo
Inglês
| MEDLINE | ID: mdl-34265062
9.
Simulated Drug Efflux for the AbgT Family of Membrane Transporters.
J Chem Inf Model
; 61(11): 5673-5681, 2021 11 22.
Artigo
Inglês
| MEDLINE | ID: mdl-34714659
10.
Opinion: Protein folds vs. protein folding: Differing questions, different challenges.
Proc Natl Acad Sci U S A
; 120(1): e2214423119, 2023 01 03.
Artigo
Inglês
| MEDLINE | ID: mdl-36580595
11.
Structural compliance: A new metric for protein flexibility.
Proteins
; 88(11): 1482-1492, 2020 11.
Artigo
Inglês
| MEDLINE | ID: mdl-32548853
12.
Knowledge-based entropies improve the identification of native protein structures.
Proc Natl Acad Sci U S A
; 114(11): 2928-2933, 2017 03 14.
Artigo
Inglês
| MEDLINE | ID: mdl-28265078
13.
Coupling dynamics and evolutionary information with structure to identify protein regulatory and functional binding sites.
Proteins
; 87(10): 850-868, 2019 10.
Artigo
Inglês
| MEDLINE | ID: mdl-31141211
14.
Combinatorial biosynthesis and the basis for substrate promiscuity in class I diterpene synthases.
Metab Eng
; 55: 44-58, 2019 09.
Artigo
Inglês
| MEDLINE | ID: mdl-31220664
15.
Molecular determinants of cadherin ideal bond formation: Conformation-dependent unbinding on a multidimensional landscape.
Proc Natl Acad Sci U S A
; 113(39): E5711-20, 2016 09 27.
Artigo
Inglês
| MEDLINE | ID: mdl-27621473
16.
Entropy, Fluctuations, and Disordered Proteins.
Entropy (Basel)
; 21(8)2019 Aug.
Artigo
Inglês
| MEDLINE | ID: mdl-32336912
17.
Directional Force Originating from ATP Hydrolysis Drives the GroEL Conformational Change.
Biophys J
; 112(8): 1561-1570, 2017 Apr 25.
Artigo
Inglês
| MEDLINE | ID: mdl-28445748
18.
Altered dynamics upon oligomerization corresponds to key functional sites.
Proteins
; 85(8): 1422-1434, 2017 Aug.
Artigo
Inglês
| MEDLINE | ID: mdl-28383162
19.
Dynamic Allostery Mediated by a Conserved Tryptophan in the Tec Family Kinases.
PLoS Comput Biol
; 12(3): e1004826, 2016 Mar.
Artigo
Inglês
| MEDLINE | ID: mdl-27010561
20.
Crystal structure of the CusBA heavy-metal efflux complex of Escherichia coli.
Nature
; 470(7335): 558-62, 2011 Feb 24.
Artigo
Inglês
| MEDLINE | ID: mdl-21350490