Molecular characterization of a novel mycovirus from binucleate Rhizoctonia AG-A strain A46.

The complete genome sequence of a positive-sense single-stranded RNA (+ ssRNA) virus, Rhizoctonia beny-like virus 1 (RBLV1), isolated from binucleate Rhizoctonia AG-A strain A46, was determined. The RBLV1 genome is 10,280 nt in length and contains a short stretch of adenines at the 3' terminus. It contains a single open reading frame (ORF) encoding a 376.30-kDa protein with viral helicase and RNA-dependent RNA polymerase (RdRp) motifs. The encoded protein exhibited the highest sequence similarity to Rhizoctonia cerealis beny-like virus 0928-1 (RcBeLV 0928-1, 45.25%), with a sequence coverage of 63%. Phylogenetic analysis based on ORF protein sequences revealed that RBLV1 is a novel unclassified mycovirus.

Identification and nucleotide sequencing of a novel partitivirus derived from Rhizoctonia solani AG-4 HG III isolate A14.

Rhizoctonia solani is a widely disseminated phytopathogen that is found in the soil and is capable of harming many important species of crops. Here, analysis of the R. solani AG-4 HG III strain A14 led to the identification of a novel mycovirus assigned the tentative name "Rhizoctonia solani partitivirus A14" (RsPV-A14), which was subjected to sequencing and associated analyses. This approach revealed that RsPV-A14 harbored two dsRNA segments, 2022 bp (dsRNA1) and 1905 bp (dsRNA2) in length. dsRNA1 was found to contain a single open reading frame (ORF1) that codes for a 622-amino-acid protein with conserved RNA-dependent RNA polymerase (RdRp) motifs, and dsRNA2 was found to contain an ORF (ORF2) that is predicted to code for a 558-amino-acid capsid protein (CP). BLASTp analysis using the putative RdRp of RsPV-A14 showed sequence similarity to partitiviruses, including Rosellinia necatrix partitivirus 7 (50.53% identity), an unclassified partitivirus. Phylogenetic analysis based on RdRp protein sequences suggested that RsPV-A14 is a novel member of the family Partitiviridae.

Recent Progress in MOF-Based Electrochemical Sensors for Non-Enzymatic Glucose Detection.

In recent years, substantial advancements have been made in the development of enzyme-free glucose sensors utilizing pristine metal-organic frameworks (MOFs) and their combinations. This paper provides a comprehensive exploration of various MOF-based glucose sensors, encompassing monometallic MOF sensors as well as multi-metal MOF combinations. These approaches demonstrate improved glucose detection capabilities, facilitated by the augmented surface area and availability of active sites within the MOF structures. Furthermore, the paper delves into the application of MOF complexes and derivatives in enzyme-free glucose sensing. Derivatives incorporating carbon or metal components, such as carbon cloth synthesis, rGO-MOF composites, and core-shell structures incorporating noble metals, exhibit enhanced electrochemical performance. Additionally, the integration of MOFs with foams or biomolecules, such as porphyrins, enhances the electrocatalytic properties for glucose detection. Finally, this paper concludes with an outlook on the future development prospects of enzyme-free glucose MOF sensors.

A novel alphapartitivirus from binucleate Rhizoctonia fumigata AG-Ba isolate C-314 Baishi.

The full-length nucleotide sequence and genome organization of a novel mycovirus designated as "Rhizoctonia fumigata partitivirus 1" (RfPV1) from Rhizoctonia fumigata AG-Ba strain C-314 Baishi was determined. The genome of RfPV1 consists of two double-stranded RNAs (dsRNAs): dsRNA1 (2003 bp) and dsRNA2 (1802 bp). Each of the two dsRNAs contains one open reading frame, coding for a putative RNA-dependent RNA polymerase and a coat protein, respectively. The 5' untranslated regions (UTRs) of both dsRNAs were conserved, and the 3'-UTRs of the two dsRNAs had interrupted poly(A) tails, similar to other partitiviruses. Phylogenetic analysis indicated that RfPV1 is a new species in the genus Alphapartitivirus, family Partitiviridae.

Complete nucleotide sequence of a novel alphapartitivirus from Rhizoctonia solani AG-4 HG III isolate SM03.

In this report, the full genome sequence of a novel mycovirus, designated as "Rhizoctonia solani partitivirus SM03" (RsPV-SM03), was determined in Rhizoctonia solani AG-4 HG III isolate SM03. RsPV-SM03 genome consists of two dsRNAs (dsRNA-1 and dsRNA-2), each of them contains one single open reading frame (ORF). ORF1 of dsRNA-1 encodes a putative RNA-dependent RNA polymerase (RdRp), while ORF2 of dsRNA-2 encodes a putative viral coat protein (CP). Phylogenetic analysis indicated that the RdRp and CP of RsPV-SM03 are closely related to those of other members of the genus Alphapartitivirus, family Partitiviridae, suggesting that RsPV-SM03 represents a novel species in the genus Alphapartitivirus.

Complete nucleotide sequence of a novel mycovirus infecting Rhizoctonia fumigata AG-Ba isolate C-314 Baishi.

The complete nucleotide sequence of a novel mycovirus, designated as "Rhizoctonia fumigata bipartite virus 1" (RfBV1), from Rhizoctonia fumigata AG-Ba isolate C-314 Baishi was determined. The genome of RfBV1 is composed of two double-stranded RNAs (dsRNA). dsRNA-1 (2311 bp) contains one open reading frame (ORF), which codes for the putative RNA-dependent RNA polymerase (RdRp) of the virus. dsRNA-2 (1690 bp) contains one ORF, which encodes a putative protein whose function is unknown. Phylogenetic analysis indicated that the RdRp of RfBV1 clustered with several unassigned bipartite viruses belonging to the CThTV-like viruses group, but not the family Amalgaviridae or Partitiviridae. Our study suggests that RfBV1 is a novel mycovirus related to the CThTV-like viruses.

Complete genome sequence of a novel mitovirus from binucleate Rhizoctonia AG-K strain FAS2909W.

The full-length AU-rich (63.14%) 2,794-nucleotide sequence of Rhizoctonia mitovirus K1 (RMV-K1) isolated from the binucleate AG-K strain FAS2909W was determined. The positive strand of RMV-K1 contains a large open reading frame (ORF) when the fungal mitochondrial genetic code is used. This ORF was predicted to encode an RdRp protein exhibiting the highest sequence identity (41.77%) to Rhizoctonia solani mitovirus 30. Phylogenetic analysis showed that RMV-K1 is a novel member of the genus Mitovirus, family Mitoviridae.

Phosphate fertilizers facilitated the Cd contaminated soil remediation by sepiolite: Cd mobilization, plant toxicity, and soil microbial community.

In-situ immobilization does not remove Cd from the contaminated soil. It is vital to investigate the effects of fertilizers on soil Cd mobility during remediation with amendments. In the current study, a pot experiment was conducted to investigate the effects of calcium magnesium phosphate (CMP) and calcium superphosphate (SSP) on the remediation of Cd-contaminated soil by sepiolite. We mainly focused on changes in soil Cd immobilization, plant toxicity, and soil microbial communities after applying two phosphates during Cd-contaminated soil remediation by sepiolite. The results demonstrated that sepiolite decreased Cd concentration in brown rice, straw, and roots by 32.66%, 38.89%, and 30.94%, respectively. During soil remediation by sepiolite, the Cd concentrations of brown rice and straw were not affected by CMP or SSP, except for the treatment with sepiolite plus high-dose CMP. Sepiolite significantly decreased HCl-extractable Cd and DTPA-extractable Cd by 32.21% and 10.50%, respectively. During soil remediation by sepiolite, the HCl-extractable and DTPA-extractable Cd further decreased with CMP or SSP. The decreasing amplitude with CMP was 40.57-72.60% and 7.05-14.53%, and that of SSP was 37.68-59.66% and 20.71-25.07%, respectively. The superoxide dismutase, peroxidase, catalase activities, and malondialdehyde concentration in rice roots decreased inordinately with the addition of sepiolite, CMP, and SSP, indicating that the application of sepiolite, CMP, or SSP alleviated Cd-induced rice root stress and protected rice roots from Cd toxicity. Alpha diversity estimators (including the Chao, ACE, and Shannon indices) indicated that sepiolite, CMP, or SSP applications had no adverse effects on soil bacterial richness and diversity. Hierarchical clustering analysis revealed that the two phosphate fertilizers and sepiolite were the main factors affecting changes in the bacterial communities structure. Redundancy analysis revealed that soil pH, Eh, and soil-extractable Cd were critical factors affecting the structure of the bacterial communities.

Molecular characterization of a novel mycovirus isolated from Rhizoctonia solani AG-1 IA strain 9-11.

The complete genome sequence of a double-stranded RNA (dsRNA) virus, Rhizoctonia solani dsRNA virus 11 (RsRV11), isolated from Rhizoctonia solani AG-1 IA strain 9-11 was determined. The RsRV11 genome is 9,555 bp in length and contains three conserved domains: structural maintenance of chromosomes (SMC) superfamily, phosphoribulokinase (PRK), and RNA-dependent RNA polymerase (RdRp). The RsRV11 genome has two non-overlapping open reading frames (ORFs). ORF1 is predicted to encode a 204.12-kDa protein that shares low but significant amino acid sequence similarity with a putative protein encoded by Rhizoctonia solani RNA virus HN008 (RsRV-HN008). ORF2 potentially encodes a 132.41-kDa protein that contains the conserved domain of the RdRp. Phylogenetic analysis indicated that RsRV11 clustered with RsRV-HN008 in a separate clade from other virus families. This implies that RsRV11 and RsRV-HN008 should be included in a new mycovirus taxon close to the family Megabirnaviridae and that RsRV11 is a new mycovirus.

Transcriptome analyses and weighted gene coexpression network analysis reveal key pathways and genes involved in the rapid cold resistance of the Chinese white wax scale insect.

The Chinese white wax scale insect, Ericerus pela, is an important resource insect in China. The rapid response of E. pela to decreasing temperatures plays key roles in the population distribution. In this study, we analyzed the gene expression of E. pela treated with low temperature using transcriptome analyses and weighted gene coexpression network analysis (WGCNA). The results showed that the cold resistance of E. pela involved changes in the expression of many genes. The genes were mainly involved in alcohol formation activity, lipid metabolism, membrane and structure, and oxidoreductase activity. According to the WGCNA results, some pathways related to cold resistance were found in the genes in the modules, such as cytoskeleton proteins, cytoskeleton protein pathway, biosynthesis of unsaturated fatty acids, glycerophospholipid metabolism, ether lipid metabolism, and thermogenesis. Some of the hub genes were nonspecific lipid-transfer proteins, DnaJ homolog subfamily C member 13, paramyosin, tropomodulin, and tubulin beta chain. In particular, the hub genes of the tan module included the heat shock protein (hsp) 10, hsp 60, hsp 70, and hsp 90 genes. Thirty-five antifreeze protein (afp) genes were identified according to the annotation results. Three afp genes were further identified among the hub genes. Six of these genes were selected for heterogeneous protein expression. One of them was expressed successfully. The thermal hysteresis activity (THA) analyses showed that the THA was 1.73°C. These results showed that the cytoskeleton, lipid metabolism, thermogenesis, HSPs and AFPs may play important roles in the cold resistance of E. pela.

Cellulomonas endophytica sp. nov., isolated from Gastrodia elata Blume.

A Gram-stain-positive, facultatively anaerobic and non-motile strain, designated SYSUP0004T, was isolated from the tubers of Gastrodia elata Blume collected from Yunnan Province, PR China. The 16S rRNA gene sequence result showed that the strain SYSUP0004T shared low similarity (97.7 %) with the type strain of Cellulomonas marina. SYSUP0004T grew at pH 6.0-9.0 (optimum, pH 8.0), temperature 4-30 °C (optimum, 28 °C) and could tolerate NaCl up to 4 % w/v (optimum in the absence of NaCl). The cell-wall peptidoglycan type was A4ß with an interpeptide bridge l-ornithine-d-glutamic acid. Cell-wall sugars were mannose, ribose, glucose, galactose and fucose. The menaquinone was MK-9(H4). The major fatty acids were anteiso-C15:0, anteiso-C15 : 1 A, C16 : 0 and anteiso-C17 : 0. The polar lipids of SYSUP0004T were diphosphatidylglycerol, unidentified phosphoglycolipid, phosphatidylinositol mannosides and unidentified glycolipid. The genomic DNA G+C content was 76.5 %. The average nucleotide identity values between SYSUP0004T and members of the genus Cellulomonas were below the cut-off level (95-96 %) recommended as the ANI criterion for interspecies identity. Thus, based on the above results strain SYSUP0004T represents a novel species of the genus Cellulomonas, for which the name Cellulomonas endophytica sp. nov. is proposed. The type strain, SYSUP0004T (=KCTC 49025T=CGMCC 1.16405T).

In situ formation of Co3O4 hollow nanocubes on carbon cloth-supported NiCo2O4 nanowires and their enhanced performance in non-enzymatic glucose sensing.

Diabetes is a chronic disease that can seriously affect human health. Therefore it is important to develop a rapid and highly sensitive enzyme-free glucose sensor to aid the treatment of diabetes. In this work, homogeneous NiCo2O4 nanowire arrays were synthesized in an orderly fashion on flexible carbon cloth (CC) by a facile hydrothermal method. Then well-structured zeolitic imidazolate framework (ZIF-67) nanocubes were grown in situ on the as-prepared NiCo2O4 nanowires to form a hybrid nanoarchitecture. The hierarchical structure was transformed into a Co3O4/NiCo2O4/CC composite after annealing in the air. The as-prepared electrode was put into 0.1 M NaOH, and cyclic voltammetry and amperometry were employed to investigate its electrocatalytic properties at room temperature. It was found that the Co3O4/NiCo2O4/CC electrode exhibited outstanding sensing properties towards glucose, including terrific sensitivity (12.835 mA mM-1 cm-2), a wide linear range (from 1 µM to 1.127 mM), a low detection limit (0.64 µM) and a fast response time (within 2 s). In addition, it also had excellent selectivity, reproducibility and stability. The improvement in enzyme-free glucose sensing, in addition to the high porosity and large specific surface area of metal organic framework-derived Co3O4 hollow nanocubes, can be attributed to the NiCo2O4 nanowire arrays affording fast channels for electron transfer between CC and Co3O4. Accordingly, this method, which directly prepares hierarchical composite nanomaterials on a conductive substrate, may open up a new perspective for the enhancement of non-enzymatic glucose-sensing properties.

Facile synthesis of CuCo2O4@NiCo2O4 hybrid nanowire arrays on carbon cloth for a multicomponent non-enzymatic glucose sensor.

The design of hierarchical heterogeneous structures with rational components is considered as a promising method to enhance the properties of electrocatalyst. Binary metal oxides, with high electrochemical activity, have attracted considerable interest in glucose determination. In this work, we synthesized the CuCo2O4@NiCo2O4 hybrid structure on conductive carbon cloth (CC) via a simple two-step hydrothermal process and investigated its catalytic ability toward glucose. The two individual components that make up this hybrid electrode have good electrical conductivity and excellent catalytic properties for glucose, so the smart combination of these two active materials can provide more catalytic sites and sufficient redox couples for the glucose oxidation. As a result, the CuCo2O4@NiCo2O4 modified CC presented superior glucose sensing properties, including ultrahigh sensitivity, fast response time, wide linear range and acceptable detection limit. Besides, the sample also exhibited good selectivity for substances in human blood that interfere with glucose detection, such as UA, AA, fructose, sucrose and KCl. The potential of the CuCo2O4@NiCo2O4/CC electrode for practical application was investigated by measuring the glucose concentration in real serum samples. These results prove that the construction of hierarchical ordered structure is conducive to the improvement of glucose sensor.

Mechanistic Study of 1,4-Benzodiazepine-2,5-diones from Diphenylamine and Diethyl 2-Phenylmalonate by Density Functional Theory.

The mechanisms for the reaction between diphenylamine and diethyl 2-phenylmalonate were investigated using M06-2X-D3/6-31+G(d,p) method and level, and the SMD model was applied to simulate the solvent effect. The computational results suggested that diphenylamine and diethyl 2-phenylmalonate can convert into 4-hydroxy-1,3-diphenylquinolin-2(1H)-one via a series of reactions (addition reaction, dealcoholization reaction, enolization reaction, dealcoholization reaction, ring-closure reaction, and H-shift reaction). And H2O, as the catalyst, can play an important role to promote these reactions. In the following reaction, there are two paths to yield the second product 3-chloro-1,3-diphenylquinoline-2,4(1H,3H)-dione and the computational results indicated that the first path (blue line) with the rate-determining step of 24.9 kcal/mol is favorable. With the participation of methanamine, a SN2 reaction happened and the third product 3-(methylamino)-1,3-diphenylquinoline-2,4(1H,3H)-dione had been yielded in the effect of methanamine or Cl anion. The analysis of Gibbs free energy surfaces shows that methanamine is better than Cl anion to extract the proton via an exothermic reaction. Finally, the third product 3-(methylamino)-1,3-diphenylquinoline-2,4(1H,3H)-dione would go through a ring-enlargement reaction, promoted by base (TMG or Triton B), to yield the final product. The computational results demonstrated that this reaction can release much energy with Triton B than that with TMG. And the energy of the highest point is 10.1 kcal/mol (16.8 kcal/mol), which can readily occur at the room temperature. The results could provide valuable insights into these types of interactions and related ones.

Mechanism of ammonium sharp increase during sediments odor control by calcium nitrate addition and an alternative control approach by subsurface injection.

Nitrate-driven sulfide/ferrous oxidation has been proved a cost-effective approach for river sediments in-situ odor control. However, calcium nitrate addition would sharply increase ammonium concentration in interstitial water and the mechanism was not yet clear. In this work, though sulfide and ferrous iron were efficiently oxidized, about 102% of NH4+ concentration increased in interstitial water on the first day of calcium nitrate injection (30 mg kg dwt-1), and about 31% more NH4+ increase at the 21st days was observed. To discover the mechanism of ammonium sharp release, desorption kinetics experiment was conducted and the results suggested that the short-time sharp releases of ammonium when calcium nitrate was added could be attributed to the chemical extraction of exchangeable ammonium by calcium ion. Furthermore, at the end of treatment, many genus such as Thiobacillus, Sulfurimonas, Thermomonas, and Clostridium, which were closely related to sulfide and ferrous-driven denitrification and dissimilatory nitrate reduction to ammonium (DNRA), were identified by 16S rRNA Illumina sequencing method. These findings indicated the long-time increase of ammonium might be determined by the biochemical processes (e.g. DNRA) driven by nitrate reduction. Therefore, to avoid the impact of ammonium release, an alternative subsurface injection method was introduced in this work, and the results showed that ammonium releases could be well controlled when the injection position was beneath 10 cm of the sediment surface.

Description of Sphingomonas mesophila sp. nov., isolated from Gastrodia elata Blume.

A Gram-staining-negative, strictly aerobic, non-motile strain, SYSUP0001T, was isolated from tubers of Gastrodia elata Blume. The 16S rRNA gene sequence result indicated that SYSUP0001T represents a member of the genus Sphingomonas, with the highest sequence similarity (97.7 %) to the type strain of Sphingomonasginsengisoli. SYSUP0001T grew at 14-37 °C and pH 6-8, with optimum growth at 28 °C and pH 7. Tolerance to NaCl was up to 3 % (w/v) with optimum growth in the absence of NaCl. The respiratory quinone was Q-10. The major fatty acids were C18 : 1ω7c, Summed feature 3 (C16 : 1ω7c/C16 : 1ω6c), and C16 : 0. The polar lipids were diphosphatidylglycerol (DPG), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), sphingoglycolipid (SGL), phosphatidylcholine (PC) and four unidentified polar lipids (L). The DNA G+C content was 67.5 %. The average nucleotide identity (ANI) values between SYSUP0001T and closely related members of the genus Sphingomonas were below the cut-off level (95-96 %) for species delineation. On the basis of the phenotypic, phylogenetic and chemotaxonomic characterizations, SYSUP0001T represents a novel species of the genus Sphingomonas, for which the name Sphingomonasmesophila sp. nov. is proposed. The type strain is SYSUP0001T (=KCTC 62179 T=CGMCC 1.16462T).

Description of Paracoccus endophyticus sp. nov., isolated from Gastrodia elata Blume.

A Gram-stain-negative, strictly aerobic, non-motile strain, SYSUP0003T, was isolated from tubers of Gastrodia elata Blume. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain SYSUP0003T belonged to the genus Paracoccus, with the highest sequence similarity to the type strain of Paracoccus sediminis (97.5 %). Strain SYSUP0003T grew at pH 6.0-8.0 and 4-30 °C with optimum growth at pH 7.0 and 28 °C. Strain SYSUP0003T could tolerate up to 1 % (w/v) NaCl and grew optimally in the absence of NaCl. The isoprenoid quinone of strain SYSUP0003T was Q-10. The major fatty acids were C18 : 0, C16 : 0, C10 : 0 3-OH and summed feature 7. The polar lipids were diphosphatidylglycerol (DPG), aminophospholipids (AL), phosphatidylglycerol (PG), phosphatidylcholine (PC) and four unidentified polar lipids (L). The genome size was 3 204 685 bp, with a DNA G+C content of 69.7 mol%. The average nucleotide identity values between strain SYSUP0003T and P. sediminis DSM 26170T (ANIm 84.2 %, ANIb 75.6 %), Paracoccus solventivorans DSM 6637T (ANIm 84.5 %, ANIb 76.9 %) and Paracoccus alkenifer DSM 11593T (ANIm 84.3 %, ANIb 77.3 %) were below the cut-off level (95-96 %) for species delineation. Based on phenotypic, chemotaxonomic and molecular characterizations, strain SYSUP0003T represents a novel species of the genus Paracoccus, for which the name Paracoccus endophyticus sp. nov. is proposed. The type strain is SYSUP0003T (=KCTC 62180T=CGMCC 1.16545T).

A Review of Electrode for Rechargeable Magnesium Ion Batteries.

Rechargeable magnesium ion batteries with their intrinsic advantages, such as high capacity, low reduction potential and low cost, have been a major candidate for next generation batteries beyond lithium ion batteries. Although some researches have been done in this area, it is still at its early stage hindered by sluggish kinetics and development of electrodes. This review is aimed at exhibiting the key advancement of the cathodes and anodes. Currently used cathodes, Chevel phase, V2O5, MnO2 and MoS2 are detailed introduced. Currently used anodes have also been summarized, in particular, we highlight Mg-ion insertion-type anode materials (e.g., Bi, Sn) of MIB, which provides a new way of thinking. Furthermore, the mechanism for Mg insertion/deinsertion and several methods to improve the electrochemical properties for these electrode materials, mainly including reducing the particle size and changing the morphology, have been showed.

Nesterenkonia endophytica sp. nov., isolated from roots of Glycyrrhiza uralensis.

A Gram-positive and non-motile actinobacterium, designated strain EGI 60016T, was isolated from healthy roots of Glycyrrhiza uralensis F. collected from Xinyuan County, Xinjiang Province, China. The 16S rRNA gene sequence of strain EGI 60016T was found to show 97.5 and 97.3 % sequence similarities to Nesterenkonia rhizosphaerae EGI 80099T and Nesternkonia massiliensis NP1T, respectively. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain EGI 60016T formed a distinct clade with N. rhizosphaerae EGI 80099T and N. massiliensis NP1T. The polar lipids detected for strain EGI 60016T were diphosphatidylglycerol, phosphatidylcholine, phosphatidylglycerol, phosphatidylinositol, an unidentified glycolipid, an unidentified lipid and an unidentified phospholipid. The DNA G+C content was determined to be 64.1 mol%. Other chemotaxonomic features of strain EGI 60016T included MK-7, MK-8 and MK-9 as the respiratory quinones, and anteiso-C15 : 0 and anteiso-C17 : 0 as the major fatty acids. Based on the results of the phylogenetic analysis supported by morphological, physiological, chemotaxonomic and other differentiating phenotypic characteristics, strain EGI 60016T is considered to represent a novel species of the genus Nesterenkonia, for which the name Nesterenkonia endophytica sp. nov. is proposed. The type strain is EGI 60016T (=CCTCC AB 2017176T=NBRC 112398T).

Ochrobactrum endophyticum sp. nov., isolated from roots of Glycyrrhiza uralensis.

A novel Gram-staining negative, motile, rod-shaped and aerobic bacterial strain, designated EGI 60010(T), was isolated from healthy roots of Glycyrrhiza uralensis F. collected from Yili County, Xinjiang Province, North-West China. The 16S rRNA gene sequence of strain EGI 60010(T) showed 97.2 % sequence similarities with Ochrobactrum anthropi ATCC 49188(T) and Ochrobactrum cytisi ESC1(T), and 97.1 % with Ochrobactrum lupini LUP21(T). The phylogenetic analysis based on 16S rRNA gene sequences showed that the new isolate clustered with members of the genera Ochrobactrum, and formed a distinct clade in the neighbour-joining tree. Q-10 was identified as the respiratory quinone for strain EGI 60010(T). The major fatty acids were summed feature 8 (C18:1 ω6c and/or C18:1 ω7c), C19:0 cyclo ω8c, summed feature 4 (C17:1 iso I/anteiso B) and C16:0. The polar lipids detected were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol and phosphatidylcholine. The DNA G+C content of strain EGI 60010(T) was determined to be 60.4 mol%. The genomic DNA relatedness values determined between strain EGI 60010(T) and the closely related strains O. anthropi JCM 21032(T), O. cytisi CCTCC AB2014258(T) and O. lupini NBRC 102587(T) were 50.3, 50.0 and 41.6 %, respectively. Based on the results of the molecular studies supported by its differentiating phenotypic characteristics, strain EGI 60010(T) was considered to represent a novel species within the genus Ochrobactrum, for which the name Ochrobactrum endophyticum sp. nov., is proposed. The type strain is EGI 60010(T) (=CGMCC 1.15082(T) = KCTC 42485(T) = DSM 29930(T)).