Detalhe da pesquisa
1.
Detection of Mpox Virus Using Microbial Cell-Free DNA: The Potential of Pathogen-Agnostic Sequencing for Rapid Identification of Emerging Pathogens.
J Infect Dis
; 229(Supplement_2): S144-S155, 2024 Mar 26.
Artigo
Inglês
| MEDLINE | ID: mdl-37824825
2.
Plasma Microbial Cell-Free DNA Sequencing from over 15,000 Patients Identified a Broad Spectrum of Pathogens.
J Clin Microbiol
; 61(8): e0185522, 2023 08 23.
Artigo
Inglês
| MEDLINE | ID: mdl-37439686
3.
LiveKraken--real-time metagenomic classification of illumina data.
Bioinformatics
; 34(21): 3750-3752, 2018 11 01.
Artigo
Inglês
| MEDLINE | ID: mdl-29868852
4.
HiLive: real-time mapping of illumina reads while sequencing.
Bioinformatics
; 33(6): 917-319, 2017 03 15.
Artigo
Inglês
| MEDLINE | ID: mdl-27794555
5.
DUDes: a top-down taxonomic profiler for metagenomics.
Bioinformatics
; 32(15): 2272-80, 2016 08 01.
Artigo
Inglês
| MEDLINE | ID: mdl-27153591
6.
GIIRA--RNA-Seq driven gene finding incorporating ambiguous reads.
Bioinformatics
; 30(5): 606-13, 2014 Mar 01.
Artigo
Inglês
| MEDLINE | ID: mdl-24123675
7.
Pipasic: similarity and expression correction for strain-level identification and quantification in metaproteomics.
Bioinformatics
; 30(12): i149-56, 2014 Jun 15.
Artigo
Inglês
| MEDLINE | ID: mdl-24931978
8.
Metagenomic abundance estimation and diagnostic testing on species level.
Nucleic Acids Res
; 41(1): e10, 2013 Jan 07.
Artigo
Inglês
| MEDLINE | ID: mdl-22941661
9.
Analyzing genome coverage profiles with applications to quality control in metagenomics.
Bioinformatics
; 29(10): 1260-7, 2013 May 15.
Artigo
Inglês
| MEDLINE | ID: mdl-23589648
10.
SIMA: simultaneous multiple alignment of LC/MS peak lists.
Bioinformatics
; 27(7): 987-93, 2011 Apr 01.
Artigo
Inglês
| MEDLINE | ID: mdl-21296750
11.
PathoLive-Real-Time Pathogen Identification from Metagenomic Illumina Datasets.
Life (Basel)
; 12(9)2022 Aug 30.
Artigo
Inglês
| MEDLINE | ID: mdl-36143382
12.
Rapid, Noninvasive Diagnosis of Balamuthia mandrillaris Encephalitis by a Plasma-Based Next-Generation Sequencing Test.
Open Forum Infect Dis
; 7(7): ofaa189, 2020 Jul.
Artigo
Inglês
| MEDLINE | ID: mdl-32715017
13.
Next-generation sequencing of microbial cell-free DNA for rapid noninvasive diagnosis of infectious diseases in immunocompromised hosts.
F1000Res
; 8: 1194, 2019.
Artigo
Inglês
| MEDLINE | ID: mdl-31814964
14.
Analytical and clinical validation of a microbial cell-free DNA sequencing test for infectious disease.
Nat Microbiol
; 4(4): 663-674, 2019 04.
Artigo
Inglês
| MEDLINE | ID: mdl-30742071
15.
Metagenomic profiling of known and unknown microbes with microbeGPS.
PLoS One
; 10(2): e0117711, 2015.
Artigo
Inglês
| MEDLINE | ID: mdl-25643362