Detalhe da pesquisa
1.
Multisensory Logic of Infant-Directed Aggression by Males.
Cell
; 175(7): 1827-1841.e17, 2018 12 13.
Artigo
Inglês
| MEDLINE | ID: mdl-30550786
2.
The tidyomics ecosystem: enhancing omic data analyses.
Nat Methods
; 2024 Jun 14.
Artigo
Inglês
| MEDLINE | ID: mdl-38877315
3.
Chromatin loop dynamics during cellular differentiation are associated with changes to both anchor and internal regulatory features.
Genome Res
; 33(8): 1258-1268, 2023 08.
Artigo
Inglês
| MEDLINE | ID: mdl-37699658
4.
Context-aware transcript quantification from long-read RNA-seq data with Bambu.
Nat Methods
; 20(8): 1187-1195, 2023 08.
Artigo
Inglês
| MEDLINE | ID: mdl-37308696
5.
Canonical correlation analysis for multi-omics: Application to cross-cohort analysis.
PLoS Genet
; 19(5): e1010517, 2023 05.
Artigo
Inglês
| MEDLINE | ID: mdl-37216410
6.
Inference of putative cell-type-specific imprinted regulatory elements and genes during human neuronal differentiation.
Hum Mol Genet
; 32(3): 402-416, 2023 01 13.
Artigo
Inglês
| MEDLINE | ID: mdl-35994039
7.
Comprehensive evaluation of methods for differential expression analysis of metatranscriptomics data.
Brief Bioinform
; 24(5)2023 09 20.
Artigo
Inglês
| MEDLINE | ID: mdl-37738402
8.
Static and Dynamic DNA Loops form AP-1-Bound Activation Hubs during Macrophage Development.
Mol Cell
; 67(6): 1037-1048.e6, 2017 Sep 21.
Artigo
Inglês
| MEDLINE | ID: mdl-28890333
9.
Brain-trait-associated variants impact cell-type-specific gene regulation during neurogenesis.
Am J Hum Genet
; 108(9): 1647-1668, 2021 09 02.
Artigo
Inglês
| MEDLINE | ID: mdl-34416157
10.
ACTOR: a latent Dirichlet model to compare expressed isoform proportions to a reference panel.
Biostatistics
; 24(2): 388-405, 2023 04 14.
Artigo
Inglês
| MEDLINE | ID: mdl-33948626
11.
bootRanges: flexible generation of null sets of genomic ranges for hypothesis testing.
Bioinformatics
; 39(5)2023 05 04.
Artigo
Inglês
| MEDLINE | ID: mdl-37042725
12.
matchRanges: generating null hypothesis genomic ranges via covariate-matched sampling.
Bioinformatics
; 39(5)2023 05 04.
Artigo
Inglês
| MEDLINE | ID: mdl-37084270
13.
excluderanges: exclusion sets for T2T-CHM13, GRCm39, and other genome assemblies.
Bioinformatics
; 39(4)2023 04 03.
Artigo
Inglês
| MEDLINE | ID: mdl-37067481
14.
MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies.
PLoS Genet
; 17(3): e1009398, 2021 03.
Artigo
Inglês
| MEDLINE | ID: mdl-33684137
15.
Chromatin accessibility and gene expression during adipocyte differentiation identify context-dependent effects at cardiometabolic GWAS loci.
PLoS Genet
; 17(10): e1009865, 2021 10.
Artigo
Inglês
| MEDLINE | ID: mdl-34699533
16.
MRLocus: Identifying causal genes mediating a trait through Bayesian estimation of allelic heterogeneity.
PLoS Genet
; 17(4): e1009455, 2021 04.
Artigo
Inglês
| MEDLINE | ID: mdl-33872308
17.
An approach for normalization and quality control for NanoString RNA expression data.
Brief Bioinform
; 22(3)2021 05 20.
Artigo
Inglês
| MEDLINE | ID: mdl-32789507
18.
Airpart: interpretable statistical models for analyzing allelic imbalance in single-cell datasets.
Bioinformatics
; 38(10): 2773-2780, 2022 05 13.
Artigo
Inglês
| MEDLINE | ID: mdl-35561168
19.
Plotgardener: cultivating precise multi-panel figures in R.
Bioinformatics
; 38(7): 2042-2045, 2022 03 28.
Artigo
Inglês
| MEDLINE | ID: mdl-35134826
20.
DeCompress: tissue compartment deconvolution of targeted mRNA expression panels using compressed sensing.
Nucleic Acids Res
; 49(8): e48, 2021 05 07.
Artigo
Inglês
| MEDLINE | ID: mdl-33524140