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1.
Plant Dis ; 2022 Apr 05.
Artigo em Inglês | MEDLINE | ID: mdl-35380466

RESUMO

In Korea, most of the grafted watermelons are a fusion of bottle gourd (Lagenaria siceraria) as a rootstock and watermelon (Citrullus lanatus) as a scionstock (Lee et al., 2010). Currently, we have collected several samples from grafted watermelon displaying symptoms of yellowing, withered and wilting leaves. When the symptomatic stem was excised, browning vascular tissues were observed due to the colonization of fungal pathogen. From the samples obtained, 25 fungal isolates were identified as species of Fusarium. Among 25 isolates, 18 were identified as Fusarium oxysporum, four as Fusarium solani, and three as Fusarium equiseti (F. equiseti) . Initial assessment showed that one of the F. equiseti isolates (NIHHS 16-126) was highly virulent to rootstock. Interestingly, this is the first time F. equiseti has been identified pathogenic to grafted watermelon. NIHHS 16-126 isolate was collected from watermelon cultivation field around Buyeo-gun (36.25951°N, 126.92044°E) county. Disease incident was estimated to infect approximately 10% of the watermelon plants cultivated in this area. NIHHS 16-126 isolate was examined to confirm its identity. On potato dextrose agar, colonies appeared yellowish-brown while the aerial mycelium was whitish to peach in color. Macroconidia were relatively long (20.21 - 51.13 × 2.30 - 4.5 µm, n=50), comprise of 3-6 septa, curvature shape and its conidiophores were with monophialides. However, microconidia formation was not observed. These morphological characteristics resemble F. equiseti characters as described by Hyun (2019). For molecular identification, an internal transcribed spacer of ribosomal DNA (ITS-rDNA), elongation factor-1α (EF-1α), and beta-tubulin (ß-tub) genes were sequenced using primer pairs of ITS1/ITS4 (White et al., 1990), EF1-728F/EF1-986R (Glass and Donaldson 1995), and Bt2a/Bt2b (Carbone and Kohn 1999). BLASTN analysis revealed that ITS-rDNA (LC648248), EF-1α (LC648250), and ß-tub (LC648249) sequences were 99-100% identical to F. equiseti reference sequences (KF515650, KF747331, and KF747330) infected Avicennia marina in China (Lu 2014). Phylogenetic analysis of concatenated ITS-rDNA, EF-1α and ß-tub sequences showed that this isolate clustered in the same clade as F. equiseti, confirming its identity as F. equiseti. For the inoculation, roots of 12-days-old seedlings (watermelon and bottle gourd, n=10 each) were dipped in the conidia suspension (1x106 conidia/µL) for 30 min. Inoculated seedlings were planted in the soil before being transferred to the greenhouse (temperature; 30°C, daylight; 14 hours). Control plants were inoculated with sterile water. Results showed that after 21 days post-inoculation, all inoculated bottle gourd seedlings (n=10) wilted and eventually died. In contrast, none of the inoculated watermelons or control seedlings were affected. Re-isolation of three fungal isolates (infected root) showed that their morphology and gene markers sequence were identical to the original isolates thus fulfilled Koch's postulates. Bottle gourd is the most preferred rootstock for grafted watermelons among Korean farmers due to its ability to resist Fusarium spp. infection. Therefore, the identification of F. equiseti as a fungal that is pathogenic to rootstock is crucial information to manage fusarium wilt disease among grafted watermelon. To our knowledge, this is the first report confirming F. equiseti infection in grafted watermelon plants in Korea.

2.
Mol Pharm ; 18(8): 2889-2905, 2021 08 02.
Artigo em Inglês | MEDLINE | ID: mdl-34260250

RESUMO

Even though nanoparticle drug delivery systems (nanoDDSs) have improved antitumor efficacy by delivering more drugs to tumor sites compared to free and unencapsulated therapeutics, achieving satisfactory distribution and penetration of nanoDDSs inside solid tumors, especially in stromal fibrous tumors, remains challenging. As one of the most common stromal cells in solid tumors, tumor-associated fibroblasts (TAFs) not only promote tumor growth and metastasis but also reduce the drug delivery efficiency of nanoparticles through the tumor's inherent physical and physiological barriers. Thus, TAFs have been emerging as attractive targets, and TAF-targeting nanotherapeutics have been extensively explored to enhance the tumor delivery efficiency and efficacy of various anticancer agents. The purpose of this Review is to opportunely summarize the underlying mechanisms of TAFs on obstructing nanoparticle-mediated drug delivery into tumors and discuss the current advances of a plethora of nanotherapeutic approaches for effectively targeting TAFs.


Assuntos
Antineoplásicos/administração & dosagem , Fibroblastos Associados a Câncer/efeitos dos fármacos , Sistemas de Liberação de Medicamentos/métodos , Nanopartículas/química , Neoplasias/tratamento farmacológico , Animais , Humanos , Microambiente Tumoral/efeitos dos fármacos
3.
Plant Dis ; 2021 Aug 25.
Artigo em Inglês | MEDLINE | ID: mdl-34433312

RESUMO

Botryosphaeria dothidea (B. dothidea) is a fungal pathogen commonly associated with stem canker, dieback, and rot disease in a variety of woody plants worldwide (Dong and Guo, 2020). In Korea, B. dothidea was reported to cause a disease problem to serval crops such as apple and blueberry (Kim, 1995; Choi, 2011). In early 2020, a typical symptom resembling the stem rot disease was spotted to occur at a plumcot cultivation area around Wanju (35.827870, 127.030380) province, Korea. At the early stage of infection, a small blister appeared on the plumcot branch and stem. However, as the blister extended, a light brown canker was observed appeared on the infected area and in some cases a sticky sap oozed from the branch bark crack. If not managed or treated properly, all leaves beyond the infection site will turn brown, wilt, and the whole plumcot tree eventually dies. A survey in the affected area showed that approximately 5% of the plumcot trees were infected which cause up to 10% reduction in total production. To identify the causal agent, symptomatic tissues were excised and surface sterilized with 70% ethanol for 30 sec followed by 1% NaClO for 30 sec before rinsing with sterile water, thrice. The samples were then dried with a piece of filter paper and later air-dried before being placed on a potato dextrose agar (PDA). The PDA plates were then incubated at 25°C for 5 days with 12 hours light/dark cycles period. Among several fungal isolates obtained, four were selected for further analyses. Morphological identification revealed that the fungal conidia were hyaline, ovoid, fusiform (type that rarely form a septum) and unicellular with an average size of 18 - 20 µm × 4.5 -5.5 µm (n = 50). These morphological characters have a strong resemblance to B. dothidea that described by Slipper et al., (2004). For molecular identification, Internal transcribed spacer (ITS), beta-tubulin (ß-tubulin) and elongation factor 1 alpha (EF-1α) were amplified and sequenced using universal primer pairs ITS1/ITS4 (White et al., 1990), Bt2a/Bt2b (Glass and Donaldson, 1995) and EF1/EF2 (O'Donnell et al. 1998) respectively. Alignment analysis showed that ITS (LC602817), ß-tubulin (LC602820) and EF-1α (LC602821) sequences were 99-100% identical to the orthologous genes identified in B. dothidea infecting soybean in China [MW130133 (identity 537/536 bp), MW147482 (identity 394/394 bp) and MW147481 (identify 250/250 bp) respectively] (Chen et al. 2021). However, phylogenetic analysis of concatenated ITS, ß-tubulin and EF-1α genes sequence established the identity of these isolate as B. dothidea. Due to the 100% identical at the molecular level, isolate NIHHS 20-262 was selected as a representative for further analysis. For the pathogenicity test, fungal mycelium (via PDA plug) was used as a source of inoculum for both intact and detached plumcot stems trials. For the intact trial, mycelium was inoculated on the wounded spots of ten plumcot stems that grew at the NIHHS trial farm. Ten days post-inoculation (dpi), disease symptoms i.e. stem colour turn from greenish to dark brown was observed at the inoculated sites. For the detached trial, mycelium was inoculated on the wounded spots of ten detached plumcot stems. The inoculated stems were kept in a closed container to maintain 90% humidity before incubated at 25ºC in the dark. Interestingly, on the detached stems, disease symptoms (greenish colour turn to dark brown) were observed to appear seven days early compare to intact stems. A sterile PDA plug replacing fungal mycelium served as a negative control and the result shows no symptoms were observed on either intact or detached control stems. For consistency purposes, pathogenicity tests on intact stems were performed on three different plumcot trees, whereas three biological replicates for detached stems. Isolation and re-identification of two colonies from the infected sites (intact and detached stems) were attempted and the results obtained were identical to the original isolate, thus fulfilling Koch's postulates. Local farmers described this disease as a "certain death disease" in plumcot. Therefore, accurate identification of B. dothidea as the causal agent is critical for effective disease management to minimise qualitative and quantitative losses in the plumcot industry. Although has been reported to cause dieback disease in blueberry in Korea (Choi, 2011), to our knowledge, this is the first study to report B. dothidea causing stem rot diseases on the plumcot trees in Korea.

4.
Plant Dis ; 2020 Sep 29.
Artigo em Inglês | MEDLINE | ID: mdl-32990518

RESUMO

Plumcot is an interspecific hybrid product between Japanese plums (Prunus salicina) and apricots (Prunus armeniaca) obtained by the NIHHS, Korea in 1999 [1]. At the early of 2017, black spots-like symptoms were observed on plumcot fruits and leaves at cultivation areas in Naju (34.965595, 126.665853) province. Further investigation shows that approximately 60% of the plumcot leaves in the affected orchard were infected, which caused 40% total production loss. At the early stage of infection, disease symptoms appear as small, angular and water-soaked spots and develop into circular brown spots at the later stages of infection. As the disease progresses, the leaf tissues around the spots became yellow and the lesions enlarged. When the adjacent lesions merged and the necrotic tissues fall off, shot-hole symptoms appear on the leaves. To identify the causal agent of this disease, infected leaf tissues were excised and surface-sterilized with 1% NaOCl for 30 secs prior to rinsing with sterile water, thrice . Tissue samples were then placed in sterile water (0.5 mL) for 5 min before its aliquots were streaked onto Luria-Bertani (LB) agar. Plates then were incubated at 28°C. To obtain pure colonies, bacteria were re-streak into a new LB agar and colonies showing typical Xanthomonas spp. morphology (i.e. convex, smooth, yellow, and mucoid) were subjected to Gram staining assay. For molecular identification, 16S ribosomal DNA (16S-rDNA) and gyrase B (gyrB) genes were amplified using a 9F/1512r and UP-1/UP-2Sr primers [2,3] respectively from 5 gram-negative isolates. PCR products were sequenced and analysed using BLASTN. Result shows that 16S-rDNA and gyrB genes are 99-100% identical to a similar genomic region of Xanthomonas arboricola pv. pruni (Xap) isolated in almond (MK156163), peach (MG049922) and apricot (KX950802) respectively [4,5,6]. 16S-rDNA and gyrB gene sequences were deposited in the GenBank (LC485472 and LC576824), whereas pathogen isolate was deposited into Korean Agricultural Culture Collection (KACC19949). Pathogenicity test was performed using Xap bacterial suspension (108 cfu/mL) inoculated on the abaxial and adaxial surface of plumcot detached leaves. For inoculation, 10 healthy young leaves were used whereas, 5 young leaves mock-inoculated with sterile LB broth were used as a control. Both leaf samples were kept in a closed container to maintain 100% humidity before being incubated at 25°C. The water-soaked symptoms were observed visually on the inoculated leaves 2 to 3 days post-inoculation. No water-soaked symptoms were observed on the control leaves. Morphology and sequences of molecular markers used showed that the 3 bacterial colonies re-isolated from the inoculated leaves were identical to the original isolate, fulfilling Koch's postulate. Pathogenicity tests were repeated twice and the results obtained were consistent with the first experiment. As a new variety of stone fruit cultivated in Korea, information about pathogens and registered agrochemicals to control disease outbreak in plumcot are still limited. Therefore, the identification of Xap as a causal agent to the black spot disease is critical for the development of disease management strategies and to identify appropriate agrochemicals to control the occurrence of this disease in the field. To our knowledge, this is the first report of Xap as a causal agent to the shot-hole disease on the plumcot in Korea.

5.
Plant Dis ; 2020 Sep 23.
Artigo em Inglês | MEDLINE | ID: mdl-32967561

RESUMO

Chinese cabbage (Brassica rapa L.) is one of the most important vegetables in Korea due to its role as the main ingredient for the making of Kimchi. In June 2014, disease symptoms of leaves wilt, dry, and drop off on Chinese cabbage were observed in a Chinese cabbage farm located at Taebeak (37°26'50.7"N 128°95'50.0"E), Gangwon province, Korea. This disease was observed on approximately 35% of the plants in the field, causing an almost 10% decrease in total production. At the early stage of infection, the color at the edge of the plant foliage changed from green to yellow. As the disease progressed, infected leaves wilted, dried off, and detached from the plant. Soft rot that occurred at the base of the leaf stem and root tissues caused the infected leaves to dry and fell off the plant. To identify the causal agent, a small piece of infected leaf tissues was sterilized with 1% sodium hypochlorite solution for 1 min and rinsed with sterile water before it was transferred onto potato dextrose agar (PDA) media. The plates were then incubated at 25°C for 10 days in the dark. Fungal colonies grown on PDA media were of white-creamy in color with an abundance of mycelia and later develop into black color due to the formation of microsclerotia embedded in the media. Microscopic examination showed conidiophores and phialides were both appeared in a verticillate arrangement, whereas conidia were hyaline, smooth-walled, and ellipsoidal to oval with average size 5.4×2.5 µm (n=100). Microsclerotia appeared in elongate to an irregularly spherical shape and greatly variable in size. The morphological attributes of the fungal isolate described above were comparable to the characteristics of Verticillium dahliae Kleb. (V. dahliae) described by Hawksworth and Talboys (1970), and V. dahliae isolated from Chinese cabbage in Japan reported in Kishi (1998). Pathogenicity test was performed by soaking twelve individual Chinese cabbage seedlings for 15 min into fungal pathogen conidial suspension (1x106 conidium/ml) before transferred into soil tray. The same number of non-inoculated seedlings on the soil tray was used as a control. Inoculated and control plants were then covered with a plastic bag for 24 hours to maintain high humidity before transferred into the greenhouse (25°C). Seven days post-inoculation (dpi), treated plant leaves turned yellow, and soft rot was observed. At 10-dpi, plant leaf tissues dried off and severe soft rot occurred. Pathogenicity test was repeated three times and consistent results were obtained. The re-isolated fungal pathogen from the inoculated plants showed identical morphological characteristics to the original isolates, thus fulfilling Koch's postulates. For further identification, PCR amplification targeting Internal Transcribed Spacer (ITS) and RNA polymerase II gene (RPB2) regions were performed (Liu et al., 1999; White et al., 1990). Each PCR product was sequenced and deposited in the GenBank under the accession LC549667 and LC061275, respectively. Sequence analysis using BLAST showed that the nucleotide sequences of ITS and RPB2 DNA fragments are 99-100% identical to the reference strain of V. dahliae available in the NCBI database (MG585719, HE972023, XM_009652520 and DQ522468, respectively). Therefore, based on the results of morphological and molecular analyses, the fungal pathogen isolated from Chinese cabbage in this study was identified as V. dahliae and deposited in the National Institute of Horticultural and Herbal Science germplasm collection (NIHHS 13-252). Recently, due to high demand and a more competitive price, more Chrysanthemum farmers in Korea switch their crops to Chinese cabbage. Interestingly, the occurrence of V. dahliae infection was also reported to occur in Chrysanthemum plants in Korea (Han et al. 2007), which indicates a serious problem ahead to these farmers. Therefore, in this current study, the identification of V. dahliae pathogenic to Chinese cabbage will provide vital knowledge for the development of disease management strategies to minimize the loss of crop production. To our knowledge, this is the first report that V. dahliae causes Verticillium wilt disease on Chinese cabbage in Korea.

7.
J Basic Microbiol ; 56(1): 92-101, 2016 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-26367263

RESUMO

This study analyzed the rhizobacterial distribution from two coasts, which show contrasting climates and geographical and geological characteristics, to secure specific microbial resources. Furthermore, rhizobacteria were characterized and the results were comparatively analyzed with reference to the characteristics of two coastal environments. For this purpose, three representative halophyte species communities native to the Dokdo Islands and the East Sea coast of Korea were selected. Partial identification of rhizobacteria showed a clear difference between each sampling site and halophyte. Furthermore, isolates were characterized by their growth properties under NaCl or pH gradients related with previous geographical, geological, and climatic studies of the Dokdo Islands and the East Sea coast. A high proportion of the East Sea isolates showed halotolerance, but a high proportion of Dokdo isolates shared halophilic traits. Meanwhile, a higher proportion of East Sea isolates grew at a wider range of pH values than those of the Dokdo Islands. The results of our study suggest that unique rhizobacterial resources developed under specific rhizospheric conditions derived from halophytes interacting with their specific environment, even within the same coastal halophytic species. Therefore, this study proposes the necessity of securing characterized and unique microbial resources to apply to specific environments for the purpose of recovering and restoring sand dunes or salt-damaged agricultural lands.


Assuntos
Rhizobium/classificação , Rhizobium/isolamento & purificação , Plantas Tolerantes a Sal/microbiologia , Microbiologia do Solo , Sequência de Bases , Biodiversidade , Clima , DNA Bacteriano/genética , DNA Ribossômico/genética , Fenótipo , Filogenia , Raízes de Plantas/microbiologia , RNA Ribossômico 16S/genética , República da Coreia , Rhizobium/genética , Rizosfera , Salinidade , Plantas Tolerantes a Sal/química , Plantas Tolerantes a Sal/crescimento & desenvolvimento , Análise de Sequência de DNA , Cloreto de Sódio/química , Cloreto de Sódio/metabolismo , Solo/química
8.
Nat Commun ; 15(1): 2073, 2024 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-38453918

RESUMO

Cholesterol (Chol) fortifies packing and reduces fluidity and permeability of the lipid bilayer in vesicles (liposomes)-mediated drug delivery. However, under the physiological environment, Chol is rapidly extracted from the lipid bilayer by biomembranes, which jeopardizes membrane stability and results in premature leakage for delivered payloads, yielding suboptimal clinic efficacy. Herein, we report a Chol-modified sphingomyelin (SM) lipid bilayer via covalently conjugating Chol to SM (SM-Chol), which retains membrane condensing ability of Chol. Systemic structure activity relationship screening demonstrates that SM-Chol with a disulfide bond and longer linker outperforms other counterparts and conventional phospholipids/Chol mixture systems on blocking Chol transfer and payload leakage, increases maximum tolerated dose of vincristine while reducing systemic toxicities, improves pharmacokinetics and tumor delivery efficiency, and enhances antitumor efficacy in SU-DHL-4 diffuse large B-cell lymphoma xenograft model in female mice. Furthermore, SM-Chol improves therapeutic delivery of structurally diversified therapeutic agents (irinotecan, doxorubicin, dexamethasone) or siRNA targeting multi-drug resistant gene (p-glycoprotein) in late-stage metastatic orthotopic KPC-Luc pancreas cancer, 4T1-Luc2 triple negative breast cancer, lung inflammation, and CT26 colorectal cancer animal models in female mice compared to respective FDA-approved nanotherapeutics or lipid compositions. Thus, SM-Chol represents a promising platform for universal and improved drug delivery.


Assuntos
Bicamadas Lipídicas , Esfingomielinas , Humanos , Feminino , Camundongos , Animais , Bicamadas Lipídicas/química , Esfingomielinas/química , Lipossomos/química , Fosfolipídeos/química , Colesterol/química
9.
Sustain Cities Soc ; 96: 104716, 2023 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-37323626

RESUMO

When the COVID-19 pandemic swept across the world, people tended to seek more individualized and viable transportation modes, such as a bicycle. In this study, we examined the factors influencing changes in public bike sharing (PBS) in Seoul, to assess this trend post-pandemic. We conducted an online survey of 1,590 Seoul PBS users between July 30 and August 7, 2020. Using a difference-in-differences analysis, we found that participants who were affected by the pandemic used PBS 44.6 h more than unaffected individuals throughout the year. In addition, we used a multinomial logistic regression analysis to identify the factors affecting changes in PBS usage. In this analysis, the discrete dependent variables of increased, unchanged, and decreased were considered, representing the changes in PBS usage after the COVID-19 outbreak. Results revealed that PBS usage increased among female participants during weekday trips such as commuting to work and when there were perceived health benefits of using PBS. Conversely, PBS usage tended to decrease when the weekday trip purpose was for leisure or working out. Our findings offer insight into PBS user behaviors within the context of the COVID-19 pandemic and present policy implications to revitalize PBS usage.

10.
J Control Release ; 349: 929-939, 2022 09.
Artigo em Inglês | MEDLINE | ID: mdl-35926754

RESUMO

Camptothesome is an innovative nanovesicle therapeutic comprising the sphingomyelin-derived camptothecin (CPT) lipid bilayer. In this work, we deciphered that Camptothesome was taken up by colorectal cancer (CRC) cells through primarily the clathrin-mediated endocytotic pathway and displayed the potential of eliciting robust immunogenic cancer cell death (ICD) via upregulating calreticulin, high mobility group box 1 protein (HMGB-1), and adenosine triphosphate (ATP), three hallmarks involved in the induction of ICD. In addition, use of dying MC38 tumor cells treated with Camptothesome as vaccine prevented tumor growth in 60% mice that received subsequent injection of live MC38 cells on the contralateral flank, validating Camptothesome was a legitimate ICD inducer in vivo. Camptothesome markedly reduced the acute bone marrow toxicity and gastrointestinal mucositis associated with free CPT and beat free CPT and Onivyde on anti-CRC efficacy and immune responses in a partially interferon gamma (IFN-γ)-dependent manner. Furthermore, Camptothesome enhanced the efficacy of immune checkpoint inhibitors to shrink late-stage orthotopic MC38 CRC tumors with diminished tumor metastasis and markedly prolonged mice survival.


Assuntos
Neoplasias Colorretais , Morte Celular Imunogênica , Trifosfato de Adenosina , Animais , Calreticulina/metabolismo , Calreticulina/uso terapêutico , Linhagem Celular Tumoral , Clatrina/metabolismo , Neoplasias Colorretais/patologia , Proteínas HMGB/metabolismo , Inibidores de Checkpoint Imunológico , Interferon gama/metabolismo , Irinotecano , Bicamadas Lipídicas , Camundongos , Esfingomielinas
11.
Front Plant Sci ; 12: 724487, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34975933

RESUMO

Past studies of plant disease and pest recognition used classification methods that presented a singular recognition result to the user. Unfortunately, incorrect recognition results may be output, which may lead to further crop damage. To address this issue, there is a need for a system that suggest several candidate results and allow the user to make the final decision. In this study, we propose a method for diagnosing plant diseases and identifying pests using deep features based on transfer learning. To extract deep features, we employ pre-trained VGG and ResNet 50 architectures based on the ImageNet dataset, and output disease and pest images similar to a query image via a k-nearest-neighbor algorithm. In this study, we use a total of 23,868 images of 19 types of hot-pepper diseases and pests, for which, the proposed model achieves accuracies of 96.02 and 99.61%, respectively. We also measure the effects of fine-tuning and distance metrics. The results show that the use of fine-tuning-based deep features increases accuracy by approximately 0.7-7.38%, and the Bray-Curtis distance achieves an accuracy of approximately 0.65-1.51% higher than the Euclidean distance.

12.
Mycobiology ; 48(4): 321-325, 2020 Jun 02.
Artigo em Inglês | MEDLINE | ID: mdl-32952415

RESUMO

A Colletotrichum species was isolated from leaves of Cymbidium exhibiting symptoms of anthracnose. In this study, the isolates obtained were identified based on recent taxonomic approaches for the genus Colletotrichum. The identity of the causal pathogen was confirmed using morphological data and phylogenetic analysis of combined multi-gene dataset (internal transcribed spacer, glyceraldehyde 3-phosphate dehydrogenase, chitin synthase-1, actin, histone3, beta-tubulin, and calmodulin). Pathogenicity testing revealed that the isolates were pathogenic to Cymbidium. Based on these results, the fungal pathogen occurring on Cymbidium orchids was identified as Colletotrichum cymbidiicola, which is a newly recorded species in Korea.

13.
Front Plant Sci ; 11: 559172, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33584739

RESUMO

Detecting plant diseases in the earliest stages, when remedial intervention is most effective, is critical if damage crop quality and farm productivity is to be contained. In this paper, we propose an improved vision-based method of detecting strawberry diseases using a deep neural network (DNN) capable of being incorporated into an automated robot system. In the proposed approach, a backbone feature extractor named PlantNet, pre-trained on the PlantCLEF plant dataset from the LifeCLEF 2017 challenge, is installed in a two-stage cascade disease detection model. PlantNet captures plant domain knowledge so well that it outperforms a pre-trained backbone using an ImageNet-type public dataset by at least 3.2% in mean Average Precision (mAP). The cascade detector also improves accuracy by up to 5.25% mAP. The results indicate that PlantNet is one way to overcome the lack-of-annotated-data problem by applying plant domain knowledge, and that the human-like cascade detection strategy effectively improves the accuracy of automated disease detection methods when applied to strawberry plants.

14.
Mycobiology ; 48(5): 418-422, 2020 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-33177921

RESUMO

In 2016, a cercosporoid fungus was found from leaf spot symptoms on melon in Korea. The fungus isolated from the plant was identified based on morphological characteristics and sequence analyses of five genes (ITS rDNA, translation elongation factor 1-α, actin, calmodulin, and histone H3). The fungal isolate was found to be pathogenic to melon. The results confirm that the fungus associated with leaf spot on melon was Cercospora cf. flagellaris. This is the first report of Cercospora cf. flagellaris causing Cercospora leaf spot on melon in Korea.

15.
Micromachines (Basel) ; 10(10)2019 Sep 28.
Artigo em Inglês | MEDLINE | ID: mdl-31569412

RESUMO

Nanoimprint lithography (NIL) is a micro/nanoscale patterning technology on thermoplastic polymer films, and has been widely used to fabricate functional micro/nanoscale patterns. NIL was also used to develop micro/nanoscale patterns on curved surfaces by employing flexible polymer stamps or micropatterned metal molds with macroscopic curvatures. In this study, two-step ultrasonic forming was used to develop micropatterns on a curved surface out of a flat metal stamp, by connecting ultrasonic imprinting and stretching processes. Ultrasonic imprinting was used to replicate functional micropatterns on a flat polymer film, using a flat ultrasonic horn and micropatterned metal stamps with prism and dot micropatterns. An ultrasonic stretching process was then used to form a curvature on the patterned film using a curved ultrasonic horn and a soft mold insert, to avoid damage to the pre-developed micropatterns. The ultrasonic horn was designed to have three different tip radii, and the resulting forming depth and curvature formation were investigated experimentally. As a result, three different curved surfaces containing two different micropatterns were obtained. The developed curved films containing micropatterns were then evaluated optically, and showed different optical diffusion and illumination characteristics according to the film curvature and micropattern type. These results indicate that the proposed technology can extend the functionality of conventional micropatterned products by imposing appropriate curvatures.

16.
Opt Express ; 15(8): 4929-34, 2007 Apr 16.
Artigo em Inglês | MEDLINE | ID: mdl-19532741

RESUMO

In this paper, an all-optical nonlinear gate employing a folded tandem-SOA structure is proposed. With a partial reflection mirror for the amplified signal, we achieve a self-seeded gain modulation effect in the folded tandem-SOA, thus eliminating an external saturating source required for the conventional tandem-SOA optical gate. The performance analysis of the proposed device as a 2R regenerator / logic gates (NOR) shows excellent compatibility with the conventional structure, but in a highly integrated form with added benefit of wavelength transparency over wide spectral bandwidth (>100nm). Studies also have been carried out to investigate optimum operation condition of the device as a function of input wavelength and signal input power.

17.
Opt Express ; 15(11): 6874-82, 2007 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-19547000

RESUMO

We propose a multi-port, multi-wavelength supervisory system for the in-service transmission line monitoring of a bidirectional WDM-PON system. Identifying unique requirements for the performance monitoring of a real field WDM-PON system, we define the architecture for the supervisory system and utilize the most up-to-date technologies (Simplex coding, tunable source, and optical switches) to demonstrate a successful interrogation of a transmission line up to 16 ports x 32 nodes (512 user) capacity. Monitoring of individual branch traces up to 60 km was achieved with the application of a 127-bit simplex code corresponding to a 7.5dB SNR coding gain. In-service transmission experiments showed negligible penalty from the monitoring system to the transmission signal quality, at a 2.5Gbps / 125Mbps (down / up stream) data rate.

18.
Mycobiology ; 45(3): 160-171, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-29138620

RESUMO

Larvae of Bradysia agrestis, an insect vector that transports plant pathogens, were sampled from geographically isolated regions in Korea to identify their cutaneous fungal and bacterial flora. Sampled areas were chosen within the distribution range of B. agrestis; each site was more than 91 km apart to ensure geographical segregation. We isolated 76 microbial (fungi and bacteria) strains (site 1, 29; site 2, 29; site 3, 18 strains) that were identified on the basis of morphological differences. Species identification was molecularly confirmed by determination of universal fungal internal transcribed spacer and bacterial 16S rRNA gene sequences in comparison to sequences in the EzTaxon database and the NCBI GenBank database, and their phylogenetic relationships were determined. The fungal isolates belonged to 2 phyla, 5 classes, and 7 genera; bacterial species belonged to 23 genera and 32 species. Microbial diversity differed significantly among the geographical groups with respect to Margalef's richness (3.9, 3.6, and 4.5), Menhinick's index (2.65, 2.46, and 3.30), Simpson's index (0.06, 0.12, and 0.01), and Shannon's index (2.50, 2.17, and 2.58). Although the microbial genera distribution or diversity values clearly varied among geographical groups, common genera were identified in all groups, including the fungal genus Cladosporium, and the bacterial genera Bacillus and Rhodococcus. According to classic principles of co-evolutionary relationship, these genera might have a closer association with their host insect vector B. agrestis than other genera identified. Some cutaneous bacterial genera (e.g., Pseudomonas) displaying weak interdependency with insect vectors may be hazardous to agricultural environments via mechanical transmission via B. agrestis. This study provides comprehensive information regarding the cutaneous microflora of B. agrestis, which can help in the control of such pests for crop management.

19.
Mycobiology ; 44(3): 187-190, 2016 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-27790070

RESUMO

In July 2015, diseased leaves of black chokeberry (Aronia melanocarpa) were observed in Danyang and Gochang, Korea. The symptoms appeared as circular or irregular brown leaf spots, from which Alternaria tenuissima was isolated. The isolates were cultured on potato dextrose agar, and their morphological characteristics were observed under a light microscope. The colonies were whitish to ash colored. The pathogenicity test on healthy black chokeberry leaves produced circular brown spots, in line with the original symptoms. Molecular analyses of the ITS, GPD, RPB2, and TEF genes were conducted to confirm the identity of the pathogen. The phylogeny of the multi-gene sequences indicated that the causal agent was A. tenuissima. This study is the first report of A. tenuissima leaf spot on black chokeberry (A. melanocarpa).

20.
Mycobiology ; 43(3): 231-8, 2015 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-26539039

RESUMO

A total of 4 aquatic plants, Eleocharis kuroguwai Ohwi, Hydrocharis dubia Backer, Salvinia natans All., and Zizania latifolia Turcz., were sampled from representative two wetlands of South Korea. A total of 38 endophytic fungal strains were isolated from aquatic plants native to the Daepyeong wetland, and 27 strains were isolated from the Jilnal wetland. The internal transcribed spacer regions of fungal isolates were sequenced and a phylogenetic analysis was performed. In addition, endophytic fungal diversity from each wetland and host plant species was deduced. A total of 25 fungal genera were purely isolated, and 16 fungal genera were isolated from each of the two wetlands. Commonly isolated genera from both wetlands were Aspergillus, Cladosporium, Clonostachys, Fusarium, Leptosphaeria, Penicillium, and Talaromyces. This study revealed that fungal diversity varied with environmental conditions and by host plant in representative two wetlands.

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