Pesquisa | Secretaria de Estado da Saúde

1.

Rapid Parallel Adaptation to Anthropogenic Heavy Metal Pollution.

Papadopulos, Alexander S T; Helmstetter, Andrew J; Osborne, Owen G; Comeault, Aaron A; Wood, Daniel P; Straw, Edward A; Mason, Laurence; Fay, Michael F; Parker, Joe; Dunning, Luke T; Foote, Andrew D; Smith, Rhian J; Lighten, Jackie.

Mol Biol Evol ; 38(9): 3724-3736, 2021 08 23.

Artigo Inglês | MEDLINE | ID: mdl-33950261

2.

Genome-wide signatures of convergent evolution in echolocating mammals.

Parker, Joe; Tsagkogeorga, Georgia; Cotton, James A; Liu, Yuan; Provero, Paolo; Stupka, Elia; Rossiter, Stephen J.

Nature ; 502(7470): 228-31, 2013 Oct 10.

Artigo Inglês | MEDLINE | ID: mdl-24005325

3.

Speciation processes in putative island endemic sister bat species: false impressions from mitochondrial DNA and microsatellite data.

Kuo, Hao-Chih; Chen, Shiang-Fan; Fang, Yin-Ping; Cotton, James A; Parker, Joe D; Csorba, Gábor; Lim, Burton K; Eger, Judith L; Chen, Chia-Hong; Chou, Cheng-Han; Rossiter, Stephen J.

Mol Ecol ; 24(23): 5910-26, 2015 Dec.

Artigo Inglês | MEDLINE | ID: mdl-26475683

4.

Generation of neutralizing antibodies and divergence of SIVmac239 in cynomolgus macaques following short-term early antiretroviral therapy.

Ozkaya Sahin, Gülsen; Bowles, Emma J; Parker, Joe; Uchtenhagen, Hannes; Sheik-Khalil, Enas; Taylor, Stephen; Pybus, Oliver G; Mäkitalo, Barbro; Walther-Jallow, Lilian; Spångberg, Mats; Thorstensson, Rigmor; Achour, Adnane; Fenyö, Eva Maria; Stewart-Jones, Guillaume B E; Spetz, Anna-Lena.

PLoS Pathog ; 6(9): e1001084, 2010 Sep 02.

Artigo Inglês | MEDLINE | ID: mdl-20824092

5.

Joe Parker.

Parker, Joe.

Curr Biol ; 32(1): R6-R8, 2022 01 10.

Artigo Inglês | MEDLINE | ID: mdl-35016000

6.

Reverse-Transcription Loop-Mediated Isothermal Amplification Has High Accuracy for Detecting Severe Acute Respiratory Syndrome Coronavirus 2 in Saliva and Nasopharyngeal/Oropharyngeal Swabs from Asymptomatic and Symptomatic Individuals.

Kidd, Stephen P; Burns, Daniel; Armson, Bryony; Beggs, Andrew D; Howson, Emma L A; Williams, Anthony; Snell, Gemma; Wise, Emma L; Goring, Alice; Vincent-Mistiaen, Zoe; Grippon, Seden; Sawyer, Jason; Cassar, Claire; Cross, David; Lewis, Thomas; Reid, Scott M; Rivers, Samantha; James, Joe; Skinner, Paul; Banyard, Ashley; Davies, Kerrie; Ptasinska, Anetta; Whalley, Celina; Ferguson, Jack; Bryer, Claire; Poxon, Charlie; Bosworth, Andrew; Kidd, Michael; Richter, Alex; Burton, Jane; Love, Hannah; Fouch, Sarah; Tillyer, Claire; Sowood, Amy; Patrick, Helen; Moore, Nathan; Andreou, Michael; Morant, Nick; Houghton, Rebecca; Parker, Joe; Slater-Jefferies, Joanne; Brown, Ian; Gretton, Cosima; Deans, Zandra; Porter, Deborah; Cortes, Nicholas J; Douglas, Angela; Hill, Sue L; Godfrey, Keith M; Fowler, Veronica L.

J Mol Diagn ; 24(4): 320-336, 2022 04.

Artigo Inglês | MEDLINE | ID: mdl-35121140

7.

The mode and tempo of hepatitis C virus evolution within and among hosts.

Gray, Rebecca R; Parker, Joe; Lemey, Philippe; Salemi, Marco; Katzourakis, Aris; Pybus, Oliver G.

BMC Evol Biol ; 11: 131, 2011 May 19.

Artigo Inglês | MEDLINE | ID: mdl-21595904

8.

Safety and immunogenicity of novel recombinant BCG and modified vaccinia virus Ankara vaccines in neonate rhesus macaques.

Rosario, Maximillian; Fulkerson, John; Soneji, Shamit; Parker, Joe; Im, Eung-Jun; Borthwick, Nicola; Bridgeman, Anne; Bourne, Charles; Joseph, Joan; Sadoff, Jerald C; Hanke, Tomás.

J Virol ; 84(15): 7815-21, 2010 Aug.

Artigo Inglês | MEDLINE | ID: mdl-20484495

9.

Diagnostic accuracy of loop-mediated isothermal amplification coupled to nanopore sequencing (LamPORE) for the detection of SARS-CoV-2 infection at scale in symptomatic and asymptomatic populations.

Ptasinska, Anetta; Whalley, Celina; Bosworth, Andrew; Poxon, Charlotte; Bryer, Claire; Machin, Nicholas; Grippon, Seden; Wise, Emma L; Armson, Bryony; Howson, Emma L A; Goring, Alice; Snell, Gemma; Forster, Jade; Mattocks, Chris; Frampton, Sarah; Anderson, Rebecca; Cleary, David; Parker, Joe; Boukas, Konstantinos; Graham, Nichola; Cellura, Doriana; Garratt, Emma; Skilton, Rachel; Sheldon, Hana; Collins, Alla; Ahmad, Nusreen; Friar, Simon; Burns, Daniel; Williams, Tim; Godfrey, Keith M; Deans, Zandra; Douglas, Angela; Hill, Sue; Kidd, Michael; Porter, Deborah; Kidd, Stephen P; Cortes, Nicholas J; Fowler, Veronica; Williams, Tony; Richter, Alex; Beggs, Andrew D.

Clin Microbiol Infect ; 27(9): 1348.e1-1348.e7, 2021 Sep.

Artigo Inglês | MEDLINE | ID: mdl-33901668

10.

Full-length characterization of hepatitis C virus subtype 3a reveals novel hypervariable regions under positive selection during acute infection.

Humphreys, Isla; Fleming, Vicki; Fabris, Paolo; Parker, Joe; Schulenberg, Bodo; Brown, Anthony; Demetriou, Charis; Gaudieri, Silvana; Pfafferott, Katja; Lucas, Michaela; Collier, Jane; Huang, Kuan-Hsiang Gary; Pybus, Oliver G; Klenerman, Paul; Barnes, Eleanor.

J Virol ; 83(22): 11456-66, 2009 Nov.

Artigo Inglês | MEDLINE | ID: mdl-19740991

11.

Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty.

Parker, Joe; Rambaut, Andrew; Pybus, Oliver G.

Infect Genet Evol ; 8(3): 239-46, 2008 May.

Artigo Inglês | MEDLINE | ID: mdl-17921073

12.

Field-based species identification of closely-related plants using real-time nanopore sequencing.

Parker, Joe; Helmstetter, Andrew J; Devey, Dion; Wilkinson, Tim; Papadopulos, Alexander S T.

Sci Rep ; 7(1): 8345, 2017 08 21.

Artigo Inglês | MEDLINE | ID: mdl-28827531

13.

Evolutionary and Phylogenetic Analysis of the Hepaciviruses and Pegiviruses.

Thézé, Julien; Lowes, Sophia; Parker, Joe; Pybus, Oliver G.

Genome Biol Evol ; 7(11): 2996-3008, 2015 Oct 21.

Artigo Inglês | MEDLINE | ID: mdl-26494702

14.

Phylogenomic analyses elucidate the evolutionary relationships of bats.

Tsagkogeorga, Georgia; Parker, Joe; Stupka, Elia; Cotton, James A; Rossiter, Stephen J.

Curr Biol ; 23(22): 2262-2267, 2013 Nov 18.

Artigo Inglês | MEDLINE | ID: mdl-24184098

15.

Selected HIV-1 Env trimeric formulations act as potent immunogens in a rabbit vaccination model.

Heyndrickx, Leo; Stewart-Jones, Guillaume; Jansson, Marianne; Schuitemaker, Hanneke; Bowles, Emma; Buonaguro, Luigi; Grevstad, Berit; Vinner, Lasse; Vereecken, Katleen; Parker, Joe; Ramaswamy, Meghna; Biswas, Priscilla; Vanham, Guido; Scarlatti, Gabriella; Fomsgaard, Anders.

PLoS One ; 8(9): e74552, 2013.

Artigo Inglês | MEDLINE | ID: mdl-24023951

16.

Estimating the date of origin of an HIV-1 circulating recombinant form.

Tee, Kok Keng; Pybus, Oliver G; Parker, Joe; Ng, Kee Peng; Kamarulzaman, Adeeba; Takebe, Yutaka.

Virology ; 387(1): 229-34, 2009 Apr 25.

Artigo Inglês | MEDLINE | ID: mdl-19272628

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