Detalhe da pesquisa
1.
HaploBlocks: Efficient Detection of Positive Selection in Large Population Genomic Datasets.
Mol Biol Evol
; 40(3)2023 03 04.
Artigo
Inglês
| MEDLINE | ID: mdl-36790822
2.
fimpera: drastic improvement of Approximate Membership Query data-structures with counts.
Bioinformatics
; 39(5)2023 05 04.
Artigo
Inglês
| MEDLINE | ID: mdl-37195454
3.
k mdiff, large-scale and user-friendly differential k-mer analyses.
Bioinformatics
; 38(24): 5443-5445, 2022 12 13.
Artigo
Inglês
| MEDLINE | ID: mdl-36315078
4.
The K-mer File Format: a standardized and compact disk representation of sets of k-mers.
Bioinformatics
; 38(18): 4423-4425, 2022 09 15.
Artigo
Inglês
| MEDLINE | ID: mdl-35904548
5.
SVJedi: genotyping structural variations with long reads.
Bioinformatics
; 36(17): 4568-4575, 2020 11 01.
Artigo
Inglês
| MEDLINE | ID: mdl-32437523
6.
Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs.
Bioinformatics
; 36(5): 1374-1381, 2020 03 01.
Artigo
Inglês
| MEDLINE | ID: mdl-30785192
7.
SimkaMin: fast and resource frugal de novo comparative metagenomics.
Bioinformatics
; 36(4): 1275-1276, 2020 02 15.
Artigo
Inglês
| MEDLINE | ID: mdl-31504187
8.
De novo clustering of long reads by gene from transcriptomics data.
Nucleic Acids Res
; 47(1): e2, 2019 01 10.
Artigo
Inglês
| MEDLINE | ID: mdl-30260405
9.
Cytosine methylation of mature microRNAs inhibits their functions and is associated with poor prognosis in glioblastoma multiforme.
Mol Cancer
; 19(1): 36, 2020 02 25.
Artigo
Inglês
| MEDLINE | ID: mdl-32098627
10.
Critical Assessment of Metagenome Interpretation-a benchmark of metagenomics software.
Nat Methods
; 14(11): 1063-1071, 2017 Nov.
Artigo
Inglês
| MEDLINE | ID: mdl-28967888
11.
Peptimapper: proteogenomics workflow for the expert annotation of eukaryotic genomes.
BMC Genomics
; 20(1): 56, 2019 Jan 17.
Artigo
Inglês
| MEDLINE | ID: mdl-30654742
12.
Reference-free detection of isolated SNPs.
Nucleic Acids Res
; 43(2): e11, 2015 Jan.
Artigo
Inglês
| MEDLINE | ID: mdl-25404127
13.
Read mapping on de Bruijn graphs.
BMC Bioinformatics
; 17(1): 237, 2016 Jun 16.
Artigo
Inglês
| MEDLINE | ID: mdl-27306641
14.
SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population.
BMC Genomics
; 17: 121, 2016 Feb 18.
Artigo
Inglês
| MEDLINE | ID: mdl-26892170
15.
Toward perfect reads: self-correction of short reads via mapping on de Bruijn graphs.
Bioinformatics
; 36(2): 651, 2020 01 15.
Artigo
Inglês
| MEDLINE | ID: mdl-31808510
16.
Mutations and genomic islands can explain the strain dependency of sugar utilization in 21 strains of Propionibacterium freudenreichii.
BMC Genomics
; 16: 296, 2015 Apr 15.
Artigo
Inglês
| MEDLINE | ID: mdl-25886522
17.
GATB: Genome Assembly & Analysis Tool Box.
Bioinformatics
; 30(20): 2959-61, 2014 Oct 15.
Artigo
Inglês
| MEDLINE | ID: mdl-24990603
18.
Indexing and real-time user-friendly queries in terabyte-sized complex genomic datasets with kmindex and ORA.
Nat Comput Sci
; 4(2): 104-109, 2024 Feb.
Artigo
Inglês
| MEDLINE | ID: mdl-38413777
19.
Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer.
BMC Bioinformatics
; 13: 48, 2012 Mar 23.
Artigo
Inglês
| MEDLINE | ID: mdl-22443449
20.
Compareads: comparing huge metagenomic experiments.
BMC Bioinformatics
; 13 Suppl 19: S10, 2012.
Artigo
Inglês
| MEDLINE | ID: mdl-23282463