The evolution of the surface of the mineral schreibersite in prebiotic chemistry.

We present a study of the reactions of the meteoritic mineral schreibersite (Fe,Ni)3P, focusing primarily on surface chemistry and prebiotic phosphorylation. In this work, a synthetic analogue of the mineral was synthesized by mixing stoichiometric proportions of elemental iron, nickel and phosphorus and heating in a tube furnace at 820 °C for approximately 235 hours under argon or under vacuum, a modification of the method of Skála and Drábek (2002). Once synthesized, the schreibersite was characterized to confirm the identity of the product as well as to elucidate the oxidation processes affecting the surface. In addition to characterization of the solid product, this schreibersite was reacted with water or with organic solutes in a choline chloride-urea deep eutectic mixture, to constrain potential prebiotic products. Major inorganic solutes produced by reaction of water include orthophosphate, phosphite, pyrophosphate and hypophosphate consistent with prior work on Fe3P corrosion. Additionally, schreibersite corrodes in water and dries down to form a deep eutectic solution, generating phosphorylated products, in this case phosphocholine, using this synthesized schreibersite.

Thermal processing of formamide ices on silicate grain analogue.

Fourier transform-infrared spectroscopy (FT-IR) and temperature programmed desorption (TPD) have been used to examine the thermal processing of three isotopes of pure formamide ice (HCONH2, DCONH2, and HCOND2) adsorbed on a SiO2 interstellar grain analogue. Pure formamide ice on SiO2 nanoparticles displays at least three different phases that we interpret as a porous phase from ∼70-145 K, a compacted polycrystalline phase from ∼145-210 K, and a third slow diffusion and sublimation phase from ∼210-380 K. Possible dimerization is also discussed. Formamide desorption from the SiO2 grain surface is characterized by TPD of pure HCONH2 and mixed H2O:HCONH2 ices. Water desorbs at 160 K, and formamide has a TPD peak maximum at ∼228 K. A mean Eact of ∼14.7 kcal/mol (0.64 eV) was obtained using Redhead analysis, indicating strong intermolecular forces within formamide ice. The mixed H2O:HCONH2 ice TPD data suggests possible formamide accumulation if the grains are exposed to temperature cycles <180 K.

Radiation processing of formamide and formamide:water ices on silicate grain analogue.

Lyman-α (121.6 nm) photon and 1 keV electron-beam irradiation of pure HCONH2 (FA) ice and H2O:HCONH2 ice mixtures on high-surface-area SiO2 nanoparticles have been investigated with FT-IR spectroscopy and temperature programmed desorption (TPD). Lyman-α photolysis of pure amorphous FA ice grown at 70 K and crystalline FA ice produced by annealing to 165 K gives spectral signatures between 2120 and 2195 cm(-1) that we assign primarily to OCN(-) and CO. The OCN(-) and CO yields are ∼25% less abundant for crystalline FA ice. Photon and electron processing also produces H2 that is released from the ice between ∼90 and 140 K. A decrease in the H2 TPD peak is seen for irradiated crystalline HCONH2 ice. Lyman-α photolysis of H2O:HCONH2 mixed ices increases OCN(-) and CO production, suggesting a catalytic role of H2O. Also, for pure FA, 1 keV electron irradiation slightly increases the yield of OCN(-), while CO decarboxylation is selectively prevented. CO is also not produced in H2O:HCONH2 ices upon electron irradiation. Dissociative ionization, direct dissociative excitation, and dissociative electron attachment (DEA) channels are accessible in the Lyman-α (121.6 nm) photon and 1 keV electron-beam energy range. DEA energetically favors OCN(-) and H(-) formation, with the latter leading to H2 formation. The FA fragment product identities, yields, and branching ratios are considerably different relative to the gas phase and depend upon the radiation type, ice structure, and the presence of SiO2 nanoparticles. The latter may increase ion-electron recombination and radical recombination rates. The main products observed suggest very different condensed-phase dissociation channels from those reported for gas-phase dissociation. Formation of ions/products from FA is not negligible upon Lyman-α photolysis or electron irradiation, both of which could process ices in interstellar regions as well as in Titan's atmosphere.

Reactivity between non-energetic hydroxyl (OH) radicals and methane (CH4).

Reactions between dilute methane and nonenergetic hydroxyl radicals were carried out at 3.5 K. The temperature was kept low in order to characterize the stepwise reaction and prevent parasitic side reactions. The hydroxyl radicals originate from discharged H(2)O/He mixtures. The reactions were monitored in situ using a Fourier transform infrared spectrometer. The formation of CH(3) radicals was confirmed simultaneously with the formation of water ice. Subsequent recombination reactions lead to the formation of ethane (C(2)H(6)). Production of ethane and water ice occur preferentially to the formation of methanol.

Evidence on the formation of dimers of polycyclic aromatic hydrocarbons in a laminar diffusion flame.

The role of polycyclic aromatic hydrocarbons (PAHs) in the formation of nascent soot particles in flames is well established and yet the detailed mechanisms are still not fully understood. Here we provide experimental evidence of the occurrence of dimerization of PAHs in the gas phase before soot formation in a laminar diffusion methane flame, supporting the hypothesis of stabilization of dimers through the formation of covalent bonds. The main findings of this work derive from the comparative chemical analysis of samples extracted from the gas to soot transition region of a laminar diffusion methane flame, and highlight two different groups of hydrocarbons that coexist in the same mass range, but show distinctly different behavior when processed with statistical analysis. In particular, the identified hydrocarbons are small-to-moderate size PAHs (first group) and their homo- and heterodimers stabilized by the formation of covalent bonds (second group).

Glycoprofiling bifidobacterial consumption of galacto-oligosaccharides by mass spectrometry reveals strain-specific, preferential consumption of glycans.

Galacto-oligosaccharides (GOS) are versatile food ingredients that possess prebiotic properties. However, at present there is a lack of precise analytical methods to demonstrate specific GOS consumption by bifidobacteria. To better understand the role of GOS as prebiotics, purified GOS (pGOS) without disaccharides and monosaccharides was prepared and used in bacterial fermentation experiments. Growth curves showed that all bifidobacteria assayed utilized and grew on pGOS preparations. We used a novel mass spectrometry approach involving matrix-assisted laser desorption ionization-Fourier transform ion cyclotron resonance (MALDI-FTICR) to determine the composition of oligosaccharides in GOS syrup preparations. MALDI-FTICR analysis of spent fermentation media demonstrated that there was preferential consumption of selected pGOS species by different bifidobacteria. The approach described here demonstrates that MALDI-FTICR is a rapid-throughput tool for comprehensive profiling of oligosaccharides in GOS mixtures. In addition, the selective consumption of certain GOS species by different bifidobacteria suggests a means for targeting prebiotics to enrich select bifidobacterial species.