Deep learning and computer vision will transform entomology.

Most animal species on Earth are insects, and recent reports suggest that their abundance is in drastic decline. Although these reports come from a wide range of insect taxa and regions, the evidence to assess the extent of the phenomenon is sparse. Insect populations are challenging to study, and most monitoring methods are labor intensive and inefficient. Advances in computer vision and deep learning provide potential new solutions to this global challenge. Cameras and other sensors can effectively, continuously, and noninvasively perform entomological observations throughout diurnal and seasonal cycles. The physical appearance of specimens can also be captured by automated imaging in the laboratory. When trained on these data, deep learning models can provide estimates of insect abundance, biomass, and diversity. Further, deep learning models can quantify variation in phenotypic traits, behavior, and interactions. Here, we connect recent developments in deep learning and computer vision to the urgent demand for more cost-efficient monitoring of insects and other invertebrates. We present examples of sensor-based monitoring of insects. We show how deep learning tools can be applied to exceptionally large datasets to derive ecological information and discuss the challenges that lie ahead for the implementation of such solutions in entomology. We identify four focal areas, which will facilitate this transformation: 1) validation of image-based taxonomic identification; 2) generation of sufficient training data; 3) development of public, curated reference databases; and 4) solutions to integrate deep learning and molecular tools.

Saliency-Based Multilabel Linear Discriminant Analysis.

Linear discriminant analysis (LDA) is a classical statistical machine-learning method, which aims to find a linear data transformation increasing class discrimination in an optimal discriminant subspace. Traditional LDA sets assumptions related to the Gaussian class distributions and single-label data annotations. In this article, we propose a new variant of LDA to be used in multilabel classification tasks for dimensionality reduction on original data to enhance the subsequent performance of any multilabel classifier. A probabilistic class saliency estimation approach is introduced for computing saliency-based weights for all instances. We use the weights to redefine the between-class and within-class scatter matrices needed for calculating the projection matrix. We formulate six different variants of the proposed saliency-based multilabel LDA (SMLDA) based on different prior information on the importance of each instance for their class(es) extracted from labels and features. Our experiments show that the proposed SMLDA leads to performance improvements in various multilabel classification problems compared to several competing dimensionality reduction methods.

Automatic social distance estimation for photographic studies: Performance evaluation, test benchmark, and algorithm.

The social distancing regulations introduced to slow down the spread of COVID-19 virus directly affect a basic form of non-verbal communication, and there may be longer term impacts on human behavior and culture that remain to be analyzed in proxemics studies. To obtain quantitative results for such studies, large media and/or personal photo collections must be analyzed. Several social distance monitoring methods have been proposed for safety purposes, but they are not directly applicable to general photo collections with large variations in the imaging setup. In such studies, the interest shifts from safety to analyzing subtle differences in social distances. Currently, there is no suitable benchmark for developing such algorithms. Collecting images with measured ground-truth pair-wise distances using different camera settings is cumbersome. Moreover, performance evaluation for these algorithms is not straightforward, and there is no widely accepted evaluation protocol. In this paper, we provide an image dataset with measured pair-wise social distances under different camera positions and settings. We suggest a performance evaluation protocol and provide a benchmark to easily evaluate such algorithms. We also propose an automatic social distance estimation method that can be applied on general photo collections. Our method is a hybrid method that combines deep learning-based object detection and human pose estimation with projective geometry. The method can be applied on uncalibrated single images with known focal length and sensor size. The results on our benchmark are encouraging with 91% human detection rate and only 38.24% average relative distance estimation error among the detected people.

Training Radial Basis Function Neural Networks for Classification via Class-Specific Clustering.

In training radial basis function neural networks (RBFNNs), the locations of Gaussian neurons are commonly determined by clustering. Training inputs can be clustered on a fully unsupervised manner (input clustering), or some supervision can be introduced, for example, by concatenating the input vectors with weighted output vectors (input-output clustering). In this paper, we propose to apply clustering separately for each class (class-specific clustering). The idea has been used in some previous works, but without evaluating the benefits of the approach. We compare the class-specific, input, and input-output clustering approaches in terms of classification performance and computational efficiency when training RBFNNs. To accomplish this objective, we apply three different clustering algorithms and conduct experiments on 25 benchmark data sets. We show that the class-specific approach significantly reduces the overall complexity of the clustering, and our experimental results demonstrate that it can also lead to a significant gain in the classification performance, especially for the networks with a relatively few Gaussian neurons. Among other applied clustering algorithms, we combine, for the first time, a dynamic evolutionary optimization method, multidimensional particle swarm optimization, and the class-specific clustering to optimize the number of cluster centroids and their locations.