RESUMO
Challenges with in situ visualization of nonparticulate organics in porous materials limit understanding and modeling processes of transport, decomposition, and storage of organic compounds. In particular, it impedes deciphering the mechanisms driving accumulation and protection of soil organic matter (SOM), processes crucial for sustaining soil fertility and mitigating effects of global climate change. A recently proposed method of staining soil organics by OsO4 vapors with subsequent dual-energy X-ray computed microtomography scanning (µCT) offers new opportunities to visualize SOM within intact soil matrix. Our objective was to test the method's performance in staining different organic materials located in media with contrasting pore characteristics: (1) roots of switchgrass (Panicum virgatum L.), either placed within fine and coarse sands or grown within soil microcores, (2) biochar fragments, and (3) soils with relatively low and high C contents. We found that the method was effective in staining organic materials of root origin and the organics associated with fine soil particles, but not the biochar. The estimated percent of total C that reacted with OsO4 vapors ranged from 0.7% in plant roots to 3.2% in sand-free fraction of the high C soil and was only 0.2% in the studied biochar. Total soil C and Os concentrations were strongly linearly related, suggesting a potential for future method development. However, we would recommend caution when interpreting the results in cases when gas diffusion through the soil matrix is limited.
Assuntos
Compostos Orgânicos , Solo , Coloração e Rotulagem , Tomografia , Raios XRESUMO
Mineral inclusions in natural diamond are widely studied for the insight that they provide into the geochemistry and dynamics of the Earth's interior. A major challenge in achieving thorough yet high rates of analysis of mineral inclusions in diamond derives from the micrometre-scale of most inclusions, often requiring synchrotron radiation sources for diffraction. Centering microinclusions for diffraction with a highly focused synchrotron beam cannot be achieved optically because of the very high index of refraction of diamond. A fast, high-throughput method for identification of micromineral inclusions in diamond has been developed at the GeoSoilEnviro Center for Advanced Radiation Sources (GSECARS), Advanced Photon Source, Argonne National Laboratory, USA. Diamonds and their inclusions are imaged using synchrotron 3D computed X-ray microtomography on beamline 13-BM-D of GSECARS. The location of every inclusion is then pinpointed onto the coordinate system of the six-circle goniometer of the single-crystal diffractometer on beamline 13-BM-C. Because the bending magnet branch 13-BM is divided and delivered into 13-BM-C and 13-BM-D stations simultaneously, numerous diamonds can be examined during coordinated runs. The fast, high-throughput capability of the methodology is demonstrated by collecting 3D diffraction data on 53 diamond inclusions from Juína, Brazil, within a total of about 72â h of beam time.
Assuntos
Diamante/química , Síncrotrons , Microtomografia por Raio-X/métodos , Desenho de Equipamento , Fótons , Difração de Raios XRESUMO
Although relationships among the major groups of living gnathostomes are well established, the relatedness of early jawed vertebrates to modern clades is intensely debated. Here, we provide a new description of Gladbachus, a Middle Devonian (Givetian approx. 385-million-year-old) stem chondrichthyan from Germany, and one of the very few early chondrichthyans in which substantial portions of the endoskeleton are preserved. Tomographic and histological techniques reveal new details of the gill skeleton, hyoid arch and jaws, neurocranium, cartilage, scales and teeth. Despite many features resembling placoderm or osteichthyan conditions, phylogenetic analysis confirms Gladbachus as a stem chondrichthyan and corroborates hypotheses that all acanthodians are stem chondrichthyans. The unfamiliar character combination displayed by Gladbachus, alongside conditions observed in acanthodians, implies that pre-Devonian stem chondrichthyans are severely under-sampled and strongly supports indications from isolated scales that the gnathostome crown group originated at the latest by the early Silurian (approx. 440 Ma). Moreover, phylogenetic results highlight the likely convergent evolution of conventional chondrichthyan conditions among earliest members of this primary gnathostome division, while skeletal morphology points towards the likely suspension feeding habits of Gladbachus, suggesting a functional origin of the gill slit condition characteristic of the vast majority of living and fossil chondrichthyans.
Assuntos
Evolução Biológica , Tubarões/anatomia & histologia , Animais , Cartilagem/anatomia & histologia , Alemanha , Brânquias/anatomia & histologia , Osso Hioide/anatomia & histologia , Arcada Osseodentária/anatomia & histologia , Filogenia , Tubarões/classificação , Tomografia Computadorizada por Raios X , Dente/anatomia & histologiaRESUMO
X-ray microprobes (XRM) coupled with high-brightness synchrotron X-ray facilities are powerful tools for environmental biogeochemistry research. One such instrument, the XRM at the Geo Soil Enviro Center for Advanced Radiation Sources Sector 13 at the Advanced Photon Source (APS; Argonne National Laboratory, Lemont, IL) was recently improved as part of a canted undulator geometry upgrade of the insertion device port, effectively doubling the available undulator beam time and extending the operating energy of the branch supporting the XRM down to the sulfur K edge (2.3 keV). Capabilities include rapid, high-resolution, elemental imaging including fluorescence microtomography, microscale X-ray absorption fine structure spectroscopy including sulfur K edge capability, and microscale X-ray diffraction. These capabilities are advantageous for (i) two-dimensional elemental mapping of relatively large samples at high resolution, with the dwell times typically limited only by the count times needed to obtain usable counting statistics for low concentration elements, (ii) three-dimensional imaging of internal elemental distributions in fragile hydrated specimens, such as biological tissues, avoiding the need for physical slicing, (iii) spatially resolved speciation determinations of contaminants in environmental materials, and (iv) identification of contaminant host phases. In this paper, we describe the XRM instrumentation, techniques, applications demonstrating these capabilities, and prospects for further improvements associated with the proposed upgrade of the APS.
Assuntos
Monitoramento Ambiental , Síncrotrons , Solo , Espectroscopia por Absorção de Raios X , Difração de Raios XRESUMO
Data Exchange is a simple data model designed to interface, or `exchange', data among different instruments, and to enable sharing of data analysis tools. Data Exchange focuses on technique rather than instrument descriptions, and on provenance tracking of analysis steps and results. In this paper the successful application of the Data Exchange model to a variety of X-ray techniques, including tomography, fluorescence spectroscopy, fluorescence tomography and photon correlation spectroscopy, is described.
RESUMO
Attempts at understanding nanoparticle fate and transport in the subsurface environment are currently hindered by an inability to quantify nanoparticle behavior at the pore scale (within and between pores) within realistic pore networks. This paper is the first to present a method for high resolution quantification of silver nanoparticle (nAg) concentrations within porous media under controlled experimental conditions. This method makes it possible to extract silver nanoparticle concentrations within individual pores in static and quasi-dynamic (i.e., transport) systems. Quantification is achieved by employing absorption-edge synchrotron X-ray computed microtomography (SXCMT) and an extension of the Beer-Lambert law. Three-dimensional maps of X-ray mass linear attenuation are converted to SXCMT-determined nAg concentration and are found to closely match the concentrations determined by ICP analysis. In addition, factors affecting the quality of the SXCMT-determined results are investigated: 1) The acquisition of an additional above-edge data set reduced the standard deviation of SXCMT-determined concentrations; 2) X-ray refraction at the grain/water interface artificially depresses the SXCMT-determined concentrations within 18.1 µm of a grain surface; 3) By treating the approximately 20 × 10(6) voxels within each data set statistically (i.e., averaging), a high level of confidence in the SXCMT-determined mean concentrations can be obtained. This novel method provides the means to examine a wide range of properties related to nanoparticle transport in controlled laboratory porous medium experiments.
Assuntos
Nanopartículas Metálicas/química , Prata/química , Síncrotrons , Microtomografia por Raio-X/métodos , Porosidade , Incerteza , ÁguaRESUMO
Leaf venation networks mediate many plant resource fluxes and are therefore of broad interest to research questions in plant physiology, systematics, paleoecology, and physics. However, the study of these networks is limited by slow and destructive imaging methods. X-ray imaging of leaf veins is potentially rapid, of high resolution, and nondestructive. Here, we have developed theory for absorption- and phase-contrast X-ray imaging. We then experimentally test these approaches using a synchrotron light source and two commercially available X-ray instruments. Using synchrotron light, we found that major veins could be consistently visualized using absorption-contrast imaging with X-ray energies < 10 keV, while both major and minor veins could be consistently visualized with the use of an iodine contrast agent at an X-ray energy of 33.269 keV. Phase-contrast imaging at a range of energies provided high resolution but highlighted individual cell walls more than veins. Both approaches allowed several hundred samples to be processed per d. Commercial X-ray instruments were able to resolve major veins and some minor veins using absorption contrast. These results show that both commercial and synchrotron X-ray imaging can be successfully applied to leaf venation networks, facilitating research in multiple fields.
Assuntos
Folhas de Planta/anatomia & histologia , Espectroscopia por Absorção de Raios X/métodos , Asteraceae/anatomia & histologia , Meios de Contraste , Iodo , Síncrotrons , Tomografia Computadorizada por Raios X/métodosRESUMO
Within this work, we present the first true three-dimensional (3D) analysis of chondrule size. Knowledge about the physical properties of chondrules is important for validating astrophysical theories concerning chondrule formation and their aggregation into the chondritic meteorites (known as chondrites) that contain them. The classification of chondrites into chemical groups also relies on chondrule properties, including their dimensions. Within this work, we quantify the diameters of chondrules in five ordinary chondrites (OCs; comprised of the H, L, and LL chondrites) and one low-iron enstatite (EL) chondrite. To extract the chondrule size data, we use x-ray computed microtomography to image small (~1-2 cm3 ) chondrite samples followed by manual digital segmentation to isolate chondrules within the volumes or subvolumes. Our data yield true 3D results without stereographic corrections necessary for two-dimensional (2D) or petrographic thin section-based determinations of chondrule sizes. Our results are completely novel, but are consistent with previous surface analysis (2D) data for OCs. Within our OC chondrule diameter data, we find the trend of mean chondrule diameters increasing in the order H < L < LL. We also present the first detailed EL chondrite chondrule size-frequency distribution. Finally, we examine the shapes and collective orientations of the chondrules within the chondrites and show that chondrite petrofabrics can be explored with our methodology. Chondrule shape-preferred orientations are identical to the orientations of the metal and sulfide grains in the chondrites and this is likely due to impact-related compaction. HIGHLIGHTS: We present a first true three-dimensional analysis of chondrule size. Our ordinary chondrite chondrule diameter data demonstrate the trend of mean chondrule diameters increasing in the order H chondrites < L chondrites < LL chondrites. We also present the first detailed low-iron enstatite chondrite chondrule size-frequency distribution. We examine the shapes and collective orientations of the chondrules and show that chondrite petrofabrics can be explored with our methodology.
RESUMO
Increasing demand for global food production is leading to greater use of irrigation to supplement rainfall and enable more intensive use of land. Minimizing adverse impacts of this intensification on surface water and groundwater resources is of critical importance for the achievement of sustainable land use. In this paper we examine the linkages between irrigation runoff and resulting changes in quality of receiving surface waters and groundwaters in Australia and New Zealand. Case studies are used to illustrate impacts under different irrigation techniques (notably flood and sprinkler systems) and land uses, particularly where irrigation has led to intensification of land use. For flood irrigation, changes in surface water contaminant concentrations are directly influenced by the amount of runoff, and the intensity and kind of land use. Mitigation for flood irrigation is best achieved by optimizing irrigation efficiency. For sprinkler irrigation, leaching to groundwater is the main transport path for contaminants, notably nitrate. Mitigation measures for sprinkler irrigation should take into account irrigation efficiency and the proximity of intensive land uses to sensitive waters. Relating contaminant concentrations in receiving groundwaters to their dominant causes is often complicated by uncertainty about the subsurface flow paths and the possible pollutant sources, viz. drainage from irrigated land. This highlights the need for identification of the patterns and dynamics of surface and subsurface waters to identify such sources of contaminants and minimize their impacts on the receiving environments.
Assuntos
Irrigação Agrícola , Rios , Microbiologia da Água , Poluição da Água , Austrália , Nova ZelândiaRESUMO
Models of fluid flow are used to improve the efficiency of oil and gas extraction and to estimate the storage and leakage of carbon dioxide in geologic reservoirs. Therefore, a quantitative understanding of key parameters of rock-fluid interactions, such as contact angles, wetting, and the rate of spontaneous imbibition, is necessary if these models are to predict reservoir behavior accurately. In this study, aqueous fluid imbibition rates were measured in fractures in samples of the Eagle Ford Shale using neutron imaging. Several liquids, including pure water and aqueous solutions containing sodium bicarbonate and sodium chloride, were used to determine the impact of solution chemistry on uptake rates. Uptake rate analysis provided dynamic contact angles for the Eagle Ford Shale that ranged from 51 to 90° using the Schwiebert-Leong equation, suggesting moderately hydrophilic mineralogy. When corrected for hydrostatic pressure, the average contact angle was calculated as 76 ± 7°, with higher values at the fracture inlet. Differences in imbibition arising from differing fracture widths, physical liquid properties, and wetting front height were investigated. For example, bicarbonate-contacted samples had average contact angles that varied between 62 ± 10° and â¼84 ± 6° as the fluid rose in the column, likely reflecting a convergence-divergence structure within the fracture. Secondary imbibitions into the same samples showed a much more rapid uptake for water and sodium chloride solutions that suggested alteration of the clay in contact with the solution producing a water-wet environment. The same effect was not observed for sodium bicarbonate, which suggested that the bicarbonate ion prevented shale hydration. This study demonstrates how the imbibition rate measured by neutron imaging can be used to determine contact angles for solutions in contact with shale or other materials and that wetting properties can vary on a relatively fine scale during imbibition, requiring detailed descriptions of wetting for accurate reservoir modeling.
RESUMO
A modified Drickamer anvil apparatus has been developed to combine with monochromatic synchrotron radiation for high-pressure X-ray diffraction and radiography in the GSECARS bending-magnet station, 13-BM-D, at the Advanced Photon Source, Argonne, USA. Using this experimental set-up, deformation experiments can be carried out at pressures in excess of 30 GPa at high temperatures. Differential stresses and total axial strains of polycrystalline platinum and Mg(2)SiO(4) ringwoodite have been measured up to 32 GPa at room temperature using tungsten carbide anvils. The total axial strain of the platinum increases with pressure and reaches about 55% at the highest pressure. A test run using a composite sintered diamond anvil system was performed. The use of X-ray-tranparent anvils enables the entire Debye rings to be observed up to 10 degrees 2theta. With high-energy photons (65-70 keV), this allows a coverage in Q (= 2pi sintheta/lambda) to about 3 A(-1), thus making it possible to evaluate hydrostatic pressure and differential stress in crystalline minerals using diffraction. This, coupled with the ability to determine axial strain, allows deformation studies to be performed to pressures above 30 GPa.
RESUMO
The interaction between fine grains and the surrounding interstitial gas in a granular bed can lead to qualitatively new phenomena not captured in a simple, single-fluid model of granular flows. This is demonstrated by the granular jet formed by the impact of a solid sphere into a bed of loose, fine sand. Unlike jets formed by impact in fluids, this jet is actually composed of two separate components, an initial thin jet formed by the collapse of the cavity left by the impacting object stacked on top of a second, thicker jet which depends strongly on the ambient gas pressure. This complex structure is the result of an interplay between ambient gas, bed particles, and impacting sphere. Here we present the results of systematic experiments that combine measurements of the jet above the surface varying the release height, sphere diameter, container size, and bed material with x-ray radiography below the surface to connect the changing response of the bed to the changing structure of the jet. We find that the interstitial gas trapped by the low permeability of a fine-grained bed plays two distinct roles in the formation of the jet. First, gas trapped and compressed between grains prevents compaction, causing the bed to flow like an incompressible fluid and allowing the impacting object to sink deep into the bed. Second, the jet is initiated by the gravity driven collapse of the cavity left by the impacting object. If the cavity is large enough, gas trapped and compressed by the collapsing cavity can amplify the jet by directly pushing bed material upwards and creating the thick jet. As a consequence of these two factors, when the ambient gas pressure is decreased, there is a crossover from a nearly incompressible, fluidlike response of the bed to a highly compressible, dissipative response. Compaction of the bed at reduced pressure reduces the final depth of the impacting object, resulting in a smaller cavity and in the demise of the thick jet.
RESUMO
We describe an x-ray absorption method for in situ density measurement of non-crystalline materials in the diamond anvil cell using a monochromatic synchrotron x-ray microbeam. Sample thickness, which is indispensable in the absorption method, can be determined precisely by extrapolating the thickness profile of the gasket obtained by x-ray absorption and diffraction measurements. Diamond deformation across the sample chamber becomes noticeable at high pressures above 10 GPa, which can be monitored with a precision better than 1%, as demonstrated by measurements on crystalline Ag. We have applied the developed method to measure densities of the classic network-forming GeO(2) glass in octahedral form at pressures up to 56 GPa. The fit to the pressure-volume data with the Birch-Murnaghan equation from 13 to 56 GPa gives parameters of V(0)=23.2+/-0.4 cm(3)mol and K=35.8+/-3.0 GPa, assuming that K(')=4. This method could be applicable for in situ determination of the density of liquids and other noncrystalline materials using a diamond anvil cell up to ultrahigh pressures.
Assuntos
Absorciometria de Fóton/instrumentação , Diamante/química , Teste de Materiais/instrumentação , Manejo de Espécimes/instrumentação , Difração de Raios X/instrumentação , Absorciometria de Fóton/métodos , Cristalografia , Desenho de Equipamento , Análise de Falha de Equipamento , Teste de Materiais/métodos , Pressão , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Manejo de Espécimes/métodos , Difração de Raios X/métodosRESUMO
Global earthquake occurring rate displays an exponential decay down to ~300 km and then peaks around 550 to 600 km before terminating abruptly near 700 km. How fractures initiate, nucleate, and propagate at these depths remains one of the greatest puzzles in earth science, as increasing pressure inhibits fracture propagation. We report nanoseismological analysis on high-resolution acoustic emission (AE) records obtained during ruptures triggered by partial transformation from olivine to spinel in Mg2GeO4, an analog to the dominant mineral (Mg,Fe)2SiO4 olivine in the upper mantle, using state-of-the-art seismological techniques, in the laboratory. AEs' focal mechanisms, as well as their distribution in both space and time during deformation, are carefully analyzed. Microstructure analysis shows that AEs are produced by the dynamic propagation of shear bands consisting of nanograined spinel. These nanoshear bands have a near constant thickness (~100 nm) but varying lengths and self-organize during deformation. This precursory seismic process leads to ultimate macroscopic failure of the samples. Several source parameters of AE events were extracted from the recorded waveforms, allowing close tracking of event initiation, clustering, and propagation throughout the deformation/transformation process. AEs follow the Gutenberg-Richter statistics with a well-defined b value of 1.5 over three orders of moment magnitudes, suggesting that laboratory failure processes are self-affine. The seismic relation between magnitude and rupture area correctly predicts AE magnitude at millimeter scales. A rupture propagation model based on strain localization theory is proposed. Future numerical analyses may help resolve scaling issues between laboratory AE events and deep-focus earthquakes.
RESUMO
In situ high energy X-ray pair distribution function (PDF) measurements, microtomography and reverse Monte Carlo simulations were used to characterize the local structure of liquid gallium up to 1.9 GPa. This pressure range includes the well-known solid-solid phase transition from Ga-I to Ga-II at low temperature. In term of previous research, the local structure of liquid gallium within this domain was suggested a mixture of two local structures, Ga I and Ga II, based on fitting experimental PDF to known crystal structure, with a controversy. However, our result shows a distinctly different result that the local structure of liquid gallium resembles the atomic arrangement of both gallium phase II and III (the high pressure crystalline phase). A melting mechanism is proposed for Ga, in which the atomic structure of phase Ι breaks up at the onset of melting, providing sufficient free volume for atoms to rearrange, to form the melt.
RESUMO
In this report we describe detailed procedures for carrying out single crystal X-ray diffraction experiments with a diamond anvil cell (DAC) at the GSECARS 13-BM-C beamline at the Advanced Photon Source. The DAC program at 13-BM-C is part of the Partnership for Extreme Xtallography (PX^2) project. BX-90 type DACs with conical-type diamond anvils and backing plates are recommended for these experiments. The sample chamber should be loaded with noble gas to maintain a hydrostatic pressure environment. The sample is aligned to the rotation center of the diffraction goniometer. The MARCCD area detector is calibrated with a powder diffraction pattern from LaB6. The sample diffraction peaks are analyzed with the ATREX software program, and are then indexed with the RSV software program. RSV is used to refine the UB matrix of the single crystal, and with this information and the peak prediction function, more diffraction peaks can be located. Representative single crystal diffraction data from an omphacite (Ca0.51Na0.48)(Mg0.44Al0.44Fe2+0.14Fe3+0.02)Si2O6 sample were collected. Analysis of the data gave a monoclinic lattice with P2/n space group at 0.35 GPa, and the lattice parameters were found to be: a = 9.496 ±0.006 Å, b = 8.761 ±0.004 Å, c = 5.248 ±0.001 Å, ß = 105.06 ±0.03º, α = γ = 90º.
Assuntos
Cristalografia por Raios X/métodos , Diamante/química , Difração de Pó , Pressão , SíncrotronsRESUMO
Synchrotron-source X-ray computerized microtomography (CMT) is evaluated as a method to visualize transport processes. We conclude that CMT is adequate for visualization of transport experiments if the right conditions exist. Namely, 1) not much more than one-order-of-magnitude range in concentration data is needed for the study, 2) the pore space in the samples are greater than approximately 2--50 mum, depending on the sample size and system setup; 3) the sample is fine-grained enough so that a representative elemental volume (REV) can be contained by a 2--10 mm diameter sample, and 4) the transport process is slow enough that significant changes do not occur within the 25--50 min (and possibly less in the future) needed to collect data for one three-dimensional image. Absorption edge difference imaging (AEDI) in association with CMT is introduced as a method to enhance pore-space visualization. We successfully imaged the pore space in a low-porosity granodiorite, diorite and fine-grained granite cores and a higher-porosity soil aggregate sample. We found that the pore space important to transport in the core samples was smaller than what we were able to visualize with CMT. We also made rudimentary associations of minerals with pore-space location.
Assuntos
Minerais/química , Síncrotrons , Tomografia Computadorizada por Raios X/métodos , Absorção , Transporte Biológico , Imageamento Tridimensional , Minerais/análise , Permeabilidade , Porosidade , SoloRESUMO
Soil contains almost twice as much carbon (C) as the atmosphere and 5-15% of soil C is stored in a form of particulate organic matter (POM). Particulate organic matter C is regarded as one of the most labile components of the soil C, such that can be easily lost under right environmental settings. Conceptually, micro-environmental conditions are understood to be responsible for protection of soil C. However, quantitative knowledge of the specific mechanisms driving micro-environmental effects is still lacking. Here we combined CO2 respiration measurements of intact soil samples with X-ray computed micro-tomography imaging and investigated how micro-environmental conditions, represented by soil pores, influence decomposition of POM. We found that atmosphere-connected soil pores influenced soil C's, and especially POM's, decomposition. In presence of such pores losses in POM were 3-15 times higher than in their absence. Moreover, we demonstrated the presence of a feed-forward relationship between soil C decomposition and pore connections that enhance it. Since soil hydrology and soil pores are likely to be affected by future climate changes, our findings indicate that not-accounting for the influence of soil pores can add another sizable source of uncertainty to estimates of future soil C losses.
RESUMO
Physical protection of soil carbon (C) is one of the important components of C storage. However, its exact mechanisms are still not sufficiently lucid. The goal of this study was to explore the influence of soil structure, that is, soil pore spatial arrangements, with and without presence of plant residue on (i) decomposition of added plant residue, (ii) CO2 emission from soil, and (iii) structure of soil bacterial communities. The study consisted of several soil incubation experiments with samples of contrasting pore characteristics with/without plant residue, accompanied by X-ray micro-tomographic analyses of soil pores and by microbial community analysis of amplified 16S-18S rRNA genes via pyrosequencing. We observed that in the samples with substantial presence of air-filled well-connected large (>30 µm) pores, 75-80% of the added plant residue was decomposed, cumulative CO2 emission constituted 1,200 µm C g(-1) soil, and movement of C from decomposing plant residue into adjacent soil was insignificant. In the samples with greater abundance of water-filled small pores, 60% of the added plant residue was decomposed, cumulative CO2 emission constituted 2,000 µm C g(-1) soil, and the movement of residue C into adjacent soil was substantial. In the absence of plant residue the influence of pore characteristics on CO2 emission, that is on decomposition of the native soil organic C, was negligible. The microbial communities on the plant residue in the samples with large pores had more microbial groups known to be cellulose decomposers, that is, Bacteroidetes, Proteobacteria, Actinobacteria, and Firmicutes, while a number of oligotrophic Acidobacteria groups were more abundant on the plant residue from the samples with small pores. This study provides the first experimental evidence that characteristics of soil pores and their air/water flow status determine the phylogenetic composition of the local microbial community and directions and magnitudes of soil C decomposition processes.
Assuntos
Bactérias/classificação , Biodiversidade , Plantas , Microbiologia do Solo , Solo/química , Carbono/química , Folhas de Planta , Plantas/químicaRESUMO
The structural behavior of GeO2 glass has been investigated up to 64 GPa using results from x-ray absorption spectroscopy in a diamond anvil cell combined with previously reported density measurements. The difference between the nearest Ge-O distances of glassy and rutile-type GeO2 disappears at the Ge-O distance maximum at 20 GPa, indicating completion of the tetrahedral-octahedral transition in GeO2 glass. The mean-square displacement σ(2) of the Ge-O distance in the first Ge-O shell increases progressively to a maximum at 10 GPa, followed by a substantial reduction at higher pressures. The octahedral glass is, as expected, less dense and has a higher compressibility than the corresponding crystalline phase, but the differences in Ge-O distance and density between the glass and the crystals are gradually eliminated over the 20-40 GPa pressure range. Above 40 GPa, GeO2 forms a dense octahedral glass with a compressibility similar to that of the corresponding crystalline phase (α-PbO2 type). The EXAFS and XANES spectra show evidence for subtle changes in the dense glass continuing to occur at these high pressures. The Ge-O bond distance shows little change between 45-64 GPa, and this may reflect a balance between bond shortening and a gradual coordination number increase with compression. The density of the glass is similar to that of the α-PbO2-type phase, but the Ge-O distance is longer and is close to that in the higher-coordination pyrite-type phase which is stable above â¼60 GPa. The density data provide evidence for a possible discontinuity and change in compressibility at 40-45 GPa, but there are no major changes in the corresponding EXAFS spectra. A pyrite-type local structural model for the glass can provide a reasonable fitting to the XAFS spectra at 64 GPa.