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1.
Plant Cell Physiol ; 65(5): 708-728, 2024 May 30.
Artigo em Inglês | MEDLINE | ID: mdl-38242160

RESUMO

As sessile organisms, land plants experience various forms of environmental stresses throughout their life span. Therefore, plants have developed extensive and complicated defense mechanisms, including a robust DNA damage response (DDR) and DNA repair systems for maintaining genome integrity. In Arabidopsis, the NAC [NO APICAL MERISTEM (NAM), ARABIDOPSIS TRANSCRIPTION ACTIVATION FACTOR (ATAF), CUP-SHAPED COTYLEDON (CUC)] domain family transcription factor SUPPRESSOR OF GAMMA RESPONSE 1 (SOG1) plays an important role in regulating DDR. Here, we show that SOG1 plays a key role in regulating the repair of salinity-induced DNA double-strand breaks (DSBs) via the homologous recombination (HR) pathway in Arabidopsis. The sog1-1 mutant seedlings display a considerably slower rate of repair of salinity-induced DSBs. Accumulation of SOG1 protein increases in wild-type Arabidopsis under salinity stress, and it enhances the expression of HR pathway-related genes, including RAD51, RAD54 and BReast CAncer gene 1 (BRCA1), respectively, as found in SOG1 overexpression lines. SOG1 binds specifically to the AtRAD54 promoter at the 5'-(N)4GTCAA(N)3C-3' consensus sequence and positively regulates its expression under salinity stress. The phenotypic responses of sog1-1/atrad54 double mutants suggest that SOG1 functions upstream of RAD54, and both these genes are essential in regulating DDR under salinity stress. Furthermore, SOG1 interacts directly with BRCA1, an important component of the HR-mediated DSB repair pathway in plants, where BRCA1 appears to facilitate the binding of SOG1 to the RAD54 promoter. At the genetic level, SOG1 and BRCA1 function interdependently in modulating RAD54 expression under salinity-induced DNA damage. Together, our results suggest that SOG1 regulates the repair of salinity-induced DSBs via the HR-mediated pathway through genetic interactions with RAD54 and BRCA1 in Arabidopsis.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Quebras de DNA de Cadeia Dupla , Reparo do DNA , Regulação da Expressão Gênica de Plantas , Arabidopsis/genética , Arabidopsis/metabolismo , Arabidopsis/fisiologia , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Proteína BRCA1/metabolismo , Proteína BRCA1/genética , DNA Helicases/metabolismo , DNA Helicases/genética , Reparo do DNA/genética , Mutação/genética , Plantas Geneticamente Modificadas , Regiões Promotoras Genéticas/genética , Salinidade , Fatores de Transcrição
2.
J Org Chem ; 89(2): 1010-1017, 2024 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-38183309

RESUMO

A heterobimetallic "Pd-Sn" catalyst, namely, PdCl(PPh3)2SnCl3, efficiently catalyzes the aminocarbonylation reaction of aryl iodides with amines under the atmospheric pressure of CO in the absence of a base and additive. Primary, secondary, and alkyl amines all afforded the corresponding amides in good to excellent yields with high selectivity. A broad range of functional groups were tolerated. The method was further extended to the synthesis of biologically active isoindoline-1,3-diones in the presence of triethylamine. A mechanism is proposed for the reaction.

3.
Org Biomol Chem ; 2024 Jun 26.
Artigo em Inglês | MEDLINE | ID: mdl-38920417

RESUMO

SnCl2 catalyzed the three-component coupling of aniline, epoxide, and paraformaldehyde, resulting in the synthesis of 1,3-oxazolidine derivatives. The reaction is simple and does not require any additives, bases, or oxidants, and proceeds at moderate temperature with good functional group tolerance. The scope of the utilization of paraformaldehyde as the methylene source was further extended to the synthesis of benzothiazole and 4,4'-methylenebis(N,N-dimethylaniline) using the same catalyst. A catalytic pathway was proposed based on the control experiments.

4.
Environ Monit Assess ; 196(7): 631, 2024 Jun 19.
Artigo em Inglês | MEDLINE | ID: mdl-38896350

RESUMO

Human activities have dramatically affected global ecology over the past few decades. Geospatial technologies provide quick, efficient, and quantitative evaluation of spatiotemporal changes in eco-environmental quality (EEQ). This study focuses on a novel approach called remote sensing-based ecological indicators (RSEIs), which has used Landsat imagery data to assess environmental conditions and their changing trends. Four ecological indicators, mainly heatness, dryness, wetness, and greenness, have been used to assess the EEQ in Asansol Municipal Corporation Region (AMCR). Assembling all the indicators to generate RSEI, the principal component analysis (PCA) approach was applied. Our findings show that wetness and greenness favorably impact the province's EEQ, whereas dryness and heat create a negative impact. The RSEI assessment revealed that 24.53 to 28.83% of the area was poor and very poor, whereas the areas with very good decreased from 18.80 to 4.01% from 2001 to 2021 due to urban expansion and industrialization. The relative importance analysis indicates that greenness has a positive relation with RSEI, and dryness and heatness have a negative relation with RSEI. Finally, the receiving operating characteristic (ROC) was used for validation (AUC-0.885) of the RSEI. This study offers valuable insights for ecological management decision-making, guiding planners, and policymakers.


Assuntos
Monitoramento Ambiental , Tecnologia de Sensoriamento Remoto , Monitoramento Ambiental/métodos , Ecologia , Análise de Componente Principal , Conservação dos Recursos Naturais/métodos , Ecossistema , Cidades
5.
Hum Brain Mapp ; 44(8): 3324-3342, 2023 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-36987698

RESUMO

Accurate quantification of cortical engagement during mental imagery tasks remains a challenging brain-imaging problem with immediate relevance to developing brain-computer interfaces. We analyzed magnetoencephalography (MEG) data from 18 individuals completing cued motor imagery, mental arithmetic, and silent word generation tasks. Participants imagined movements of both hands (HANDS) and both feet (FEET), subtracted two numbers (SUB), and silently generated words (WORD). The task-related cortical engagement was inferred from beta band (17-25 Hz) power decrements estimated using a frequency-resolved beamforming method. In the hands and feet motor imagery tasks, beta power consistently decreased in premotor and motor areas. In the word and subtraction tasks, beta-power decrements showed engagements in language and arithmetic processing within the temporal, parietal, and inferior frontal regions. A support vector machine classification of beta power decrements yielded high accuracy rates of 74 and 68% for classifying motor-imagery (HANDS vs. FEET) and cognitive (WORD vs. SUB) tasks, respectively. From the motor-versus-nonmotor contrasts, excellent accuracy rates of 85 and 80% were observed for hands-versus-word and hands-versus-sub, respectively. A multivariate Gaussian-process classifier provided an accuracy rate of 60% for the four-way (HANDS-FEET-WORD-SUB) classification problem. Individual task performance was revealed by within-subject correlations of beta-decrements. Beta-power decrements are helpful metrics for mapping and decoding cortical engagement during mental processes in the absence of sensory stimuli or overt behavioral outputs. Markers derived based on beta decrements may be suitable for rehabilitation purposes, to characterize motor or cognitive impairments, or to treat patients recovering from a cerebral stroke.


Assuntos
Interfaces Cérebro-Computador , Córtex Motor , Humanos , Magnetoencefalografia , Imaginação , Eletroencefalografia/métodos , Imagens, Psicoterapia
6.
Org Biomol Chem ; 21(27): 5601-5608, 2023 Jul 12.
Artigo em Inglês | MEDLINE | ID: mdl-37358390

RESUMO

Herein, we report a heterobimetallic Pd-Sn catalyst for the carbonylative Suzuki coupling, aminocarbonylation reaction, and carbonylative Sonogashira coupling of aryl halides with boronic acids, amines, and aromatic alkynes leading to a three-component coupling reaction using in situ generated carbon monoxide. Under the optimized reaction conditions, a variety of bisaryl ketones, amides, and aromatic ynones have been synthesized in moderate to good yields in a one-pot fashion. The reported catalyst has wide reaction scope with good functional group tolerance.

7.
Plant Cell Physiol ; 63(4): 463-483, 2022 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-35134223

RESUMO

Multiple lines of evidence indicate that solar UV-B light acts as an important environmental signal in plants, regulating various cellular and metabolic activities, gene expression, growth and development. Here, we show that low levels of UV-B (4.0 kJ m-2) significantly influence plant response during early seedling development in the tropical legume crop Vigna radiata (L.) R. Wilczek. Exposure to low doses of UV-B showed relatively less growth inhibition yet remarkably enhanced lateral root formation in seedlings. Both low and high (8.0 kJ m-2) doses of UV-B treatment induced DNA double-strand breaks and activated the SOG1-related ATM-ATR-mediated DNA damage response pathway. These effects led to G2-M-phase arrest with a compromised expression of the key cell cycle regulators, including CDKB1;1, CDKB2;1 and CYCB1;1, respectively. However, along with these effects, imbibitional exposure of seeds to a low UV-B dose resulted in enhanced accumulation of FZR1/CCS52A, E2Fa and WEE1 kinase and prominent induction of endoreduplication in 7-day-old seedlings. Low dose of UV-B mediated phenotypical responses, while the onset of endoreduplication appeared to be regulated at least in part via UV-B induced reactive oxygen species accumulation. Transcriptome analyses further revealed a network of co-regulated genes associated with DNA repair, cell cycle regulation and oxidative stress response pathways that are activated upon exposure to low doses of UV-B.


Assuntos
Endorreduplicação , Vigna , DNA/farmacologia , Quebras de DNA de Cadeia Dupla , Dano ao DNA , Plântula , Vigna/genética
8.
Biochem Biophys Res Commun ; 515(4): 531-537, 2019 08 06.
Artigo em Inglês | MEDLINE | ID: mdl-31176488

RESUMO

The present study describes the biophysical characterization of Arabidopsis thaliana SOG1 (SUPPRESSOR OF GAMMA RESPONSE 1) protein, a NAC domain transcription factor which plays central role in DNA damage response pathway, under salinity stress in vitro. Tryptophan fluorescence studies using purified recombinant wild type (full length) AtSOG1 and its N-terminal or C-terminal deletion forms (AtSOG1ΔNAC and AtSOG1ΔCT respectively) have revealed high salinity induced conformational change due to removal of the N-terminal NAC domain. Bis-ANS binding assays indicate that removal of the N-terminal NAC domain increases the surface hydrophobic binding sites, while the C-terminal region of SOG1 also plays important role in regulating the surface hydrophobicity aspects following exposure to high salinity. Circular dichroism (CD) spectral studies have indicated that removal of the N-terminal NAC domain affects the structural conformation of the protein under high salt concentration. Urea-induced equilibrium unfolding studies revealed decreased stability of C-terminal region due to removal of the N-terminal NAC domain. In vitro aggregation studies have indicated higher propensity of aggregation of AtSOG1ΔNAC due to salt treatment. Overall, our results provide evidence for the importance of both N-terminal NAC domain and the C-terminal region in regulating the stability of SOG1 protein under salinity stress in vitro.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Estresse Salino , Fatores de Transcrição/metabolismo , Sítios de Ligação , Dicroísmo Circular , Dano ao DNA , DNA de Plantas/genética , Deleção de Genes , Regulação da Expressão Gênica de Plantas , Luz , Ligação Proteica , Domínios Proteicos , Dobramento de Proteína , Proteínas Recombinantes/metabolismo , Espalhamento de Radiação , Propriedades de Superfície , Triptofano/química , Ureia/química
10.
Adv Exp Med Biol ; 996: 207-219, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-29124702

RESUMO

Gradual depletion of the atmospheric ozone layer during the past few years has increased the incidence of solar UV radiation specifically the UV-C on earth's surface is one of the major environmental concerns because of the harmful effects of this radiation in all forms of life. The solar UV radiation including the harmful wavelength range of UV-B (280-320 nm) represents a significant climatic stress for both animals and plants, causing damage to the fundamental biomolecules such as DNA, proteins and lipids, thus activating genotoxic stress and induces genome instability. When DNA absorbs UV-B light, energy from the photon causes covalent linkages to form between adjacent pyrimidine bases, creating photoproducts, primarily cyclobutane pyrimidine dimers (CPDs) and pyrimidine-6,4-pyrimidinone photoproduct (6,4PPs). Pyrimidine dimers create distortions in the DNA strands and therefore can inhibit DNA replication as well transcription. Lack of efficient repair of UV-induced DNA damage may induce the formation of DNA double stand breaks (DSBs), one of the serious forms of damage in DNA double helix, as well as oxidative damage. Unrepaired DSBs in the actively dividing somatic cells severely affect cell growth and development, finally results in loss of cell viability and development of various diseases, such as cancer in man.This chapter mainly highlights the incidence of solar UV-radiation on earth's surface along with the formation of major types of UV-induced DNA damage and the associated repair mechanisms as well as methods of detecting DNA damage and finally our present understanding on the impact on solar UV radiation on human health.


Assuntos
Dano ao DNA , Reparo do DNA/efeitos da radiação , Genoma Humano/efeitos da radiação , Instabilidade Genômica/efeitos da radiação , Nível de Saúde , Luz Solar/efeitos adversos , Raios Ultravioleta/efeitos adversos , Genótipo , Humanos , Neoplasias Induzidas por Radiação/epidemiologia , Neoplasias Induzidas por Radiação/genética , Fenótipo , Fatores de Risco
11.
Chem Soc Rev ; 44(11): 3666-90, 2015 Jun 07.
Artigo em Inglês | MEDLINE | ID: mdl-25898943

RESUMO

Heterobimetallic catalysts, bearing a metal-metal bond between a transition metal (TM) and a tin atom, are very promising due to their ability in mediating a wide variety of organic transformations. Indeed the utilization of such catalysts is a challenging and evolving area in the field of homogeneous catalysis. Catalysis across a 'TM-Sn' motif is an emerging area in the broader domain of multimetallic catalysis. The present review apprises the chemists' community of the past, present and future scope of this versatile catalytic motif. The TM-Sn catalyzed reactions presented include, among others, Friedel-Crafts alkylation, carbonylation, polymerization, cyclization, olefin metathesis, Heck coupling, hydroarylation Michael addition and tandem coupling. The mechanistic aspects of the reactions have been highlighted as well.

12.
Plant Physiol ; 162(2): 1195-210, 2013 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-23660835

RESUMO

DNA polymerase λ (Pol λ) is the sole member of family X DNA polymerase in plants and plays a crucial role in nuclear DNA damage repair. Here, we report the transcriptional up-regulation of Arabidopsis (Arabidopsis thaliana) AtPolλ in response to abiotic and genotoxic stress, including salinity and the DNA cross-linking agent mitomycin C (MMC). The increased sensitivity of atpolλ knockout mutants toward high salinity and MMC treatments, with higher levels of accumulation of double strand breaks (DSBs) than wild-type plants and delayed repair of DSBs, has suggested the requirement of Pol λ in DSB repair in plants. AtPolλ overexpression moderately complemented the deficiency of DSB repair capacity in atpolλ mutants. Transcriptional up-regulation of major nonhomologous end joining (NHEJ) pathway genes KU80, X-RAY CROSS COMPLEMENTATION PROTEIN4 (XRCC4), and DNA Ligase4 (Lig4) along with AtPolλ in Arabidopsis seedlings, and the increased sensitivity of atpolλ-2/atxrcc4 and atpolλ-2/atlig4 double mutants toward high salinity and MMC treatments, indicated the involvement of NHEJ-mediated repair of salinity- and MMC-induced DSBs. The suppressed expression of NHEJ genes in atpolλ mutants suggested complex transcriptional regulation of NHEJ genes. Pol λ interacted directly with XRCC4 and Lig4 via its N-terminal breast cancer-associated C terminus (BRCT) domain in a yeast two-hybrid system, while increased sensitivity of BRCT-deficient Pol λ-expressing transgenic atpolλ-2 mutants toward genotoxins indicated the importance of the BRCT domain of AtPolλ in mediating the interactions for processing DSBs. Our findings provide evidence for the direct involvement of DNA Pol λ in the repair of DSBs in a plant genome.


Assuntos
Proteínas de Arabidopsis/metabolismo , Arabidopsis/genética , Quebras de DNA de Cadeia Dupla , DNA Polimerase beta/metabolismo , Reparo do DNA , DNA Polimerase Dirigida por DNA/metabolismo , Arabidopsis/efeitos dos fármacos , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Reagentes de Ligações Cruzadas/química , Reagentes de Ligações Cruzadas/farmacologia , Dano ao DNA , Reparo do DNA por Junção de Extremidades , DNA Ligases/genética , DNA Ligases/metabolismo , DNA Polimerase beta/genética , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/metabolismo , DNA Polimerase Dirigida por DNA/genética , Regulação da Expressão Gênica de Plantas , Genoma de Planta , Meristema/metabolismo , Mitomicina/farmacologia , Mutação , Plantas Geneticamente Modificadas , Salinidade , Plântula/efeitos dos fármacos , Plântula/genética , Plântula/metabolismo
13.
Plant Physiol Biochem ; 211: 108698, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38714132

RESUMO

Plants accumulate flavonoids as part of UV-B acclimation, while a high level of UV-B irradiation induces DNA damage and leads to genome instability. Here, we show that MYB4, a member of the R2R3-subfamily of MYB transcription factor plays important role in regulating plant response to UV-B exposure through the direct repression of the key genes involved in flavonoids biosynthesis and repair of DNA double-strand breaks (DSBs). Our results demonstrate that MYB4 inhibits seed germination and seedling establishment in Arabidopsis following UV-B exposure. Phenotype analyses of atmyb4-1 single mutant line along with uvr8-6/atmyb4-1, cop1-6/atmyb4-1, and hy5-215/atmyb4-1 double mutants indicate that MYB4 functions downstream of UVR8 mediated signaling pathway and negatively affects UV-B acclimation and cotyledon expansion. Our results indicate that MYB4 acts as transcriptional repressor of two key flavonoid biosynthesis genes, including 4CL and FLS, via directly binding to their promoter, thus reducing flavonoid accumulation. On the other hand, AtMYB4 overexpression leads to higher accumulation level of DSBs along with repressed expression of several key DSB repair genes, including AtATM, AtKU70, AtLIG4, AtXRCC4, AtBRCA1, AtSOG1, AtRAD51, and AtRAD54, respectively. Our results further suggest that MYB4 protein represses the expression of two crucial DSB repair genes, AtKU70 and AtXRCC4 through direct binding with their promoters. Together, our results indicate that MYB4 functions as an important coordinator to regulate plant response to UV-B through transcriptional regulation of key genes involved in flavonoids biosynthesis and repair of UV-B induced DNA damage.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Quebras de DNA de Cadeia Dupla , Reparo do DNA , Flavonoides , Regulação da Expressão Gênica de Plantas , Fatores de Transcrição , Raios Ultravioleta , Arabidopsis/genética , Arabidopsis/efeitos da radiação , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Flavonoides/biossíntese , Flavonoides/metabolismo , Fatores de Transcrição/metabolismo , Fatores de Transcrição/genética , Quebras de DNA de Cadeia Dupla/efeitos da radiação , Regulação da Expressão Gênica de Plantas/efeitos da radiação , Proteínas Repressoras
14.
Data Brief ; 54: 110491, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38774245

RESUMO

Understanding and predicting CO2 emissions from individual power plants is crucial for developing effective mitigation strategies. This study analyzes and forecasts CO2 emissions from an engine-based natural gas-fired power plant in Dhaka Export Processing Zone (DEPZ), Bangladesh. This study also presents a rich dataset and ELM-based prediction model for a natural gas-fired plant in Bangladesh. Utilizing a rich dataset of Electricity generation and Gas Consumption, CO2 emissions in tons are estimated based on the measured energy use, and the ELM models were trained on CO2 emissions data from January 2015 to December 2022 and used to forecast CO2 emissions until December 2026. This study aims to improve the understanding and prediction of CO2 emissions from natural gas-fired power plants. While the specific operational strategy of the studied plant is not available, the provided data can serve as a valuable baseline or benchmark for comparison with similar facilities and the development of future research on optimizing operations and CO2 mitigation strategies. The Extreme Learning Machine (ELM) modeling method was employed due to its efficiency and accuracy in prediction. The ELM models achieved performance metrics Root Mean Square Error (RMSE), Mean Absolute Error (MAE), and Mean Absolute Scaled Error (MASE), values respectively 3494.46 (<5000), 2013.42 (<2500), and 0.93 close to 1, which falls within the acceptable range. Although natural gas is a cleaner alternative, emission reduction remains essential. This data-driven approach using a Bangladeshi case study provides a replicable framework for optimizing plant operations and measuring and forecasting CO2 emissions from similar facilities, contributing to global climate change.

15.
Artigo em Inglês | MEDLINE | ID: mdl-38568312

RESUMO

Floods cause substantial losses to life and property, especially in flood-prone regions like northwestern Bangladesh. Timely and precise evaluation of flood impacts is critical for effective flood management and decision-making. This research demonstrates an integrated approach utilizing machine learning and Google Earth Engine to enable real-time flood assessment. Synthetic aperture radar (SAR) data from Sentinel-1 and the Google Earth Engine platform were employed to generate near real-time flood maps of the 2020 flood in Kurigram and Lalmonirhat. An automatic thresholding technique quantified flooded areas. For land use/land cover (LULC) analysis, Sentinel-2's high resolution and machine learning models like artificial neural networks (ANN), random forests (RF) and support vector machines (SVM) were leveraged. ANN delivered the best LULC mapping with 0.94 accuracy based on metrics like accuracy, kappa, mean F1 score, mean sensitivity, mean specificity, mean positive predictive value, mean negative value, mean precision, mean recall, mean detection rate and mean balanced accuracy. Results showed over 600,000 people exposed at peak inundation in July-about 17% of the population. The machine learning-enabled LULC maps reliably identified vulnerable areas to prioritize flood management. Over half of croplands flooded in July. This research demonstrates the potential of integrating SAR, machine learning and cloud computing to empower authorities through real-time monitoring and accurate LULC mapping essential for effective flood response. The proposed comprehensive methodology can assist stakeholders in developing data-driven flood management strategies to reduce impacts.

16.
Sci Rep ; 14(1): 566, 2024 01 04.
Artigo em Inglês | MEDLINE | ID: mdl-38177219

RESUMO

Droughts pose a severe environmental risk in countries that rely heavily on agriculture, resulting in heightened levels of concern regarding food security and livelihood enhancement. Bangladesh is highly susceptible to environmental hazards, with droughts further exacerbating the precarious situation for its 170 million inhabitants. Therefore, we are endeavouring to highlight the identification of the relative importance of climatic attributes and the estimation of the seasonal intensity and frequency of droughts in Bangladesh. With a period of forty years (1981-2020) of weather data, sophisticated machine learning (ML) methods were employed to classify 35 agroclimatic regions into dry or wet conditions using nine weather parameters, as determined by the Standardized Precipitation Evapotranspiration Index (SPEI). Out of 24 ML algorithms, the four best ML methods, ranger, bagEarth, support vector machine, and random forest (RF) have been identified for the prediction of multi-scale drought indices. The RF classifier and the Boruta algorithms shows that water balance, precipitation, maximum and minimum temperature have a higher influence on drought intensity and occurrence across Bangladesh. The trend of spatio-temporal analysis indicates, drought intensity has decreased over time, but return time has increased. There was significant variation in changing the spatial nature of drought intensity. Spatially, the drought intensity shifted from the northern to central and southern zones of Bangladesh, which had an adverse impact on crop production and the livelihood of rural and urban households. So, this precise study has important implications for the understanding of drought prediction and how to best mitigate its impacts. Additionally, the study emphasizes the need for better collaboration between relevant stakeholders, such as policymakers, researchers, communities, and local actors, to develop effective adaptation strategies and increase monitoring of weather conditions for the meticulous management of droughts in Bangladesh.


Assuntos
Secas , Tempo (Meteorologia) , Estações do Ano , Bangladesh , Algoritmos , Mudança Climática
17.
J Org Chem ; 78(6): 2430-42, 2013 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-23425249

RESUMO

An efficient Michael addition reaction of differently substituted enones with carbon, sulfur, oxygen, and nitrogen nucleophiles has been achieved by a new heterobimetallic "Pd-Sn" catalyst system. The nature of the catalytically relevant species and their interactions with the enone moiety has been examined by spectroscopy. The effect of ligand and the coordination mode of enone with "Pd-Sn" heterobimetallic system have been investigated by kinetics and DFT studies. A straightforward application of this methodology is shown in the synthesis of 1,4-oxathiepane core.

18.
Plant Growth Regul ; 100(2): 355-371, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-36686885

RESUMO

Micronutrients are essential mineral elements required for both plant and human development.An integrated system involving soil, climatic conditions, and types of crop plants determines the level of micronutrient acquisition and utilization. Most of the staple food crops consumed globally predominantly include the cereal grains, tubers and roots, respectively and in many cases, particularly in the resource-poor countries they are grown in nutrient-deficient soils. These situations frequently lead to micronutrient deficiency in crops. Moreover, crop plants with micronutrient deficiency also show high level of susceptibility to various abiotic and biotic stress factors. Apart from this, climate change and soil pollution severely affect the accumulation of micronutrients, such as zinc (Zn), iron (Fe), selenium (Se), manganese (Mn), and copper (Cu) in food crops. Therefore, overcoming the issue of micronutrient deficiency in staple crops and to achieve the adequate level of food production with enriched nutrient value is one of the major global challenges at present. Conventional breeding approaches are not adequate to feed the increasing global population with nutrient-rich staple food crops. To address these issues, alongside traditional approaches, genetic modification strategies have been adopted during the past couple of years in order to enhance the transport, production, enrichment and bioavailability of micronutrients in staple crops. Recent advances in agricultural biotechnology and genome editing approaches have shown promising response in the development of micronutrient enriched biofortified crops. This review highlights the current advancement of our knowledge on the possible implications of various biotechnological tools for the enrichment and enhancement of bioavailability of micronutrients in crops.

19.
Planta ; 236(2): 491-511, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22419220

RESUMO

1-Aminocyclopropane-1-carboxylic acid synthase (ACS) catalyzes the rate-limiting step in ethylene biosynthesis during ripening. ACS isozymes are regulated both transcriptionally and post-translationally. However, in banana, an important climacteric fruit, little is known about post-translational regulation of ACS. Here, we report the post-translational modification of MA-ACS1 (Musa acuminata ACS1), a ripening inducible isozyme in the ACS family, which plays a key role in ethylene biosynthesis during banana fruit ripening. Immunoprecipitation analyses of phospholabeled protein extracts from banana fruit using affinity-purified anti-MA-ACS1 antibody have revealed phosphorylation of MA-ACS1, particularly in ripe fruit tissue. We have identified the induction of a 41-kDa protein kinase activity in pulp at the onset of ripening. The 41-kDa protein kinase has been identified as a putative protein kinase by MALDI-TOF/MS analysis. Biochemical analyses using partially purified protein kinase fraction from banana fruit have identified the protein kinase as a Ser/Thr family of protein kinase and its possible involvement in MA-ACS1 phosphorylation during ripening. In vitro phosphorylation analyses using synthetic peptides and site-directed mutagenized recombinant MA-ACS1 have revealed that serine 476 and 479 residues at the C-terminal region of MA-ACS1 are phosphorylated. Overall, this study provides important novel evidence for in vivo phosphorylation of MA-ACS1 at the molecular level as a possible mechanism of post-translational regulation of this key regulatory protein in ethylene signaling pathway in banana fruit during ripening.


Assuntos
Liases/metabolismo , Musa/enzimologia , Processamento de Proteína Pós-Traducional/fisiologia , Sequência de Aminoácidos , Aminoácidos Cíclicos/metabolismo , Animais , Etilenos/metabolismo , Frutas/enzimologia , Frutas/genética , Frutas/fisiologia , Regulação Enzimológica da Expressão Gênica/fisiologia , Regulação da Expressão Gênica de Plantas/fisiologia , Imunoglobulina G , Liases/genética , Liases/isolamento & purificação , Dados de Sequência Molecular , Musa/genética , Musa/fisiologia , Mutagênese Sítio-Dirigida , Fosfoaminoácidos/análise , Fosforilação , Proteínas de Plantas/genética , Proteínas de Plantas/isolamento & purificação , Proteínas de Plantas/metabolismo , Coelhos , Proteínas Recombinantes/metabolismo , Alinhamento de Sequência , Deleção de Sequência , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz
20.
Planta ; 235(2): 411-32, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-21947619

RESUMO

Genetic and molecular analyses mainly in Arabidopsis and in some other plants have demonstrated involvement of light signaling in cell cycle regulation. In this report, we show light-mediated activation of the promoter of AtPolλ gene, a homolog of mammalian DNA polymerase λ in Arabidopsis thaliana and an important component of DNA damage repair/recombination machinery in plants. Analyses of the light-mediated promoter activity using various deletion versions of AtPolλ promoter in transformed Arabidopsis and tobacco (Nicotiana tabaccum) plants indicate that a 130-bp promoter region between -536 and -408 of AtPolλ promoter is essential for light-induced regulation of AtPolλ expression. DNA-protein interaction studies reveal that an ATCT-motif and AE-box light-responsive elements in the light-regulated promoter region confer light responsiveness of AtPolλ promoter. DNA-binding analysis has identified a 63-kDa trans-acting protein factor which showed specific binding to ATCT-motif, while another trans-acting factor of ~52 kDa was found to bind specifically to both ATCT and AE-box sequences. The 52-kDa protein has been identified as B3-domain transcription factor by MALDI-TOF/MS analysis. Overall, our results provide novel information on the role of light signaling in regulation of expression of an important component of DNA repair machinery in plants.


Assuntos
Arabidopsis/efeitos da radiação , DNA Polimerase beta/metabolismo , Reparo do DNA , Luz , Regiões Promotoras Genéticas , Sequência de Aminoácidos , Arabidopsis/enzimologia , Arabidopsis/genética , Arabidopsis/crescimento & desenvolvimento , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Sequência de Bases , Clonagem Molecular , Biologia Computacional , Cotilédone/genética , Cotilédone/metabolismo , DNA Polimerase beta/genética , DNA de Plantas/genética , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/metabolismo , Ensaio de Desvio de Mobilidade Eletroforética , Regulação da Expressão Gênica de Plantas , Genes de Plantas , Genes Reporter , Dados de Sequência Molecular , Motivos de Nucleotídeos , Extratos Vegetais/genética , Extratos Vegetais/metabolismo , Plantas Geneticamente Modificadas/enzimologia , Plantas Geneticamente Modificadas/genética , Plantas Geneticamente Modificadas/crescimento & desenvolvimento , Plantas Geneticamente Modificadas/metabolismo , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Nicotiana/genética , Nicotiana/metabolismo
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