Radiation Reaction Cooling as a Source of Anisotropic Momentum Distributions with Inverted Populations.

Under the presence of strong electromagnetic fields and radiation reaction, plasmas develop anisotropic momentum distributions, characterized by a population inversion. This is a general property of collisionless plasmas when the radiation reaction force is taken into account. We study the case of a plasma in a strong magnetic field and demonstrate the development of ring momentum distributions. The timescales for ring formation are derived for this configuration. The analytical results for the ring properties and the timescales for ring formation are confirmed with particle-in-cell simulations. The resulting momentum distributions are kinetically unstable and are known to lead to coherent radiation emission in astrophysical plasmas and laboratory setups.

Genetic parameters for traditional and novel ultrasound carcass traits in Nellore cattle.

The objective of this study was to contribute to genetic improvement for carcass quality in Nellore cattle by estimating genetic parameters for carcass characteristics measured by traditional and novel ultrasound adjusted for body weight. Records of 19,910 Nellore breed animals born between 2001 and 2015 as part of a genetic improvement program were evaluated for this purpose. The (co)variance components and genetic parameters for yearling weight (YW), slaughter conformation at yearling age (SCY), ribeye area (REA), REA adjusted for 100 kg of body weight (REA100), REA adjusted for 450 kg of body weight (REA450), subcutaneous fat thickness over the loin (SFTL) and the rump (SFTR), intramuscular fat (IF), and height × width ratio of the sirloin steak (RATIO) were estimated using the restricted maximum likelihood (REML) method and the three-trait animal model. The estimated heritability values were 0.39 (YW), 0.33 (SCY), 0.31 (REA), 0.42 (REA100), 0.38 (REA450), 0.31 (RATIO), 0.17 (SFTL), 0.27 (SFTR), and 0.41 (MAR). The genetic correlations between REA and YW (0.43) and SCY and YW (0.78), respectively, suggested that selecting for REA or SCY could result in an increase in body weight. Because of its moderate and negative correlation with YW, REA100 was ineffective as a muscling indicator (- 0.38). The indicators REA450 and RATIO had a - 0.12 and 0.11 low correlation with YW, respectively. Thus, it is concluded that REA450 and RATIO were the best indicators of muscling, with heritability of medium magnitude, making the selection viable, as well as having a low correlation with body weight.

Collisionless shock acceleration in the corona of an inertial confinement fusion pellet with possible application to ion fast ignition.

Two-dimensional particle-in-cell simulations are used to explore collisionless shock acceleration in the corona plasma surrounding the compressed core of an inertial confinement fusion pellet. We show that an intense laser pulse interacting with the long scale-length plasma corona is able to launch a collisionless shock around the critical density. The nonlinear wave travels up-ramp through the plasma reflecting and accelerating the background ions. Our results suggest that protons with characteristics suitable for ion fast ignition may be achieved in this way. This article is part of a discussion meeting issue 'Prospects for high gain inertial fusion energy (part 2)'.

Plasma Wakes Driven by Photon Bursts via Compton Scattering.

Photon bursts with a wavelength smaller than the plasma interparticle distance can drive plasma wakes via Compton scattering. We investigate this fundamental process analytically and numerically for different photon frequencies, photon flux, and plasma magnetization. Our results show that Langmuir and extraordinary modes are driven efficiently when the photon energy density lies above a certain threshold. The interaction of photon bursts with magnetized plasmas is of distinguished interest as the generated extraordinary modes can convert into pure electromagnetic waves at the plasma-vacuum boundary. This could possibly be a mechanism for the generation of radio waves in astrophysical scenarios in the presence of intense sources of high energy photons.

Prospect of Studying Nonperturbative QED with Beam-Beam Collisions.

We demonstrate the experimental feasibility of probing the fully nonperturbative regime of quantum electrodynamics with a 100 GeV-class particle collider. By using tightly compressed and focused electron beams, beamstrahlung radiation losses can be mitigated, allowing the particles to experience extreme electromagnetic fields. Three-dimensional particle-in-cell simulations confirm the viability of this approach. The experimental forefront envisaged has the potential to establish a novel research field and to stimulate the development of a new theoretical methodology for this yet unexplored regime of strong-field quantum electrodynamics.

High Orbital Angular Momentum Harmonic Generation.

We identify and explore a high orbital angular momentum (OAM) harmonics generation and amplification mechanism that manipulates the OAM independently of any other laser property, by preserving the initial laser wavelength, through stimulated Raman backscattering in a plasma. The high OAM harmonics spectra can extend at least up to the limiting value imposed by the paraxial approximation. We show with theory and particle-in-cell simulations that the orders of the OAM harmonics can be tuned according to a selection rule that depends on the initial OAM of the interacting waves. We illustrate the high OAM harmonics generation in a plasma using several examples including the generation of prime OAM harmonics. The process can also be realized in any nonlinear optical Kerr media supporting three-wave interactions.

Physical Mechanism of the Transverse Instability in Radiation Pressure Ion Acceleration.

The transverse stability of the target is crucial for obtaining high quality ion beams using the laser radiation pressure acceleration (RPA) mechanism. In this Letter, a theoretical model and supporting two-dimensional (2D) particle-in-cell (PIC) simulations are presented to clarify the physical mechanism of the transverse instability observed in the RPA process. It is shown that the density ripples of the target foil are mainly induced by the coupling between the transverse oscillating electrons and the quasistatic ions, a mechanism similar to the oscillating two stream instability in the inertial confinement fusion research. The predictions of the mode structure and the growth rates from the theory agree well with the results obtained from the PIC simulations in various regimes, indicating the model contains the essence of the underlying physics of the transverse breakup of the target.

Genetic correlations between visual slaughter conformation scores and growth and reproductive traits in Canchim cattle.

We obtained heritability and (co)variance component estimates for slaughter conformation scores at 420 days of age (SCS420), age at calving (first, AFC; second, ASC), calving occurrence until 38 months of age (CP38), weight at 420 days of age (W420), and scrotal circumference at 420 days (SC420) in Canchim (5/8 Charolais + 3/8 Zebu) cattle. A total of 23,168 records of Canchim animals, including 12,493 females and 10,675 males, were analyzed. SCS420 indicated carcass structure, muscle development, and subcutaneous fat deposition. The slaughter conformation score of each animal was relative to the whole contemporary group; 1 corresponded to the lowest expression of the trait and 6 to the highest. Heritabilities, and genetic and residual correlation estimates between SCS420 and reproductive and weight traits, were estimated by multitrait analyses using an animal model with Bayesian inference, employing a linear model for AFC, ASC, SC420, and W420 and a threshold model for CP38 and SCS420. Heritability estimates for SCS420, AFC, ASC, CP38, W420, and SC420 were 0.11, 0.15, 0.15, 0.15, 0.30, and 0.30, respectively. Genetic correlation estimates between SCS420 and the other traits were 0.08 (AFC), 0.58 (ASC), 0.08 (CP38), 0.43 (W420), and 0.17 (SC420). Visual slaughter conformation scores respond to individual selection and can be used as selection criteria in Canchim cattle. Selection to improve sexual precocity would not be effective in improving carcass conformation and composition, and selection for animals with high breeding values for yearling weight may improve slaughter conformation at the yearling stage.

Inbreeding depression in Zebu cattle traits.

The productivity of herds may be negatively affected by inbreeding depression, and it is important to know how intense is this effect on the livestock performance. We performed a comprehensive analysis involving five Zebu breeds reared in Brazil to estimate inbreeding depression in productive and reproductive traits. Inbreeding depression was estimated for 13 traits by including the individual inbreeding rate as a linear covariate in the standard genetic evaluation models. For all breeds and for almost all traits (no effect was observed on gestation length), the performance of the animals was compromised by an increase in inbreeding. The average inbreeding depression was -0.222% and -0.859% per 1% of inbreeding for linear regression coefficients scaled on the percentage of mean (ßm ) and standard deviation (ßσ ), respectively. The means for ßm (and ßσ ) were -0.269% (-1.202%) for weight/growth traits and -0.174% (-0.546%) for reproductive traits. Hence, inbreeding depression is more pronounced in weight/growth traits than in reproductive traits. These findings highlight the need for the management of inbreeding in the respective breeding programmes of the breeds studied here.

Repeatability and genotypic correlations of reproductive and productive traits of crossbred beef cattle dams.

Beef cattle production requires reproductive efficiency. However, measures of reproductive traits are not usually collected; consequently, correlated traits that could be used as indicators would be useful. We examined associations between measures of reproductive and productive efficiency that could be used as selection indicators. Data from 194 dams of the genetic groups Angus x Nelore, Caracu x Nelore, and Valdostana x Nelore collected over 4 years were used. The reproductive traits analyzed were days to heat (DH), calving interval (CI), days to calving (DC), and pregnancy rate (PR). The productive traits were dam weight (DW), body condition score (BCS), calf weight (CW), and weaning rate (WR). The effects on the model were: year, genetic group, reproductive status (RS), age, reproductive rest, and breed of bull (CW and WR). Multivariate analyses were performed, using the Bayesian approach via Gibbs sampling. We conclude that the reproductive measures are ineffective as selection indicators, whereas using dam weight may be a good alternative.

Electromagnetic field generation in the downstream of electrostatic shocks due to electron trapping.

A new magnetic field generation mechanism in electrostatic shocks is found, which can produce fields with magnetic energy density as high as 0.01 of the kinetic energy density of the flows on time scales ∼10(4)ωpe-1. Electron trapping during the shock formation process creates a strong temperature anisotropy in the distribution function, giving rise to the pure Weibel instability. The generated magnetic field is well confined to the downstream region of the electrostatic shock. The shock formation process is not modified, and the features of the shock front responsible for ion acceleration, which are currently probed in laser-plasma laboratory experiments, are maintained. However, such a strong magnetic field determines the particle trajectories downstream and has the potential to modify the signatures of the collisionless shock.

Magnetic-field generation and amplification in an expanding plasma.

Particle-in-cell simulations are used to investigate the formation of magnetic fields B in plasmas with perpendicular electron density and temperature gradients. For system sizes L comparable to the ion skin depth d(i), it is shown that B ∼ d(i)/L, consistent with the Biermann battery effect. However, for large L/d(i), it is found that the Weibel instability (due to electron temperature anisotropy) supersedes the Biermann battery as the main producer of B. The Weibel-produced fields saturate at a finite amplitude (plasma ß ≈ 100), independent of L. The magnetic energy spectra below the electron Larmor radius scale are well fitted by the power law with slope -16/3, as predicted by Schekochihin et al. [Astrophys. J. Suppl. Ser. 182, 310 (2009)].

All-optical radiation reaction at 10²¹ W/cm².

Using full-scale 3D particle-in-cell simulations we show that the radiation reaction dominated regime can be reached in an all-optical configuration through the collision of a ~1 GeV laser wakefield accelerated electron bunch with a counterpropagating laser pulse. In this configuration the radiation reaction significantly reduces the energy of the particle bunch, thus providing clear experimental signatures for the process with currently available lasers. We also show that the transition between the classical and quantum radiation reaction could be investigated in the same configuration with laser intensities of 10²³ W/cm².

A genome-wide scan for selection signatures in Nellore cattle.

Brazilian Nellore cattle (Bos indicus) have been selected for growth traits for over more than four decades. In recent years, reproductive and meat quality traits have become more important because of increasing consumption, exports and consumer demand. The identification of genome regions altered by artificial selection can potentially permit a better understanding of the biology of specific phenotypes that are useful for the development of tools designed to increase selection efficiency. Therefore, the aims of this study were to detect evidence of recent selection signatures in Nellore cattle using extended haplotype homozygosity methodology and BovineHD marker genotypes (>777,000 single nucleotide polymorphisms) as well as to identify corresponding genes underlying these signals. Thirty-one significant regions (P < 0.0001) of possible recent selection signatures were detected, and 19 of these overlapped quantitative trait loci related to reproductive traits, growth, feed efficiency, meat quality, fatty acid profiles and immunity. In addition, 545 genes were identified in regions harboring selection signatures. Within this group, 58 genes were associated with growth, muscle and adipose tissue metabolism, reproductive traits or the immune system. Using relative extended haplotype homozygosity to analyze high-density single nucleotide polymorphism marker data allowed for the identification of regions potentially under artificial selection pressure in the Nellore genome, which might be used to better understand autozygosity and the effects of selection on the Nellore genome.

Laboratory realization of relativistic pair-plasma beams.

Relativistic electron-positron plasmas are ubiquitous in extreme astrophysical environments such as black-hole and neutron-star magnetospheres, where accretion-powered jets and pulsar winds are expected to be enriched with electron-positron pairs. Their role in the dynamics of such environments is in many cases believed to be fundamental, but their behavior differs significantly from typical electron-ion plasmas due to the matter-antimatter symmetry of the charged components. So far, our experimental inability to produce large yields of positrons in quasi-neutral beams has restricted the understanding of electron-positron pair plasmas to simple numerical and analytical studies, which are rather limited. We present the first experimental results confirming the generation of high-density, quasi-neutral, relativistic electron-positron pair beams using the 440 GeV/c beam at CERN's Super Proton Synchrotron (SPS) accelerator. Monte Carlo simulations agree well with the experimental data and show that the characteristic scales necessary for collective plasma behavior, such as the Debye length and the collisionless skin depth, are exceeded by the measured size of the produced pair beams. Our work opens up the possibility of directly probing the microphysics of pair plasmas beyond quasi-linear evolution into regimes that are challenging to simulate or measure via astronomical observations.

Genome scan for meat quality traits in Nelore beef cattle.

Meat quality traits are economically important because they affect consumers' acceptance, which, in turn, influences the demand for beef. However, selection to improve meat quality is limited by the small numbers of animals on which meat tenderness can be evaluated due to the cost of performing shear force analysis and the resultant damage to the carcass. Genome wide-association studies for Warner-Bratzler shear force measured at different times of meat aging, backfat thickness, ribeye muscle area, scanning parameters [lightness, redness (a*), and yellowness] to ascertain color characteristics of meat and fat, water-holding capacity, cooking loss (CL), and muscle pH were conducted using genotype data from the Illumina BovineHD BeadChip array to identify quantitative trait loci (QTL) in all phenotyped Nelore cattle. Phenotype count for these animals ranged from 430 to 536 across traits. Meat quality traits in Nelore are controlled by numerous QTL of small effect, except for a small number of large-effect QTL identified for a*fat, CL, and pH. Genomic regions harboring these QTL and the pathways in which the genes from these regions act appear to differ from those identified in taurine cattle for meat quality traits. These results will guide future QTL mapping studies and the development of models for the prediction of genetic merit to implement genomic selection for meat quality in Nelore cattle.

dc-Magnetic-field generation in unmagnetized shear flows.

The generation of dc magnetic fields in unmagnetized electron-ion shear flows is shown to be associated to either initial thermal effects or the onset of electron-scale shear instabilities, in particular the cold Kelvin-Helmholtz instability. This mechanism, intrinsic to shear gradients on the electron scale, is described through a kinetic model that predicts the growth and the saturation of the dc field in both scenarios. The theoretical results are confirmed by multidimensional particle-in-cell simulations, demonstrating the formation of long-lived magnetic fields (t~100's ω(pi)(-1)) along the full longitudinal extent of the shear layer, with a typical transverse width of √[γ(0)]c/ω(pe), reaching magnitudes eB(dc)/m(e)cω(pe)~ß(0)√[γ(0)] for an initial sharp shear. The case of an initial smooth shear is also discussed.

Genetic parameter estimates and principal component analysis of breeding values of reproduction and growth traits in female Canchim cattle.

Phenotypic data from female Canchim beef cattle were used to obtain estimates of genetic parameters for reproduction and growth traits using a linear animal mixed model. In addition, relationships among animal estimated breeding values (EBVs) for these traits were explored using principal component analysis. The traits studied in female Canchim cattle were age at first calving (AFC), age at second calving (ASC), calving interval (CI), and bodyweight at 420 days of age (BW420). The heritability estimates for AFC, ASC, CI and BW420 were 0.03±0.01, 0.07±0.01, 0.06±0.02, and 0.24±0.02, respectively. The genetic correlations for AFC with ASC, AFC with CI, AFC with BW420, ASC with CI, ASC with BW420, and CI with BW420 were 0.87±0.07, 0.23±0.02, -0.15±0.01, 0.67±0.13, -0.07±0.13, and 0.02±0.14, respectively. Standardised EBVs for AFC, ASC and CI exhibited a high association with the first principal component, whereas the standardised EBV for BW420 was closely associated with the second principal component. The heritability estimates for AFC, ASC and CI suggest that these traits would respond slowly to selection. However, selection response could be enhanced by constructing selection indices based on the principal components.

Review: Manipulation of follicle development to improve fertility of cattle in timed-artificial insemination programs.

The development of an ovulatory follicle is a fundamental premise for any reproductive management program that aims to optimize fertility in cattle. Controlling follicular development comprises the synchronized emergence of a new follicular wave, selection and growth of the dominant follicle, and synchronized ovulation of a high-quality oocyte. All these follicular events, primarily driven by gonadotropin secretion, occur under a very dynamic hormonal environment. In this sense, controlling follicular development demands essentially a precise manipulation of the hormonal environment to modulate gonadotropin secretion. Furthermore, the effectiveness of hormonal manipulation strategies in the management of follicular development depends on specific particularities of each situation, which can vary widely according to genetic groups (Bos taurus vs Bos indicus), nutritional, metabolic, and reproductive status. In this regard, the constant search for the refined synchrony between the hormonal treatments and reproductive events, considering these distinctions and particularities, have provided valuable information that contributed to the development of efficient reproductive programs. This manuscript discusses the physiological bases behind the development of fine-tuned timed-artificial insemination protocols for beef and dairy cattle that resulted in great improvements in reproductive efficiency of beef and dairy herds.

Ion motion in self-modulated plasma wakefield accelerators.

The effects of plasma ion motion in self-modulated plasma-based accelerators are examined. An analytical model describing ion motion in the narrow beam limit is developed and confirmed through multidimensional particle-in-cell simulations. It is shown that the ion motion can lead to the early saturation of the self-modulation instability and to the suppression of the accelerating gradients. This can reduce the total energy that can be transformed into kinetic energy of accelerated particles. For the parameters of future proton-driven plasma accelerator experiments, the ion dynamics can have a strong impact. Possible methods to mitigate the effects of the ion motion in future experiments are demonstrated.