Detalhe da pesquisa
1.
Machine Learning Identifies Stemness Features Associated with Oncogenic Dedifferentiation.
Cell
; 173(2): 338-354.e15, 2018 04 05.
Artigo
Inglês
| MEDLINE | ID: mdl-29625051
2.
MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging.
Nat Methods
; 19(3): 311-315, 2022 03.
Artigo
Inglês
| MEDLINE | ID: mdl-34824477
3.
MITI minimum information guidelines for highly multiplexed tissue images.
Nat Methods
; 19(3): 262-267, 2022 03.
Artigo
Inglês
| MEDLINE | ID: mdl-35277708
4.
Inferring causal molecular networks: empirical assessment through a community-based effort.
Nat Methods
; 13(4): 310-8, 2016 Apr.
Artigo
Inglês
| MEDLINE | ID: mdl-26901648
5.
A basal stem cell signature identifies aggressive prostate cancer phenotypes.
Proc Natl Acad Sci U S A
; 112(47): E6544-52, 2015 Nov 24.
Artigo
Inglês
| MEDLINE | ID: mdl-26460041
6.
Pathway-Based Genomics Prediction using Generalized Elastic Net.
PLoS Comput Biol
; 12(3): e1004790, 2016 Mar.
Artigo
Inglês
| MEDLINE | ID: mdl-26960204
7.
A large-scale evaluation of computational protein function prediction.
Nat Methods
; 10(3): 221-7, 2013 Mar.
Artigo
Inglês
| MEDLINE | ID: mdl-23353650
8.
Combining heterogeneous data sources for accurate functional annotation of proteins.
BMC Bioinformatics
; 14 Suppl 3: S10, 2013.
Artigo
Inglês
| MEDLINE | ID: mdl-23514123
9.
PARADIGM-SHIFT predicts the function of mutations in multiple cancers using pathway impact analysis.
Bioinformatics
; 28(18): i640-i646, 2012 Sep 15.
Artigo
Inglês
| MEDLINE | ID: mdl-22962493
10.
Erratum: Paired evaluation of machine-learning models characterizes effects of confounders and outliers.
Patterns (N Y)
; 4(8): 100824, 2023 Aug 11.
Artigo
Inglês
| MEDLINE | ID: mdl-37602216
11.
Paired evaluation of machine-learning models characterizes effects of confounders and outliers.
Patterns (N Y)
; 4(8): 100791, 2023 Aug 11.
Artigo
Inglês
| MEDLINE | ID: mdl-37602225
12.
Matrix and analysis metadata standards (MAMS) to facilitate harmonization and reproducibility of single-cell data.
bioRxiv
; 2023 Mar 07.
Artigo
Inglês
| MEDLINE | ID: mdl-36945543
13.
Addressing persistent challenges in digital image analysis of cancerous tissues.
bioRxiv
; 2023 Jul 24.
Artigo
Inglês
| MEDLINE | ID: mdl-37547011
14.
Metabolic modulation of mitochondrial mass during CD4+ T cell activation.
Cell Chem Biol
; 30(9): 1064-1075.e8, 2023 09 21.
Artigo
Inglês
| MEDLINE | ID: mdl-37716347
15.
Design principles to assemble drug combinations for effective tuberculosis therapy using interpretable pairwise drug response measurements.
Cell Rep Med
; 3(9): 100737, 2022 09 20.
Artigo
Inglês
| MEDLINE | ID: mdl-36084643
16.
A community-based approach to image analysis of cells, tissues and tumors.
Comput Med Imaging Graph
; 95: 102013, 2022 01.
Artigo
Inglês
| MEDLINE | ID: mdl-34864359
17.
Early on-treatment transcriptional profiling as a tool for improving pathological response prediction in HER2-positive inflammatory breast cancer.
Ther Adv Med Oncol
; 14: 17588359221113269, 2022.
Artigo
Inglês
| MEDLINE | ID: mdl-35923923
18.
Causal inference in medical records and complementary systems pharmacology for metformin drug repurposing towards dementia.
Nat Commun
; 13(1): 7652, 2022 Dec 10.
Artigo
Inglês
| MEDLINE | ID: mdl-36496454
19.
Systematic measurement of combination-drug landscapes to predict in vivo treatment outcomes for tuberculosis.
Cell Syst
; 12(11): 1046-1063.e7, 2021 11 17.
Artigo
Inglês
| MEDLINE | ID: mdl-34469743
20.
Machine learning identifies candidates for drug repurposing in Alzheimer's disease.
Nat Commun
; 12(1): 1033, 2021 02 15.
Artigo
Inglês
| MEDLINE | ID: mdl-33589615