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1.
Biophys J ; 96(4): 1586-96, 2009 Feb 18.
Artigo em Inglês | MEDLINE | ID: mdl-19217874

RESUMO

Molecular flexibility and rigidity are required to determine the function and specificity of protein molecules. Some psychrophilic enzymes demonstrate a higher catalytic efficiency at low temperatures, compared to the efficiency demonstrated by their meso/thermophilic homologous. The emerging picture suggests that such enzymes have an improved flexibility of the structural catalytic components, whereas other protein regions far from functional sites may be even more rigid than those of their mesophilic counterparts. To gain a deeper insight in the analysis of the activity-flexibility/rigidity relationship in protein structure, psychrophilic carbonic anhydrase of the Antarctic teleost Chionodraco hamatus has been compared with carbonic anhydrase II of Bos taurus through fluorescence studies, three-dimensional modeling, and activity analyses. Data demonstrated that the cold-adapted enzyme exhibits an increased catalytic efficiency at low and moderate temperatures and, more interestingly, a local flexibility in the region that controls the correct folding of the catalytic architecture, as well as a rigidity in the hydrophobic core. The opposite result was observed in the mesophilic counterpart. These results suggest a clear relationship between the activity and the presence of flexible and rigid protein substructures that may be useful in rational molecular and drug design of a class of enzymes playing a key role in pathologic processes.


Assuntos
Anidrases Carbônicas/química , Sequência de Aminoácidos , Animais , Bovinos , Interações Hidrofóbicas e Hidrofílicas , Cinética , Luz , Modelos Moleculares , Dados de Sequência Molecular , Perciformes , Maleabilidade , Conformação Proteica , Espalhamento de Radiação , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Software , Espectrometria de Fluorescência , Temperatura , Termodinâmica
2.
Lab Chip ; 14(22): 4391-7, 2014 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-25238401

RESUMO

Liquid flow in microchannels is completely laminar and uniaxial, with a very low Reynolds number regime and long mixing lengths. To increase fluid mixing and solubility of reactants, as well as to reduce reaction time, complex three-dimensional networks inducing chaotic advection have to be designed. Alternatively, turbulence in the liquid can be generated by active mixing methods (magnetic, acoustic waves, etc.) or adding small quantities of elastic materials to the working liquid. Here, polyelectrolyte multilayer capsules embodying a catalytic polyoxometalate complex have been suspended in an aqueous solution and used to create elastic turbulence and to propel fluids inside microchannels as an alternative to viscoelastic polymers. The overall effect is enhanced and controlled by feeding the polyoxometalate-modified capsules with hydrogen peroxide, H2O2, thus triggering an on-demand propulsion due to oxygen evolution resulting from H2O2 decomposition. The quantification of the process is done by analysing some structural parameters of motion such as speed, pressure, viscosity, and Reynolds and Weissenberg numbers, directly obtained from the capillary dynamics of the aqueous mixtures with different concentrations of H2O2. The increases in fluid speed as well as the capsule-induced turbulence effects are proportional to the H2O2 added and therefore dependent on the kinetics of H2O2 dismutation.

3.
J Chem Phys ; 125(2): 21103, 2006 Jul 14.
Artigo em Inglês | MEDLINE | ID: mdl-16848568

RESUMO

Electrical conduction in solid state disordered multilayers of non-redox proteins is demonstrated by two-terminal transport experiments at the nanoscale and by scanning tunneling microscopy (STM/STS experiments). We also show that the conduction of the biomolecular films can be modulated by means of a gate field. These results may lead to the implementation of protein-based three-terminal nanodevices and open important new perspectives for a wide range of bioelectronic/biosensing applications.


Assuntos
Físico-Química/métodos , Eletroquímica/métodos , Proteínas/química , Animais , Técnicas Biossensoriais , Bovinos , Condutividade Elétrica , Elétrons , Microscopia de Tunelamento , Nanopartículas/química , Nanotecnologia/métodos , Oxirredução , Peptídeos/química , Conformação Proteica , Soroalbumina Bovina/química , Temperatura
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