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1.
New Phytol ; 242(4): 1739-1752, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38581206

RESUMO

The development of terrestrial ecosystems depends greatly on plant mutualists such as mycorrhizal fungi. The global retreat of glaciers exposes nutrient-poor substrates in extreme environments and provides a unique opportunity to study early successions of mycorrhizal fungi by assessing their dynamics and drivers. We combined environmental DNA metabarcoding and measurements of local conditions to assess the succession of mycorrhizal communities during soil development in 46 glacier forelands around the globe, testing whether dynamics and drivers differ between mycorrhizal types. Mycorrhizal fungi colonized deglaciated areas very quickly (< 10 yr), with arbuscular mycorrhizal fungi tending to become more diverse through time compared to ectomycorrhizal fungi. Both alpha- and beta-diversity of arbuscular mycorrhizal fungi were significantly related to time since glacier retreat and plant communities, while microclimate and primary productivity were more important for ectomycorrhizal fungi. The richness and composition of mycorrhizal communities were also significantly explained by soil chemistry, highlighting the importance of microhabitat for community dynamics. The acceleration of ice melt and the modifications of microclimate forecasted by climate change scenarios are expected to impact the diversity of mycorrhizal partners. These changes could alter the interactions underlying biotic colonization and belowground-aboveground linkages, with multifaceted impacts on soil development and associated ecological processes.


Assuntos
Biodiversidade , Camada de Gelo , Micorrizas , Micorrizas/fisiologia , Camada de Gelo/microbiologia , Solo/química , Microclima , Microbiologia do Solo
2.
Crit Rev Food Sci Nutr ; 63(22): 5841-5855, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-35014569

RESUMO

Fermented foods are important parts of traditional food culture with a long history worldwide. Abundant nutritional materials and open fermentation contribute to the diversity of microorganisms, resulting in unique product quality and flavor. Lactic acid bacteria (LAB), as important part of traditional fermented foods, play a decisive role in the quality and safety of fermented foods. Reproduction and metabolic of microorganisms drive the food fermentation, and microbial interaction plays a major role in the fermentation process. Nowadays, LAB have attracted considerable interest due to their potentialities to add functional properties to certain foods or as supplements along with the research of gut microbiome. This review focuses on the characteristics of diversity and variability of LAB in traditional fermented foods, and describes the principal mechanisms involved in the flavor formation dominated by LAB. Moreover, microbial interactions and their mechanisms in fermented foods are presented. They provide a theoretical basis for exploiting LAB in fermented foods and improving the quality of traditional fermented foods. The traditional fermented food industry should face the challenge of equipment automation, green manufacturing, and quality control and safety in the production.


Assuntos
Alimentos Fermentados , Lactobacillales , Lactobacillales/metabolismo , Alimentos Fermentados/microbiologia , Alimentos , Fermentação , Microbiologia de Alimentos
3.
Biometrics ; 79(4): 3664-3675, 2023 12.
Artigo em Inglês | MEDLINE | ID: mdl-36715694

RESUMO

The Alaskan landscape has undergone substantial changes in recent decades, most notably the expansion of shrubs and trees across the Arctic. We developed a Bayesian hierarchical model to quantify the impact of climate change on the structural transformation of ecosystems using remotely sensed imagery. We used latent trajectory processes to model dynamic state probabilities that evolve annually, from which we derived transition probabilities between ecotypes. Our latent trajectory model accommodates temporal irregularity in survey intervals and uses spatio-temporally heterogeneous climate drivers to infer rates of land cover transitions. We characterized multi-scale spatial correlation induced by plot and subplot arrangements in our study system. We also developed a Pólya-Gamma sampling strategy to improve computation. Our model facilitates inference on the response of ecosystems to shifts in the climate and can be used to predict future land cover transitions under various climate scenarios.


Assuntos
Mudança Climática , Ecossistema , Teorema de Bayes
4.
Environ Sci Technol ; 57(48): 19782-19792, 2023 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-37966898

RESUMO

Dissolved organic matter (DOM) is involved in numerous biogeochemical processes, and understanding the ecological succession of DOM is crucial for predicting its response to farming (e.g., fertilization) practices. Although plentiful studies have examined how fertilization practice affects the content of soil DOM, it remains unknown how long-term fertilization drives the succession of soil DOM over temporal scales. Here, we investigated the succession of DOM in paddy rice rhizosphere soils subjected to different long-term fertilization treatments (CK: no fertilization; NPK: inorganic fertilization; OM: organic fertilization) along with plant growth. Our results demonstrated that long-term fertilization significantly promoted the molecular chemodiversity of DOM, but it weakened the correlation between DOM composition and plant development. Time-decay analysis indicated that the DOM composition had a shorter halving time under CK treatment (94.7 days), compared to NPK (337.4 days) and OM (223.8 days) treatments, reflecting a lower molecular turnover rate of DOM under fertilization. Moreover, plant development significantly affected the assembly process of DOM only under CK, not under NPK and OM treatments. Taken together, our results demonstrated that long-term fertilization, especially inorganic fertilization, greatly weakens the ecological succession of DOM in the plant rhizosphere, which has a profound implication for understanding the complex plant-DOM interactions.


Assuntos
Oryza , Solo , Solo/química , Rizosfera , Matéria Orgânica Dissolvida , Fertilização , Fertilizantes/análise
5.
Oecologia ; 201(4): 979-989, 2023 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-36976354

RESUMO

Dispersal is a key influence on species' persistence, particularly in the context of habitat fragmentation and environmental change. Previously, residual population synchrony has been demonstrated to be an effective proxy for dispersal in mobile butterflies (Powney et al. 2012). Here, we highlight the utility and limitations of population synchrony as an indicator of functional connectivity and persistence, at a range of spatial scales, in a specialist, sedentary butterfly. While at the local scale, population synchrony is likely indicative of dispersal in the pearl-bordered fritillary, Boloria euphrosyne, over larger scales, habitat is likely to influence population dynamics. Although declines in local-scale synchrony conformed to typical movement in this species, synchrony showed no significant trend with distance when studied at larger (between-site) scales. By focusing on specific site comparisons, we draw the conclusion that heterogeneity in habitat successional stage drives asynchrony between sites at larger distances and is, therefore, likely to be a more important driver of population dynamics over large distances than dispersal. Within-site assessments of synchrony highlight differences in dispersal based on habitat type, with movement shown to be most inhibited between transect sections with contrasting habitat permeability. While synchrony has implications for metapopulation stability and extinction risk, no significant difference was found in average site synchrony between sites that had gone extinct during the study period and those remaining occupied. We demonstrate that population synchrony may be used to assess local-scale movement between sedentary populations, as well as to understand barriers to dispersal and guide conservation management.


Assuntos
Borboletas , Animais , Ecossistema , Dinâmica Populacional
6.
Environ Res ; 233: 116438, 2023 09 15.
Artigo em Inglês | MEDLINE | ID: mdl-37331559

RESUMO

Ecological macroalgal succession in glacier-free areas has remained at the pioneer seral stage despite six decades of glacial retreat at Marian Cove, King George Island, Antarctica. With the rapid melting of glaciers in the West Antarctic Peninsula owing to global warming, a massive amount of meltwater is flowing into the coast, creating marine environmental gradients such as turbidity, water temperature, and salinity. This study examined the spatial and vertical distributions (up to a depth of 25 m) of macroalgal assemblages from nine sites in Maxwell Bay and Marian Cove. The macroalgal assemblages were analyzed for six sites located 0.2, 0.8, 1.2, 2.2, 3.6, and 4.1 km away from the glacier, including three sites where the glacial retreat history of Marian Cove could be estimated. To investigate the effects of meltwater, differences in the coastal environment were analyzed based on data collected from five stations located 0.4, 0.9, 3.0, 4.0, and 5.0 km away from the glacier. The macroalgal assemblages and marine environment were divided into two groups-inside and outside the cove-based on the region 2-3 km away from the glacier, which has been ice-free since 1956 and shows significant differences. In the three sites near the glacier front, Palmaria decipiens was dominant, and three to four species were distributed, whereas in the two sites outside the cove, nine and 14 species appeared, respectively, similar to the assemblage of the other three sites in Maxwell Bay. Palmaria decipiens, a representative opportunistic pioneer species in Antarctica, is dominant because of its physiological adaptation despite the high turbidity and low water temperature of the glacier front. This study shows that macroalgal assemblages in Antarctic fjord-like coves respond to glacial retreat and are valuable in understanding the macroalgal succession in Antarctica.


Assuntos
Ecossistema , Estuários , Regiões Antárticas , Água , Camada de Gelo
7.
BMC Biol ; 20(1): 262, 2022 11 30.
Artigo em Inglês | MEDLINE | ID: mdl-36447225

RESUMO

BACKGROUND: During range expansion in spatially distributed habitats, organisms differ from one another in terms of their patterns of localization versus propagation. To exploit locations or explore the landscape? This is the competition-colonization trade-off, a dichotomy at the core of ecological succession. In bacterial communities, this trade-off is a fundamental mechanism towards understanding spatio-temporal fluxes in microbiome composition. RESULTS: Using microfluidics devices as structured bacterial habitats, we show that, in a synthetic two-species community of motile strains, Escherichia coli is a fugitive species, whereas Pseudomonas aeruginosa is a slower colonizer but superior competitor. We provide evidence highlighting the role of succession and the relevance of this trade-off in the community assembly of bacteria in spatially distributed patchy landscapes. Furthermore, aggregation-dependent priority effects enhance coexistence which is not possible in well-mixed environments. CONCLUSIONS: Our findings underscore the interplay between micron-scale landscape structure and dispersal in shaping biodiversity patterns in microbial ecosystems. Understanding this interplay is key to unleash the technological revolution of microbiome applications.


Assuntos
Infecções por Escherichia coli , Microbiota , Humanos , Biodiversidade , Escherichia coli , Pseudomonas aeruginosa
8.
Glob Chang Biol ; 28(23): 6973-6991, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36087341

RESUMO

Ecosystems shaped by retreating glaciers provide a unique opportunity to study the order and timing of biotic colonization, and how this influences the structure of successive ecological communities. In the last century glaciers across most of the cryosphere have receded at an unprecedented pace. Many studies have been published from different parts of the world testing hypotheses about how soil ecosystems are responding to rapid, contemporary deglaciation events. To better understand and draw general conclusions about how soil ecosystems respond to deglaciation, we conducted a global meta-analysis of 95 published articles focused on the succession of various organisms and soil physicochemical properties in glacier forefields along the chronosequence. Our global synthesis reveals that key soil properties and the abundance and richness of biota follow two conspicuous patterns: (1) some taxa demonstrate a persistent increase in abundance and richness over the entire chronosequence, (2) other taxa increase in abundance and richness during the first 50 years of succession, then gradually decline 50 years onward. The soil properties and soil organisms that are intimately tied to vegetation follow the first pattern, consistent with the idea that aboveground patterns of vegetation can drive patterns of belowground biodiversity. The second pattern may be due to an initial increase and subsequent decline in available nutrients and habitat suitability caused by increased biotic interactions, including resource competition among soil biota. A consensus view of the patterns of historical and contemporary soil ecosystem responses to deglaciation provides a better understanding of the processes that generate these patterns and informs predictions of ongoing and future responses to environmental changes.


Assuntos
Ecossistema , Camada de Gelo , Biodiversidade , Solo/química , Microbiologia do Solo
9.
Glob Chang Biol ; 28(13): 3995-3997, 2022 07.
Artigo em Inglês | MEDLINE | ID: mdl-35485230

RESUMO

Droughts exarcerbate Plant-soil feedbacks (PSFs) making positive PSFs more positive and negative PSFs more negative. Alterations in PSFs that droughts induce could relate to the rooting depth of the tested plants. We present some rare evidence on how a driver of global change will alter a biotic interaction.


Assuntos
Secas , Solo , Retroalimentação , Plantas
10.
Appl Microbiol Biotechnol ; 106(13-16): 5287-5300, 2022 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-35802158

RESUMO

Animal carcasses introduce large amounts of nitrates and ammonium into the soil ecosystem. Some of this ammonium is transformed from nitrite through the nrfA-type microbial community. However, it is unclear how nrfA-type microorganisms respond to the decomposition of corpses. This study applied high-throughput sequencing to characterize the ecological succession of nrfA-type microbial communities in grassland soil. Our results showed that Cyclobacterium and Trueperella were the predominant genera for nrfA-type communities in soil with a decomposing corpse (experimental group), while Cyclobacterium and Archangium were dominant in soil without a corpse (control group). The alpha diversity indexes and the resistance and resilience indexes of the microbial communities initially increased and then decreased during decomposition. Compared with the control group, nrfA-encoding community structure in the experimental group gradually became divergent with succession and temporal turnover accelerated. Network analysis revealed that the microbial communities of the experimental group had more complex interactions than those of the control groups. Moreover, the bacterial community assembly in the experimental group was governed by stochastic processes, and the communities of the experimental group had a weaker dispersal capacity than those of the control group. Our results reveal the succession patterns of the nrfA-type microbial communities during degradation of wild animal corpses, which can offer references for demonstrating the ecological mechanism underlying the changes in the nrfA-type microbial community during carcass decay. KEY POINTS: • Corpse decay accelerates the temporal turnover of the nrfA-type community in soil. • Corpse decay changes the ecological succession of the nrfA-type community in soil. • Corpse decay leads to a complex co-occurrence pattern of the nrfA-type community in soil.


Assuntos
Compostos de Amônio , Microbiota , Animais , Animais Selvagens , Cadáver , Solo/química , Microbiologia do Solo
11.
Proc Natl Acad Sci U S A ; 116(30): 14852-14861, 2019 07 23.
Artigo em Inglês | MEDLINE | ID: mdl-31292259

RESUMO

The dynamics of ecological change following a major perturbation, known as succession, are influenced by random processes. Direct quantitation of the degree of contingency in succession requires chronological study of replicate ecosystems. We previously found that population dynamics in carefully controlled, replicated synthetic microbial ecosystems were strongly deterministic over several months. Here, we present simplified, two-species microbial ecosystems consisting of algae and ciliates, imaged in toto at single-cell resolution with fluorescence microscopy over a period of 1 to 2 weeks. To directly study succession in these ecosystems, we deliberately varied the initial cell abundances over replicates and quantified the ensuing dynamics. The distribution of abundance trajectories rapidly converged to a nearly deterministic path, with small fluctuations, despite variations in initial conditions, environmental perturbations, and intrinsic noise, indicative of homeorhesis. Homeorhesis was also observed for certain phenotypic variables, such as partitioning of the ciliates into distinct size classes and clumping of the algae. Although the mechanism of homeorhesis observed in these synthetic ecosystems remains to be elucidated, it is clear that it must emerge from the ways each species controls its own internal states, with respect to a diverse set of environmental conditions and ecological interactions.


Assuntos
Chlamydomonas reinhardtii/fisiologia , Ecossistema , Homeostase , Tetrahymena thermophila/fisiologia , Simbiose
12.
Food Microbiol ; 93: 103608, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-32912581

RESUMO

Cocoa beans used for chocolate production are fermented seeds of Theobroma cacao obtained by a natural fermentation process. The flavors and chemical compounds produced during the fermentation process make this step one of the most important in fine chocolate production. Herein, an integrative analysis of the variation of microbial community structure, using a shotgun metagenomics approach and associated physicochemical features, was performed during fermentation of fine cocoa beans. Samples of Forastero variety (FOR) and a mixture of two hybrids (PS1319 and CCN51) (MIX) from Bahia, Brazil, were analyzed at 7 different times. In the beginning (0 h), the structures of microbial communities were very different between FOR and MIX, reflecting the original plant-associated microbiomes. The highest change in microbial community structures occurred at the first 24 h of fermentation, with a marked increase in temperature and acetic acid concentration, and pH decrease. At 24-48 h both microbial community structures were quite homogenous regarding temperature, acetic acid, succinic acid, pH, soluble proteins and total phenols. During 72-96 h, the community structure resembles an acidic and warmer environment, prevailing few acetic acid bacteria. Taxonomic richness and abundance at 72-144 h exhibited significant correlation with temperature, reducing sugars, succinic, and acetic acids. Finally, we recommend that dominant microbial species of spontaneous fine cocoa fermentations should be considered as inoculum in accordance with the farm/region and GMP to maintain a differential organoleptic feature for production of fine chocolate. In our study, a starter inoculum composed of Acetobacter pausterianus and Hanseniaspora opuntiae strains is indicated.


Assuntos
Cacau/microbiologia , Fermentação , Alimentos Fermentados , Microbiologia de Alimentos , Metagenômica/métodos , Ácido Acético/metabolismo , Acetobacter/metabolismo , Bactérias/metabolismo , Brasil , Chocolate , Aromatizantes , Hanseniaspora/genética , Hanseniaspora/metabolismo , Microbiota/genética , Sementes/microbiologia
13.
J Environ Manage ; 300: 113637, 2021 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-34521006

RESUMO

The succession-driven reed bed habitat hosts a unique flora and fauna including several endangered invertebrate species. Reed beds can be managed through commercial winter harvest, with implications for reed bed conservation. However, the effects of winter harvest on the invertebrate community are not well understood and vary across studies and taxonomic levels. The aim of this study was to investigate the effects of reed harvest on invertebrate communities. Ground-dwelling and aerial invertebrates were continuously sampled for 10 weeks in the largest coherent reed bed of Scandinavia in order to assess how time since last reed harvest (0, 3, and 25-years) influences invertebrate biomass, biodiversity and community structure across taxonomic levels. Biomass was measured and all specimens were sorted to order level, and Coleoptera was even sorted to species level. The invertebrate community showed distinct compositional differences across the three reed bed ages. Furthermore, biomass of both aerial and ground-dwelling invertebrates was highest in the age-0 reed bed and lowest in the age-25 reed bed. Generally, biodiversity showed an opposite trend with the highest richness and diversity in the age-25 reed bed. We conclude that it is possible to ensure high insect biomass and diversity by creating a mosaic of reed bed of different ages through small-scale harvest in the largest coherent reed bed in Scandinavia. The youngest red beds support a high invertebrate biomass whereas the oldest reed beds support a high biodiversity. Collectively, this elevate our understanding of reed harvest and the effects it has on the invertebrate communities, and might aid in future reed bed management and restoration.


Assuntos
Biodiversidade , Invertebrados , Animais , Biomassa , Ecossistema , Insetos
14.
Oecologia ; 193(3): 677-687, 2020 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-32648114

RESUMO

Ecological theory suggests that a combination of local and regional factors regulate biodiversity and community functioning in metacommunities. The relative importance of different factors structuring communities likely changes over successional time, but to date this concept is scarcely documented. In addition, the few studies describing successional dynamics in metacommunity regulation have only focused on a single group of organisms. Here, we report results of an experimental study testing the effect size of initial local community composition and dispersal between local patches on community dynamics of benthic microalgae and their associated bacteria over community succession. Our results show that over time dispersal outweighed initial effects of community composition on microalgal evenness and biomass, microalgal ß-diversity, and the ratio of bacteria to microalgae. At the end of the experiment (ca. 20 microalgae generations), dispersal significantly decreased microalgal evenness and ß-diversity by promoting one regionally superior competitor. Dispersal also decreased the ratio of bacteria to microalgae, while it significantly increased microalgal biomass. These results suggest that the dispersal-mediated establishment of a dominant and superior microalgae species prevented bacteria from gaining competitive advantage over the autotrophs in these metacommunities, ultimately maintaining the provision of autotrophic biomass. Our study emphasizes the importance of time for dispersal to be a relevant community-structuring mechanism. Moreover, we highlight the need for considering multiple competitors in complex metacommunity systems to properly pinpoint the consequences of local change in dominance through dispersal for metacommunity function.


Assuntos
Microalgas , Bactérias , Biodiversidade , Biomassa , Ecossistema , Dinâmica Populacional
15.
J Environ Manage ; 266: 110613, 2020 Jul 15.
Artigo em Inglês | MEDLINE | ID: mdl-32392146

RESUMO

Mining activities on metal sulphide ores are considered one of the most environmentally damaging anthropogenic activities worldwide, mainly due to the production of metal(loid)- enriched tailings. The objective of the work was to elucidate which factors, including edaphic, vegetation and microbiological aspects, determine soil functionality in the phytomagement of mine tailings piles in semiarid areas. For this purpose, a field study was conducted using a transect experimental design in a former mining area located in southern Spain. Soil characteristics, including edaphic parameters, bacterial and fungal compositions, were determined. The variation in edaphic parameters (pH, electrical conductivity, organic carbon, particle size distribution, etc) through the deterioration transect caused a decrease in plant and microbial diversities, as well as in microbial productivity measured by enzymatic activities. Variation in bacterial relative abundances through the transect was better explained by soil fertility related factors, such as organic matter, pH, salinity, enzymatic activities or microbial biomass (which in turn were related to the presence of plants), than by metals concentrations. The presence of vegetation at the tailings allowed the transition from lithotrophic bacterial orders which dominated in bare tailings areas (e.g. Acidimicrobiales, Chromatiales) to organotrophic oriented orders (e.g. Cytophagales, Actinomycetales). Vegetated patches at the tailings pile and its borders shared some organotrophic bacteria with control forest samples (e.g. Rhizobiales), indicating that natural plant mediated successional processes might stimulate biogeochemical cycles similar to those occurring at non-polluted systems. This functionality of the impacted sites, which include unfavourable edaphic conditions, should be taken into account in the phytomanagement of mine tailings, since it may support its long-term sustainability. Unlike bacteria, variations in fungal relative abundances through the transect were not clearly explained by soil parameters or the presence of plants. Other factors related to spatial distribution or the type of organic substrates may be more determinant in the case of fungi.


Assuntos
Ecossistema , Poluentes do Solo , Biodegradação Ambiental , Mineração , Solo , Espanha
16.
J Environ Manage ; 241: 284-292, 2019 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-31009816

RESUMO

Plant species identity is assumed to be a major driver of belowground microbial diversity and composition. However, diagnosing which plant functional traits are responsible for shaping microbial communities remains elusive. Primary succession on barren metalliferous mining substrates was selected as the framework to study above-belowground interactions, and plant functional traits that lead the successional trajectories of soil bacterial communities were identified. The impact of the plant functional group (i.e. trees, shrubs, dwarf shrubs, perennial grasses), a trait integrating the life span and morphological structure, on the bacterial primary succession was monitored. Bacterial diversity and composition was estimated along plant size gradients including over 90 scattered patches ranging from seedlings to mature multispecific patches. Soil bacterial diversity was affected by heavy metals levels and increased towards higher resource availability underneath mature patches, with stress-tolerant heterotrophs and phototrophs being replaced by competitive heterotrophs. The plant functional group modulated these general patterns and shrubs had the greatest impact belowground by inducing the largest increase in soil fertility. Functional traits related to leaf decomposability and root architecture further determined the composition and structure of bacterial communities. These results underline the importance of plant functional traits in the assembly of soil bacterial communities, and can help guiding restoration of degraded lands.


Assuntos
Microbiologia do Solo , Solo , Bactérias , Mineração , Plantas
17.
Antonie Van Leeuwenhoek ; 111(11): 2061-2078, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-29846874

RESUMO

Disentangling the relative influences of soil properties and plant-host on root-associated microbiomes in natural systems is challenging, given that spatially segregated soil types display distinct historical legacies. In addition, distant locations may also lead to biogeographical patterns of microbial communities. Here, we used an undisturbed salt marsh chronosequence spanning over a century of ecosystem development to investigate changes in the community composition and abundance of a set of nitrogen-cycling genes. Specifically, we targeted genes of diazotrophs and ammonia oxidizers associated with the bulk and rhizosphere soil of the plant species Limonium vulgare. Samples were collected across five distinct successional stages of the chronosequence (ranging from 5 to 105 years) at two time-points. Our results indicate that soil variables such as sand:silt:clay % content and pH strongly relates to the abundance of N-cycling genes in the bulk soil. However, in the rhizosphere samples, the abundance of ammonia-oxidizing organisms (both bacteria and archaea, AOB and AOA, respectively) was relatively constant across most of the successional stages, albeit displaying seasonal variation. This result indicates a potentially stronger control of plant host (rather than soil) on the abundance of these organisms. Interestingly, the plant host did not have a significant effect on the composition of AOA and AOB communities, being mostly divergent according to soil successional stages. The abundance of diazotrophic communities in rhizosphere samples was more affected by seasonality than those of bulk soil. Moreover, the abundance pattern of diazotrophs in the rhizosphere related to the systematic increase of plant biomass and soil organic matter along the successional gradient. These results suggest a potential season-dependent regulation of diazotrophs exerted by the plant host. Overall, this study contributes to a better understanding of how the natural formation of a soil and host plants influence the compositional and abundance changes of nitrogen-cycling genes in bulk and rhizosphere soil microhabitats.


Assuntos
Archaea/metabolismo , Nitrogênio/metabolismo , Actinobacteria/classificação , Actinobacteria/genética , Actinobacteria/metabolismo , Archaea/classificação , Archaea/genética , Cardiolipinas/metabolismo , Glicosilfosfatidilinositóis/metabolismo , Fosfatidilgliceróis/metabolismo , Fosfatidilinositóis/metabolismo , RNA Ribossômico 16S/genética
18.
Am Nat ; 190(4): E94-E105, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28937808

RESUMO

Identifying the diversity of contexts that can lead to hybridization is important for understanding its prevalence and dynamics in natural populations. Despite the potential of ecological succession to dramatically alter species co-occurrence and abundances, it is unknown whether it directly promotes hybridization and, if so, has long-lasting consequences. Here, we summarize 30 years of survey data across 10 populations to show that in western and mountain bluebirds, heterospecific pairing occurs during repeatable and transient colonization events at the early stages of species turnover. Despite mixed pairing occurring only during early succession, genetic data showed presence of hybrids at both early and late successional stages. Moreover, hybrids showed novel patterns of variation in morphology and behavior, emphasizing that even ephemeral contexts for hybridization can have important evolutionary consequences. Our results suggest that because ecological succession often brings together closely related competitors in disparate numbers but lasts for only a brief period of time, it may be a widespread but underappreciated context for hybridization.


Assuntos
Evolução Biológica , Ecologia , Hibridização Genética , Animais , Aves Canoras
19.
J Theor Biol ; 392: 107-12, 2016 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-26746388

RESUMO

Community diversity is usually characterized by numerical indexes; however it indeed depends on the species abundance distribution (SAD). Diversity indexes and SAD are based on the same information but treating as separate themes. Ranking species abundance from largest to smallest, the decreasing pattern can give the information about the SAD. Frontier proposed such SAD might be a fractal structure, and first applied the Zipf-Mandelbrot model to the SAD study. However, this model fails to include the Zipf model, and also fails to ensure an integer rank. In this study, a fractal model of SAD was reconstructed, and tested with 104 community samples from 8 taxonomic groups. The results show that there was a good fit of the presented model. Fractal parameter (p) determines the SAD of a community. The ecological significance of p relates to the "dominance" of a community. The correlation between p and classical diversity indexes show that Shannon index decreases and Simpson index increases as p increases. The main purpose of this paper is not to compare with other SADs models; it simply provides a new interpretation of SAD model construction, and preliminarily integrates diversity indexes and SAD model into a broader perspective of community diversity.


Assuntos
Biodiversidade , Modelos Biológicos
20.
Sci Total Environ ; 919: 170858, 2024 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-38342451

RESUMO

Steel slag (SS) has many applications, but its immediate reuse is not possible due to its inherent swelling potential and presence of toxic metals. Therefore, it can only be used after the aging process, which can be either natural or artificial. While few large-scale steel plants afford artificial aging, many small-scale ones opt for natural aging through stockpiling of SS. This results in an increase in soil pH to over 12, thus damaging the ecosystem and making it unviable for plant growth. This research focuses on the reclamation of land affected by SS through the formation of a Phyto-barrier using 22 native plant species aided by the application of a 2 % (v/v) solution of the organic amendment. Furthermore, the superior performance of plants belonging to the Fabaceae family was ascertained, while establishing Sesbania grandiflora as an able species for aided-phytoremediation due to its remarkable growth (≈ 10 ft tall and 33 cm in circumference) during the study period. The CO2 sequestered by the plantation showed that maximum sequestration has been done by Sesbania grandiflora (49.96 kg CO2 / tree/ year), and least by Azadirachta indica (0.35 kg CO2/tree/year). The overall CO2 sequestered by the plantation stood at 3.85 tons/year. A cost-benefit analysis of using aided-phytoremediation indicates an expense of 90 $ per year as the recurring expense, while carbon credits if monetized, would yield 154 $ to 308 $ as returns. The investigations of this study established a new approach to vegetation over SS-affected land, through native species and the application of organic amendment.


Assuntos
Dióxido de Carbono , Ecossistema , Biodegradação Ambiental , Aço , Solo
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