Blobs form during the single-file transport of proteins across nanopores.

The transport of biopolymers across nanopores is an important biological process currently under investigation for the rapid analysis of DNA and proteins. While the transport of DNA is generally understood, methods to induce unfolded protein translocation have only recently been discovered (Yu et al., 2023, Sauciuc et al., 2023). Here, we found that during electroosmotically driven translocation of polypeptides, blob-like structures typically form inside nanopores, often obstructing their transport and preventing addressing individual amino acids. This is in contrast with the electrophoretic transport of DNA, where the formation of such structures has not been reported. Comparisons between different nanopore sizes and shapes and modifications by different surface chemistries allowed formulating a mechanism for blob formation. We also show that single-file transport can be achieved by using 1) nanopores that have an entry and an internal diameter smaller than the persistence length of the polymer, 2) nanopores with a nonsticky (i.e., nonaromatic) inner surface, and 3) moderate translocation velocities. These experiments provide a basis for understanding polypeptide transport under confinement and for improving the design and engineering of nanopores for protein analysis.

Controlled Translocation of Proteins through a Biological Nanopore for Single-Protein Fingerprint Identification.

After the successful sequencing of nucleic acids, nanopore technology has now been applied to proteins. Recently, it has been demonstrated that an electro-osmotic flow can be used to induce the transport of unraveled polypeptides across nanopores. Polypeptide translocation, however, is too fast for accurate reading its amino acid compositions. Here, we show that the introduction of hydrophobic residues into the lumen of the nanopore reduces the protein translocation speed. Importantly, the introduction of a tyrosine at the entry of the nanopore and an isoleucine at the entry of the ß-barrel of the nanopore reduced the speed of translocation to ∼10 amino acids/millisecond while keeping a relatively large ionic current, a crucial component for protein identification. These nanopores showed unique features within their current signatures, which may pave the way toward protein fingerprinting using nanopores.

Ion Selectivity, Current, and Water Flow Regulation in Ti3C2 MXene Nanopores.

Recent years have seen a growing interest in zero-dimensional (0D) transport phenomena occurring across two-dimensional (2D) materials for their potential applications to nanopore technology such as ion separation and molecular sensing. Herein, we investigate ion transport through 1 nm-wide nanopores in Ti3C2 MXene using molecular dynamics simulations. The high polarity and fish-bone arrangement of the Ti3C2 MXene offer a built-in potential and an atomic-scale distortion to the nanopore, causing an adsorption preference for cations. Our observation of variable cation-specific ion selectivity and Coulomb blockade highlights the complex interplay between adsorption affinity and cation size. The cation-specific ion selectivity can induce both the ion current and electro-osmotic water transmission, which can be regulated by tailoring the ions' preferential pathways through electric field tilting. Our finding underscores the pivotal role of the atomic arrangement of MXenes in 0D ion transport and provides fundamental insight into the application of 2D material in nanopores-based technologies.

Effects of Tween 20 addition on electrokinetic transport in a polydimethylsiloxane microchannel.

Tween 20 is frequently added to particle suspensions for reducing the particle-wall adhesion and particle-particle aggregation in microfluidic devices. However, the influences of Tween 20 on the fluid and particle behaviors have been largely ignored. We present in this work the first experimental study of the effects of Tween 20 addition on the electrokinetic transport of fluids and particles in a polydimethylsiloxane microchannel. We find that adding 0.1% v/v Tween 20 to a buffer solution can significantly reduce the electroosmotic mobility as well as the electrokinetic and electrophoretic mobilities of polystyrene particles and yeast cells. Further increasing the Tween 20 concentration within the range typically used in microfluidic applications continues reducing these mobility values, but at a smaller rate. Our finding suggests that Tween 20 should be used with care in electrokinetic microdevices when the flow rate or particle/cell throughput is an important parameter.

Entropy generation in a ciliary flow of an Eyring-Powell ternary hybrid nanofluid through a channel with electroosmosis and mixed convection.

Drug delivery systems, where the nanofluid flow with electroosmosis and mixed convection can help in efficient and targeted drug delivery to specific cells or organs, could benefit from understanding the behavior of nanofluids in biological systems. In current work, authors have studied the theoretical model of two-dimensional ciliary flow of blood-based (Eyring-Powell) nanofluid model with the insertion of ternary hybrid nanoparticles along with the effects of electroosmosis, magnetohydrodynamics, thermal radiations, and mixed convection. Moreover, the features of entropy generation are also taken into consideration. The system is modeled in a wave frame with the approximations of large wave number and neglecting turbulence effects. The problem is solved numerically by using the shooting method with the assistance of computational software "Mathematica" for solving the governing equation. According to the temperature curves, the temperature will increase as the Hartman number, fluid factor, ohmic heating, and cilia length increase. It is also disclosed that ternary hybrid nanoparticles result in a change in flow rate when other problem parameters are varied, and the same is true for temperature graphs. Engineers and scientists can make better use of nanofluid-based cooling systems in electronics, automobiles, and industrial processes with the aid of the study's findings.

DC Electric Fields Promote Biodegradation of Waterborne Naphthalene in Biofilter Systems.

Biofiltration is a simple and low-cost method for the cleanup of contaminated water. However, the reduced availability of dissolved chemicals to surface-attached degrader bacteria may limit its efficient use at certain hydraulic loadings. When a direct current (DC) electric field is applied to an immersed packed bed, it invokes electrokinetic processes, such as electroosmotic water flow (EOF). EOF is a surface-charge-induced plug-flow-shaped movement of pore fluids. It acts at a nanometer distance above surfaces and allows the change of microscale pressure-driven flow profiles and, hence, the availability of dissolved contaminants to microbial degraders. In laboratory percolation columns, we assessed the effects of a weak DC electric field (E = 0.5 V·cm-1) on the biodegradation of waterborne naphthalene (NAH) by surface-attached Pseudomonas fluorescens LP6a. To vary NAH bioavailability, we used different NAH concentrations (C0 = 2.7, 5.1, or 7.8 × 10-5 mol·L-1) and Darcy velocities typical for biofiltration (U¯ = 0.2-1.2 × 10-4 m·s-1). In DC-free controls, we observed higher specific degradation rates (qc) at higher NAH concentrations. The qc depended on U¯, suggesting bioavailability restrictions depending on the hydraulic residence times. DC fields consistently increased qc and resulted in linearly increasing benefits up to 55% with rising hydraulic loadings relative to controls. We explain these biodegradation benefits by EOF-altered microscale flow profiles allowing for better NAH provision to bacteria attached to the collectors even though the EOF was calculated to be 100-800 times smaller than bulk water flow. Our data suggest that electrokinetic approaches may give rise to future technical applications that allow regulating biodegradation, for example, in response to fluctuating hydraulic loadings.

A novel test set up to study three-dimensional electrokinetic dewatering of dredged soil.

The dredged soil obtained from maintenance activities of water bodies has emerged as a potential alternate fill material for infrastructure development. However, dredged soil requires stabilization due to high initial water content, low shear strength and high compressibility. Among several methods, stabilization of dredged soil by using electrokinetics is one of the effective ground improvement techniques that uses electric field to dewater and strengthen the soil. In this context, a series of experiments were conducted on dredged soil by using a combination of electrokinetic treatment with and without 6 kPa seating pressure (viz., low surcharge). A customized and patented electrokinetic dewatering (EKD) test set up was used for the three-dimensional electrokinetic treatment of soil. The potential difference (in the range of 6 V-48 V) within the soil was achieved by inserting stainless steel pipes of 21.4 mm outer diameter, 1.2 mm thickness, and 170 mm length. Two control tests (with and without seating pressure of 6 kPa) also were performed to understand the effectiveness of EKD. From the study, up to 1057% and 427% increase in dewatering was noted in EKD tests due to application of 24 V (optimum voltage noted in EKD tests) as compared to control tests, without and with seating pressure, respectively. Further, seating pressure with EKD resulted in effective control of crack formation in the dredged soil and uniform improvement in shear strength along the depth (up to 95 kPa). The combination of low surcharge with EKD, adopted in the study, is also expected to yield lower differential settlement, and hence better performance of geotechnical structures built on improved dredged soil. The novel 3-dimensional patented EKD test setup with Arduino-programmed automatic water pumping enables collecting and accurately measuring dewatered effluent volume, performing cone penetration tests on undisturbed soil, and collecting soil samples for determination of water content/physiochemical properties from different locations. Overall, the developed EKD setup can be utilized for evaluating the effectiveness and adopting real-time progress management for EKD or other ground improvement methods, and remediation of sludge, mine tailings, dredged sediments, and contaminated soils.

Electroosmotic flow in fused deposition modeling (FDM) 3D-printed microchannels.

Electroosmotic flow (EOF) was determined in tridimensional (3D)-printed microchannels with dimensions smaller than 100 µm. Fused deposition modeling 3D printing using thermoplastic filaments of PETG (polyethylene terephthalate glycol), PLA (polylactic acid), and ABS (acrylonitrile butadiene styrene) were used to fabricate the microchannels. The current monitoring method and sodium phosphate solutions at different pH values (3-10) were used for the EOF mobility (µEOF ) measurements, which ranged from 2.00 × 10-4 to 12.52 × 10-4  cm2  V-1  s-1 . The highest and the smallest µEOF were obtained for the PLA and PETG microchannels, respectively. Adding the cationic surfactant cetyltrimethylammonium bromide to the sodium phosphate solution caused EOF direction reversion in all the studied microchannels. The obtained results can be interesting for developing 3D-printed microfluidic devices, in which EOF is relevant.

Electroosmotic flow of cobalt-ferrite nanoparticles in water and ethylene glycol through a ciliary annulus: A biomedical application.

Unique magnetic characteristics of cobalt-ferrite nanoparticles make them suitable for biological imaging and therapeutic applications. Understanding their activity in nanofluids via the ciliary annulus could lead to better contrast agents for magnetic resonance imaging and improved cancer therapy and other medical therapies. This article provides a comprehensive analysis of the theoretical conclusions regarding the transport of a nanofluid by electroosmosis across a ciliary annulus. The nanofluid consists of cobalt-ferrite nanoparticles (CoFe2 O4 ), water (H2 O), and ethylene glycol (C2 H6 O2 ). As part of the investigation into constructing a physical model, mathematical analysis is performed based on the conservation of mass, momentum, and energy. Dimension-free analysis and mathematical constraints are utilized to learn more about the system. By generating differential equations and including suitable boundary conditions, one can obtain exact solutions, which can then be visually inspected. Recent studies have demonstrated an inverse relationship between flow velocity and cilia length, zeta potential, and Helmholtz-Smoluchowski velocity. The streamlines show that the growth of the trapping boluses is affected by several factors, including the nanoparticles' volume fraction, the cilia's length, the amplitude ratio, the eccentricity, and the zeta potential. These results not only shed light on how nanofluids move, but they also have potential applications in microfluidics, heat transfer, and biomedical engineering.

An entropy model for Carreau nanofluid ciliary flow with electroosmosis and thermal radiations: A numerical study.

In order to localize heat production and drug activation, it is possible for drug delivery to make use of nanofluids containing thermal radiation. By limiting the amount of medication that is administered to healthy tissues, this approach increases drug distribution. We explore the effect that thermal radiation has on the flow of a ternary-hybrid nanofluid composed of titanium oxide (TiO2 ), silica (SiO2 ), and aluminum oxide (AI2 O3 ). The base liquid that we use for our Carreau constitutive model is blood. Entropy and electroosmosis are both taken into account when the conduit is connected to the battery terminals outside. Following the step of translating the observation model into a wave frame, the physical restrictions of the lubrication theory are used in order to provide a more complete explanation for the wave occurrences. In this work, shooting is used to simulate boundary value issues that are solved with Mathematica NDSolve. The production of the least amount of entropy and a rise in thermodynamic efficiency are achieved by the motion of cilia and elastic electroosmotic pumping. It is also observed that heat transfer is proportional to the length of cilia. Nusselt number is increased by large cilia but skin friction got a reduction.

Chip for dielectrophoretic microbial capture, separation and detection II: experimental study.

In our previous paper we have modelled a dielectrophoretic force (DEP) and cell particle behavior in a microfluidic channel (Weber MUet al2023 Chip for dielectrophoretic microbial capture, separation and detection I: theoretical basis of electrode designNanotechnologythis issue). Here we test and confirm the results of our modeling work by experimentally validating the theoretical design constraints of the ring electrode architecture. We have compared and tested the geometry and particle capture and separation performance of the two separate electrode designs (the ring and dot electrode structures) by investigating bacterial motion in response to the applied electric field. We have quantitatively evaluated the electroosmosis (EO) to positive DEP (PDEP) transition in both electrode designs and explained the differences in capture efficiency of the ring and dot electrode systems. The ring structure shows 99% efficiency of bacterial capture both for PDEP and for EO. Moreover, the ring structure shows an over 200 faster bacterial response to the electric field. We have also established that the ring electrode architecture, with appropriate structure periodicity and spacing, results in efficient capture and separation of microbial cells. We have identified several critical design constraints that are required to achieve high efficiency bacterial capture. We have established that the spacing between consecutive DEP traps smaller than the length of the depletion zone will ensure that the DEP force dominates bacterial motion over motility and Brownian motion.

Electrothermal transport of water conveying copper, silver and alumina nanoparticles through a vertical wavy microchannel.

This study emphasizes the significance of optimizing heat transmission, energy conversion, and thermal management in electronic devices, renewable energy systems, and emerging technologies like thermoelectric devices and energy storage systems. The aim is to enhance heat transfer efficiency for improved performance and lifespan of electronic equipment. The research utilizes a mathematical flow analysis to study a water-based ternary nanofluid's flow and thermal characteristics in a vertical microfluidic channel driven by peristalsis and electroosmosis. The ternary-hybrid nanofluid (THNF), comprising copper, silver, and alumina nanoparticles dissolved in water, is examined considering induced magnetic fields. The study delves into fluid flow, heat absorption, and mixed convection, using Debye-Hückel, lubrication, and long wavelength approximations. Results show that THNF exhibits superior heat transmission compared to pure water. Increasing solid volume fraction of nanoparticles decreases THNF's temperature. Induced magnetic fields impact the system. This research could influence thermal pipe heat sinks and bioengineered medical devices design.

Numerical solutions for the treatment brine by diffusive and migration flux using new brine-clay-seawater system.

With the growing world population and industrial production, the demand for water has been continuously increasing. By 2030, 60.0% of the world population will not have access to freshwater, which is ∼2.50% of the total global water. For this, a total of over 17,000 operational desalination plants have been constructed worldwide. However, the key barrier to desalination expansion is brine production, which is 50.0% higher than the freshwater, generating 5.0-33.0% of total desalination cost. In this paper, a new theoretical approach for brine treatments has been proposed. It consists in combining electrokinetic and electrochemical mechanisms by using an alkaline clay with high buffering power. Advanced numerical model has been carried out to estimate the ions concentrations in the brine-clay-seawater system. Analytical analyses have been also carried out to estimate the global system efficiency. Results show the feasibility of the theoretical system, its size, and usability of the clay. This model not only should clean the brine to produce new treated seawater but also it should recover useful minerals thank to the electrolysis and precipitations effects.

Investigating protein translocation in the presence of an electrolyte concentration gradient across a solid-state nanopore.

Electrolyte chemistry plays an important role in the transport properties of analytes through nanopores. Here, we report the translocation properties of the protein human serum transferrin (hSTf) in asymmetric LiCl salt concentrations with either positive (Ctrans /Ccis < 1) or negative chemical gradients (Ctrans /Ccis > 1). The cis side concentration was fixed at 4 M for positive chemical gradients and at 0.5 M LiCl for negative chemical gradients, while the trans side concentration varied between 0.5 to 4 M which resulted in six different configurations, respectively, for both positive and negative gradient types. For positive chemical gradient conditions, translocations were observed in all six configurations for at least one voltage polarity whereas with negative gradient conditions, dead concentrations where no events at either polarity were observed. The flux of Li+ and Cl- ions and their resultant cation or anion enrichment zones, as well as the interplay of electrophoretic and electroosmotic transport directions, would determine whether hSTf can traverse across the pore.

AC electrokinetic immobilization of influenza virus.

The use of alternating current (AC) electrokinetic forces, like dielectrophoresis and AC electroosmosis, as a simple and fast method to immobilize sub-micrometer objects onto nanoelectrode arrays is presented. Due to its medical relevance, the influenza virus is chosen as a model organism. One of the outstanding features is that the immobilization of viral material to the electrodes can be achieved permanently, allowing subsequent handling independently from the electrical setup. Thus, by using merely electric fields, we demonstrate that the need of prior chemical surface modification could become obsolete. The accumulation of viral material over time is observed by fluorescence microscopy. The influences of side effects like electrothermal fluid flow, causing a fluid motion above the electrodes and causing an intensity gradient within the electrode array, are discussed. Due to the improved resolution by combining fluorescence microscopy with deconvolution, it is shown that the viral material is mainly drawn to the electrode edge and to a lesser extent to the electrode surface. Finally, areas of application for this functionalization technique are presented.

A systematic overview of electrode configuration in electric-driven micropumps.

Accurate manipulation of fluids in microfluidic devices is an important factor affecting their functions. Since the emergence of microfluidic technology to transport fluids in microchannels, the electric field has been utilized as an effective dynamic pumping mechanism. This review attempts to provide a fundamental insight of the various electric-driven flows in microchannels and their working mechanisms as micropumps for microfluidic devices. Different electrokinetic mechanisms implemented in electrohydrodynamic-, electroosmosis-, electrothermal, and dielectrophoresis-based micropumps are discussed. A detailed description of different mechanisms is presented to provide a comprehensive overview on the key parameters used in electric micropumps. Furthermore, electrode configurations and their shapes in different micropumps are explored and categorized to provide conclusive information for the selection of efficient, simple, and affordable strategies to transport fluids in microfluidic devices. In this paper, recent theoretical, numerical and experimental investigations are covered to provide a better insight both on the operational mechanisms and strategies for lab-on-chip applications.

Rheology-modulated alterations in electro-magneto-hydrodynamic flows in a narrow cylindrical capillary: Contrasting trends in high and low surface charge limits.

We investigate electrokinetic transport of power-law fluids in a narrow cylindrical capillary in the presence of a transverse magnetic field. The governing equations including the full Poisson-Boltzmann equation and the Cauchy momentum equation with power-law constitutive behavior are solved numerically, without being restrictive to low surface potential limits. The influence of the power-law index, wall zeta potential, relative strength of electromagnetic force over viscous force (as represented by the Hartmann number), and the lateral electric field strength on the variation of the volumetric flow rate is analyzed. Our results reveal a significant augmentation in the net-throughput beyond the traditionally explored low surface-charge limits, especially for shear-thinning fluids, defying the established notions. These fundamental theoretical premises may act as essential precursors towards developing deeper insights on fluidic transport bio-nanopores under electro-magneto- hydrodynamic influences.

Fluid rheological effects on streaming dielectrophoresis in a post-array microchannel.

Recent studies have demonstrated the strong influences of fluid rheological properties on insulator-based dielectrophoresis (iDEP) in single-constriction microchannels. However, it is yet to be understood how iDEP in non-Newtonian fluids depends on the geometry of insulating structures. We report in this work an experimental study of fluid rheological effects on streaming DEP in a post-array microchannel that presents multiple contractions and expansions. The iDEP focusing and trapping of particles in a viscoelastic polyethylene oxide solution are comparable to those in a Newtonian buffer, which is consistent with the observations in a single-constriction microchannel. Similarly, the insignificant iDEP effects in a shear-thinning xanthan gum solution also agree with those in the single-constriction channel except that gel-like structures are observed to only form in the post-array microchannel under large DC electric fields. In contrast, the iDEP effects in both viscoelastic and shear-thinning polyacrylamide solution are significantly weaker than in the single-constriction channel. Moreover, instabilities occur in the electroosmotic flow and appear to be only dependent on the DC electric field. These phenomena may be associated with the dynamics of polymers as they are electrokinetically advected around and through the posts.

Effect of skimming layer in an electroosmotically driven viscoelastic fluid flow over charge modulated walls.

We report a numerical study on the effect of the skimming layer in an EOF of Oldroyd-B fluid over charge modulated walls. Three types of flow conditions were identified on the basis of the relative thickness of the skimming layer and the electrical double layer. We observe maximum slip velocity magnitude when the skimming layer thickness is very less than the thickness of the electrical double layer. For higher skimming layer thickness compared to the thickness of electrical double layer, slip velocity magnitude attenuates, and the polymeric stress inside the skimming layer becomes zero. Enhanced fluid elasticity generates asymmetric flow structures inside the microchannel, which can also be achieved by imposing an asymmetric surface charge along the channel walls. Our present analysis highlights the complex flow dynamics of the EOF of biofluids/polymeric fluids with a near-wall region depleted of macro-molecules.

Short communication: A simple and accurate method of measuring the zeta-potential of microfluidic channels.

We describe an improved method for determining the electroosmotic mobility and zeta potential of surfaces based on a current-monitoring method. This technique eliminates the requirement for measurements of channel dimensions and sample conductivities, leading to a simple high precision measurement. The zeta potential of PDMS is measured for native surfaces and surfaces treated with a nonionic surfactant in low-conductivity electrolytes.