Assessing the suitability of a one-time sampling event for close-kin mark-recapture: A caribou case study.

Abundance estimation is frequently an objective of conservation and monitoring initiatives for threatened and other managed populations. While abundance estimation via capture-mark-recapture or spatially explicit capture-recapture is now common, such approaches are logistically challenging and expensive for species such as boreal caribou (Rangifer tarandus), which inhabit remote regions, are widely dispersed, and exist at low densities. Fortunately, the recently developed 'close-kin mark-recapture' (CKMR) framework, which uses the number of kin pairs obtained within a sample to generate an abundance estimate, eliminates the need for multiple sampling events. As a result, some caribou managers are interested in using this method to generate an abundance estimate from a single, non-invasive sampling event for caribou populations. We conducted a simulation study using realistic boreal caribou demographic rates and population sizes to assess how population size and the proportion of the population surveyed impact the accuracy and precision of single-survey CKMR-based abundance estimates. Our results indicated that abundance estimates were biased and highly imprecise when very small proportions of the population were sampled, regardless of the population size. However, the larger the population size, the smaller the required proportion of the population surveyed to generate both accurate and reasonably precise estimates. Additionally, we also present a case study in which we used the CKMR framework to generate annual female abundance estimates for a small caribou population in Jasper National Park, Alberta, Canada, from 2006 to 2015 and compared them to existing published capture-mark-recapture-based estimates. Both the accuracy and precision of the annual CKMR-based abundance estimates varied across years and were sensitive to the proportion of pairwise kinship comparisons which yielded a mother-offspring pair. Taken together, our study demonstrates that it is possible to generate CKMR-based abundance estimates from a single sampling event for small caribou populations, so long as a sufficient sampling intensity can be achieved.

Microplastics as contaminants in Indian environment: a review.

The increased production and consumption scale of plastic items has led to the generation of microplastics (MPs), an emerging class of contaminants, in our environment. MPs are plastic particles less than 5 mm in size and could originate due to primary and secondary sources. The primary ones are generated as such in the MP size range while the secondary MPs are a result of fragmentation of larger plastic particles which eventually enters the aquatic, terrestrial and atmospheric environments. The increasing concern of MP pollution in every compartment of our environment is being globally explored, with relatively fewer studies in India. Among the total studies published on MP prevalence in the Indian environments, marine systems have received significantly higher attention compared to the other compartments like freshwater, atmosphere, terrestrial and human consumables. This review article is an effort to present current understanding of MP pollution in aquatic systems, terrestrial systems, atmosphere and human consumables of India by reviewing available scientific literature. Along with this, the review also focuses on identification of the gap areas in current knowledge and highlights way forward for future research. This would further help in meeting the goals of this emergent pollutant management.

Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems.

Protists dominate eukaryotic diversity and play key functional roles in all ecosystems, particularly by catalyzing carbon and nutrient cycling. To date, however, a comparative analysis of their taxonomic and functional diversity that compares the major ecosystems on Earth (soil, freshwater and marine systems) is missing. Here, we present a comparison of protist diversity based on standardized high throughput 18S rRNA gene sequencing of soil, freshwater and marine environmental DNA. Soil and freshwater protist communities were more similar to each other than to marine protist communities, with virtually no overlap of Operational Taxonomic Units (OTUs) between terrestrial and marine habitats. Soil protists showed higher γ diversity than aquatic samples. Differences in taxonomic composition of the communities led to changes in a functional diversity among ecosystems, as expressed in relative abundance of consumers, phototrophs and parasites. Phototrophs (eukaryotic algae) dominated freshwater systems (49% of the sequences) and consumers soil and marine ecosystems (59% and 48%, respectively). The individual functional groups were composed of ecosystem- specific taxonomic groups. Parasites were equally common in all ecosystems, yet, terrestrial systems hosted more OTUs assigned to parasites of macro-organisms while aquatic systems contained mostly microbial parasitoids. Together, we show biogeographic patterns of protist diversity across major ecosystems on Earth, preparing the way for more focused studies that will help understanding the multiple roles of protists in the biosphere.

Diatoms from small ponds and terrestrial habitats in Deserta Grande Island (Madeira Archipelago).

BACKGROUND: Freshwater diversity, and diatoms in particular, from Desertas Islands (Madeira Archipelago, Portugal) is poorly known, although the Islands are protected and became a Natural Reserve in 1995. During two field expeditions in 2013 and 2014 to Deserta Grande Island, several freshwater and terrestrial habitats were sampled. The analysis of these samples aims to contribute to the biodiversity assessment of the freshwater biota present in Deserta Grande Island. Here, we present the diatom diversity in Deserta Grande Island resulting from that survey. This study contributes to improve the knowledge of Madeira Archipelago freshwater diversity, particularly in the Desertas sub-archipelago. NEW INFORMATION: To our knowledge, we present the first diatom data for the Desertas sub-archipelago. This work resulted in a list of 60 diatom taxa for Deserta Grande, from which 57 were identified to species level. From the 60 new records for Desertas sub-archipelago, 30 of them were also new records for Madeira Archipelago. Several specimens could not be assigned to a known species and may be new diatom species not yet described.

Fate of Triclocarban (TCC) in aquatic and terrestrial systems and human exposure.

Triclocarban (TCC) is considered as contaminant of emerging concern (CEC), and ranked in the top 10 CEC occurrence. TCC is a high production volume synthetic chemical used extensively in various personal care products. This chemical will be released into the environment via incomplete wastewater treatment and untreated wastewater discharge. TCC and its transformation products (4,4'-dichlorocarbilide (DCC),1-(3-chlorophenyl)-3-phenylurea (MCC) and carbanilide (NCC),2'OH-TCC, 3'OH-TCC) were detected in the environmental matrices. Sediment organic carbon will influence TCC concentrations in suspended and bed sediments. TCC is an antimicrobial agent and also emerging endocrine disruptor that can cause immune dysfunction and affect human reproductive outcomes. Furthermore, TCC alters the expression of proteins related to binding and metabolism, skeletal muscle development and function, nervous system development and immune response. TCC has potential health risks in wildlife and humans. Several animal studies illustrate that it can cause various adverse effects, which can be monitored by antioxidant biomarkers (CAT, GST and LPO). Accumulation of TCC in organisms depends on the lipophilicity and bioavailability of TCC in sediment and water. TCC was continuously detected in aquatic system. TCC is a lipophilic compound, which can efficiently bind with lipid content. Women are more vulnerable to TCC due to substantially higher frequency and extended exposure to TCC. This review provides basic information of occurrence of TCC and the exposure levels in aquatic organisms. Several literature have shown the higher usage and human exposure levels of TCC, which provides useful information for the chemical management approaches.

Mayflies (Ephemeroptera) and Their Contributions to Ecosystem Services.

This work is intended as a general and concise overview of Ephemeroptera biology, diversity, and services provided to humans and other parts of our global array of freshwater and terrestrial ecosystems. The Ephemeroptera, or mayflies, are a small but diverse order of amphinotic insects associated with liquid freshwater worldwide. They are nearly cosmopolitan, except for Antarctica and some very remote islands. The existence of the subimago stage is unique among extant insects. Though the winged stages do not have functional mouthparts or digestive systems, the larval, or nymphal, stages have a variety of feeding approaches-including, but not limited to, collector-gatherers, filterers, scrapers, and active predators-with each supported by a diversity of morphological and behavioral adaptations. Mayflies provide direct and indirect services to humans and other parts of both freshwater and terrestrial ecosystems. In terms of cultural services, they have provided inspiration to musicians, poets, and other writers, as well as being the namesakes of various water- and aircraft. They are commemorated by festivals worldwide. Mayflies are especially important to fishing. Mayflies contribute to the provisioning services of ecosystems in that they are utilized as food by human cultures worldwide (having one of the highest protein contents of any edible insect), as laboratory organisms, and as a potential source of antitumor molecules. They provide regulatory services through their cleaning of freshwater. They provide many essential supporting services for ecosystems such as bioturbation, bioirrigation, decomposition, nutrition for many kinds of non-human animals, nutrient cycling and spiraling in freshwaters, nutrient cycling between aquatic and terrestrial systems, habitat for other organisms, and serving as indicators of ecosystem health. About 20% of mayfly species worldwide might have a threatened conservation status due to influences from pollution, invasive alien species, habitat loss and degradation, and climate change. Even mitigation of negative influences has benefits and tradeoffs, as, in several cases, sustainable energy production negatively impacts mayflies.

Microplastics accumulate on pores in seed capsule and delay germination and root growth of the terrestrial vascular plant Lepidium sativum.

The impacts of nano- and microplastics (<100 nm and <5 mm, respectively) on terrestrial systems is to the present largely unexplored. Plastic particles are likely to accumulate in these systems primarily by the application of sewage sludge. The aim of the current study was to investigate the effects of three sizes of plastic particles (50, 500, and 4800 nm) on a terrestrial plant (cress; Lepidium sativum), using a standardized 72 h bioassay. Cress seeds were exposed to five different concentrations of plastics, ranging from 103 to 107 particles mL-1. Germination rate was significantly reduced after 8 h of exposure for all three sizes of plastics, with increased adverse effect with increasing plastic sizes. Seeds exposed to 4800 nm microplastics showed a germination rate decline from 78% in control to 17% in the highest exposure. No difference in germination rate occurred after 24 h of exposure, regardless of the size of the plastic used. Significant differences in root growth were observed after 24 h, but not after 48 or 72 h of exposure. Impacts on germination are likely due to physical blockage of the pores in the seed capsule by microplastics as shown by confocal microscopy of fluorescent microplastics. In later stages, the microplastics particularly accumulated on the root hairs. This is the first detailed study on the effect of nano- and microplastics on a vascular, terrestrial plant, and our results indicate short-term and transient adverse effects.