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1.
Protein Expr Purif ; 174: 105682, 2020 10.
Artigo em Inglês | MEDLINE | ID: mdl-32502709

RESUMO

Canine parvovirus (CPV) non-structural protein-1 (NS1) plays crucial roles in CPV replication and transcription, as well as pathogenic effects to the host. However, the mechanism was not fully understood. Lack of NS1 antibody is one of the restricting factors for NS1 function investigation. To prepare NS1 monoclonal antibody (mAb), the NS1 epitope (AA461 ~ AA650) gene was amplified by PCR, and inserted into pGEX-4T-1vector to construct the prokaryotic expression vector of GST-tag-fused NS1 epitope gene. The NS1 fusion protein was expressed in E. coli, and purified with GSH-magnetic beads, and then used to immunize BALB/c mice. The mouse splenic lymphocytes were isolated and fused with myeloma cells (SP 2/0) to generate hybridoma cells. After several rounds of screening by ELISA, a hybridoma cell clone (1B8) stably expressing NS1 mAb was developed. A large amount of NS1 mAb was prepared from mouse ascites fluid. The isotype of NS1 mAb was identified as IgG1, which can specifically bind NS1 protein in either CPV-infected cells or NS1 vector-transfected cells, indicating the NS1 mAb is effective in detecting NS1 protein. Meanwhile, we used the NS1 mAb to investigate NS1 dynamic changes by qRT-PCR and location by confocal imaging in CPV-infected host cells and showed that NS1 began to appear in the cells at 12 h after CPV infection and reached the highest level at 42 h, NS1 protein was mainly located in nucleus of the cells. This study provided a necessary condition for further investigation on molecular mechanism of NS1 function and pathogenicity.


Assuntos
Anticorpos Monoclonais Murinos , Anticorpos Antivirais , Epitopos , Infecções por Parvoviridae , Parvovirus Canino , Proteínas não Estruturais Virais , Animais , Anticorpos Monoclonais Murinos/química , Anticorpos Monoclonais Murinos/imunologia , Anticorpos Antivirais/química , Anticorpos Antivirais/imunologia , Linhagem Celular , Epitopos/química , Epitopos/genética , Epitopos/imunologia , Epitopos/metabolismo , Feminino , Camundongos , Camundongos Endogâmicos BALB C , Infecções por Parvoviridae/imunologia , Infecções por Parvoviridae/metabolismo , Parvovirus Canino/química , Parvovirus Canino/genética , Parvovirus Canino/imunologia , Parvovirus Canino/metabolismo , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/imunologia , Proteínas não Estruturais Virais/química , Proteínas não Estruturais Virais/genética , Proteínas não Estruturais Virais/imunologia , Proteínas não Estruturais Virais/metabolismo
2.
J Am Chem Soc ; 140(46): 15701-15711, 2018 11 21.
Artigo em Inglês | MEDLINE | ID: mdl-30398860

RESUMO

There are many techniques for monitoring and measuring the interactions between proteins and ligands. Most of these techniques are ensemble methods that can provide association constants and in some cases stoichiometry. Here we use charge detection mass spectrometry (CDMS), a single particle technique, to probe the interactions of antigen binding fragments (Fabs) from a series of antibodies with the canine parvovirus (CPV) capsid. In addition to providing the average number of bound Fabs as a function of Fab concentration (i.e., the binding curve), CDMS measurements provide information about the distribution of bound Fabs. We show that the distribution of bound ligands is much better at distinguishing between different binding models than the binding curve. The binding of Fab E to CPV is a textbook example. A maximum of 60 Fabs bind and the results are consistent with a model where all sites have the same binding affinity. However, for Fabs B, F, and 14, the distributions can only be fit by a model where there are distinct virus subpopulations with different binding affinities. This behavior can be distinguished from a situation where all CPV particles are identical, and each particle has the same distribution of sites with different binding affinities. The different responses to viral heterogeneity can be traced to the Fab binding sites. A comparison of Fab binding to new and aged CPV capsids reveals that a post-translational modification at the binding site for Fab E (M569) probably reduces the binding affinity.


Assuntos
Anticorpos Antivirais/química , Capsídeo/química , Fragmentos Fab das Imunoglobulinas/química , Parvovirus Canino/química , Anticorpos Antivirais/imunologia , Reações Antígeno-Anticorpo , Sítios de Ligação , Capsídeo/imunologia , Fragmentos Fab das Imunoglobulinas/imunologia , Espectrometria de Massas , Parvovirus Canino/imunologia
3.
J Virol ; 89(3): 1909-12, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25410876

RESUMO

Canine parvovirus type 2 (CPV-2) emerged in 1978 and spread worldwide within 2 years. Subsequently, CPV-2 was completely replaced by the variant CPV-2a, which is characterized by four specific capsid (VP2) mutations. The X-ray crystal structure of the CPV-2a capsid shows that each mutation confers small local changes. The loss of a hydrogen bond and introduction of a glycine residue likely introduce flexibility to sites that control interactions with the host receptor, antibodies, and sialic acids.


Assuntos
Doenças do Cão/virologia , Especificidade de Hospedeiro , Infecções por Parvoviridae/veterinária , Parvovirus Canino/fisiologia , Animais , Proteínas do Capsídeo/química , Cristalografia por Raios X , Doenças do Cão/epidemiologia , Cães , Modelos Moleculares , Proteínas Mutantes/química , Pandemias , Infecções por Parvoviridae/epidemiologia , Infecções por Parvoviridae/virologia , Parvovirus Canino/química , Parvovirus Canino/isolamento & purificação , Conformação Proteica
4.
Tumour Biol ; 37(9): 12089-12102, 2016 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-27209409

RESUMO

The canine parvovirus NS1 (CPV2.NS1) protein selectively induces apoptosis in the malignant cells. However, for an effective in vivo tumor treatment strategy, an oncolytic agent also needs to induce a potent anti-tumor immune response. In the present study, we used poly (I:C), a TLR3 ligand, as an adjuvant along with CPV2.NS1 to find out if the combination can enhance the oncolytic activity by inducing a potent anti-tumor immune response. The 4T1 mammary carcinoma cells were used to induce mammary tumor in Balb/c mice. The results suggested that poly (I:C), when given along with CPV2.NS1, not only significantly reduced the tumor growth but also augmented the immune response against tumor antigen(s) as indicated by the increase in blood CD4+ and CD8+ counts and infiltration of immune cells in the tumor tissue. Further, blood serum analysis of the cytokines revealed that Th1 cytokines (IFN-γ and IL-2) were significantly upregulated in the treatment group indicating activation of cell-mediated immune response. The present study reports the efficacy of CPV2.NS1 along with poly (I:C) not only in inhibiting the mammary tumor growth but also in generating an active anti-tumor immune response without any visible toxicity. The results of our study may help in developing CPV2.NS1 and poly (I: C) combination as a cancer therapeutic regime to treat various malignancies.


Assuntos
Antineoplásicos/farmacologia , Neoplasias Mamárias Experimentais/tratamento farmacológico , Parvovirus Canino/química , Poli I-C/farmacologia , Proteínas não Estruturais Virais/farmacologia , Animais , Apoptose , Citocinas/sangue , Feminino , Humanos , Neoplasias Mamárias Experimentais/imunologia , Neoplasias Mamárias Experimentais/patologia , Camundongos , Camundongos Endogâmicos BALB C , Neovascularização Fisiológica , Linfócitos T Citotóxicos/imunologia , Células Th1/imunologia
5.
J Biomed Sci ; 22: 89, 2015 Oct 20.
Artigo em Inglês | MEDLINE | ID: mdl-26482775

RESUMO

BACKGROUND: Canine parvovirus 2 (CPV-2) remains a significant worldwide canine pathogen and the most common cause of viral enteritis in dogs. The 1 L15 and 7 L15 peptides overlap each other with QPDGGQPAV residues (7-15 of VP2 capsid protein of CPV) is shown to produce high immune response. PLGA nanoparticles were demonstrated to have special properties such as; controlled antigen release, protection from degradation, elimination of booster-dose and enhancing the cellular uptake by antigen presenting cells. Nevertheless, there is no study available in literature, about developing vaccine based on PLGA nanoparticles with adjuvant properties against CPV. Thus, the aim of the present study was to synthesize and characterize high immunogenic W-1 L19 peptide (from the VP2 capsid protein of CPV) loaded PLGA nanoparticle and to evaluate their in vitro immunogenic activity. RESULTS: PLGA nanoparticles were produced with 5.26 ± 0.05 % loading capacity and high encapsulation efficiency with 81.2 ± 3.1 %. Additionally, it was evaluated that free NPs and W-1 L19 peptide encapsulated PLGA nanoparticles have Z-ave of 183.9 ± 12.1 nm, 221.7 ± 15.8 nm and polydispersity index of 0.107 ± 0.08, 0.135 ± 0.12 respectively. It was determined that peptide loaded PLGA nanoparticles were successfully phagocytized by macrophage cells and increased NO production at 2-folds (*P < 0.05) in contrast to free peptide, and 3-folds (*P < 0.01) in contrast to control. CONCLUSION: In conclusion, for the first time, W-1 L19 peptide loaded PLGA nanoparticles were successfully synthesized and immunogenic properties evaluated. Obtained results showed that PLGA nanoparticles enhanced the capacity of W-1 L19 peptide to induce nitric oxide production in vitro due to its adjuvant properties. Depend on the obtained results, these nanoparticles can be accepted as potential vaccine candidate against Canine Parvovirus. Studies targeting PLGA nanoparticles based delivery system must be maintained in near future in order to develop new and more effective nano-vaccine formulations.


Assuntos
Ácido Láctico/química , Nanopartículas/química , Parvovirus Canino/química , Peptídeos/química , Ácido Poliglicólico/química , Animais , Linhagem Celular , Cães , Camundongos , Copolímero de Ácido Poliláctico e Ácido Poliglicólico
6.
Braz J Microbiol ; 55(3): 2953-2968, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39060911

RESUMO

Canine parvovirus (CPV-2) is a highly contagious virus affecting dogs worldwide, posing a significant threat. The VP2 protein stands out as the predominant and highly immunogenic structural component of CPV-2. Soon after its emergence, CPV-2 was replaced by variants known as CPV-2a, 2b and 2c, marked by changes in amino acid residue 426 of VP2. Additional amino acid alterations have been identified within VP2, with certain modifications serving as signatures of emerging variants. In Brazil, CPV-2 outbreaks persist with diverse VP2 profiles. Vaccination is the main preventive measure against the virus. However, the emergence of substitutions presents challenges to conventional vaccine methods. Commercial vaccines are formulated with strains that usually do not match those currently circulating in the field. To address this, the study aimed to investigate CPV-2 variants in Brazil, predict epitopes, and design an in silico vaccine tailored to local variants employing reverse vaccinology. The methodology involved data collection, genetic sequence analysis, and amino acid comparison between field strains and vaccines, followed by the prediction of B and T cell epitope regions. The predicted epitopes were evaluated for antigenicity, allergenicity and toxicity. The final vaccine construct consisted of selected epitopes linked to an adjuvant and optimized for expression in Escherichia coli. Structural predictions confirmed the stability and antigenicity of the vaccine, while molecular docking demonstrated interaction with the canine toll-like receptor 4. Molecular dynamics simulations indicated a stable complex formation. In silico immune simulations demonstrated a progressive immune response post-vaccination, including increased antibody production and T-helper cell activity. The multi-epitope vaccine design targeted prevalent CPV-2 variants in Brazil and potentially other regions globally. However, experimental validation is essential to confirm our in silico findings.


Assuntos
Simulação por Computador , Doenças do Cão , Infecções por Parvoviridae , Parvovirus Canino , Vacinas Virais , Parvovirus Canino/imunologia , Parvovirus Canino/genética , Parvovirus Canino/química , Animais , Cães , Doenças do Cão/prevenção & controle , Doenças do Cão/imunologia , Doenças do Cão/virologia , Infecções por Parvoviridae/prevenção & controle , Infecções por Parvoviridae/veterinária , Infecções por Parvoviridae/imunologia , Brasil , Vacinas Virais/imunologia , Vacinas Virais/genética , Vacinas Virais/química , Vacinologia/métodos , Proteínas do Capsídeo/imunologia , Proteínas do Capsídeo/genética , Proteínas do Capsídeo/química , Epitopos de Linfócito B/imunologia , Epitopos de Linfócito B/genética , Epitopos/imunologia , Epitopos/genética , Epitopos/química , Epitopos de Linfócito T/imunologia , Epitopos de Linfócito T/genética , Epitopos de Linfócito T/química
7.
Virus Genes ; 44(1): 32-9, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-21858463

RESUMO

The continuous emergence of new strains of canine parvovirus (CPV), poorly protected by current vaccination, is a concern among breeders, veterinarians, and dog owners around the world. Therefore, the understanding of the genetic variation in emerging CPV strains is crucial for the design of disease control strategies, including vaccines. In this paper, we obtained the sequences of the full-length gene encoding for the main capsid protein (VP2) of 11 canine parvovirus type 2 (CPV-2) Argentine representative field strains, selected from a total of 75 positive samples studied in our laboratory in the last 9 years. A comparative sequence analysis was performed on 9 CPV-2c, one CPV-2a, and one CPV-2b Argentine strains with respect to international strains reported in the GenBank database. In agreement with previous reports, a high degree of identity was found among CPV-2c Argentine strains (99.6-100% and 99.7-100% at nucleotide and amino acid levels, respectively). However, the appearance of a new substitution in the 440 position (T440A) in four CPV-2c Argentine strains obtained after the year 2009 gives support to the variability observed for this position located within the VP2, three-fold spike. This is the first report on the genetic characterization of the full-length VP2 gene of emerging CPV strains in South America and shows that all the Argentine CPV-2c isolates cluster together with European and North American CPV-2c strains.


Assuntos
Proteínas do Capsídeo/genética , Doenças do Cão/virologia , Evolução Molecular , Infecções por Parvoviridae/veterinária , Parvovirus Canino/genética , Sequência de Aminoácidos , Animais , Argentina , Ásia , Proteínas do Capsídeo/química , Cães , Europa (Continente) , Feminino , Variação Genética , Masculino , Dados de Sequência Molecular , Infecções por Parvoviridae/virologia , Parvovirus Canino/química , Parvovirus Canino/classificação , Parvovirus Canino/isolamento & purificação , Filogenia , Alinhamento de Sequência , América do Sul
8.
Virus Genes ; 41(1): 23-9, 2010 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-20352483

RESUMO

Canine parvovirus (CPV) causes a very severe enteric disease especially in puppies. Twenty-six isolates of CPV were obtained from dogs at the Animal Hospital, Kasetsart University, Thailand. Whole VP2 gene of 26 isolates was amplified using polymerase chain reaction (PCR) and its sequences were analyzed. Nineteen out of 26 isolates were characterized as CPV type 2a variants and the rest of the isolates were characterized as CPV type 2b. These results indicated that both types are currently prevalent field CPV circulating in Thailand and type 2a is the predominant genotype. Neither CPV type 2 nor type 2c was observed in this study.


Assuntos
Proteínas do Capsídeo/genética , Infecções por Parvoviridae/virologia , Parvovirus Canino/genética , Sequência de Aminoácidos , Animais , Proteínas do Capsídeo/química , Cães , Dados de Sequência Molecular , Parvovirus Canino/química , Parvovirus Canino/isolamento & purificação , Filogenia , Alinhamento de Sequência , Análise de Sequência de Proteína , Tailândia
9.
Biochem Biophys Res Commun ; 379(2): 562-6, 2009 Feb 06.
Artigo em Inglês | MEDLINE | ID: mdl-19118523

RESUMO

In this study canine parvovirus, CPV, was found to induce disorder in DPPC:cholesterol membranes in acidic conditions. This acidicity-induced fluidizing effect is suggested to originate from the N-terminus of the viral capsid protein VP1. In accordance with the model membrane studies, a fluidizing effect was seen also in the endosomal membranes during CPV infection implying an important functional role of the fluidization in the endocytic entry of the virus.


Assuntos
Proteínas do Capsídeo/química , Capsídeo/química , Colesterol/química , Fluidez de Membrana , Membranas Artificiais , Parvovirus Canino/química , 1,2-Dipalmitoilfosfatidilcolina/química , Concentração de Íons de Hidrogênio
10.
J Virol ; 82(21): 10397-407, 2008 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-18701590

RESUMO

Parvovirus capsids are assembled from multiple forms of a single protein and are quite stable structurally. However, in order to infect cells, conformational plasticity of the capsid is required and this likely involves the exposure of structures that are buried within the structural models. The presence of functional asymmetry in the otherwise icosahedral capsid has also been proposed. Here we examined the protein composition of canine parvovirus capsids and evaluated their structural variation and permeability by protease sensitivity, spectrofluorometry, and negative staining electron microscopy. Additional protein forms identified included an apparent smaller variant of the virus protein 1 (VP1) and a small proportion of a cleaved form of VP2. Only a small percentage of the proteins in intact capsids were cleaved by any of the proteases tested. The capsid susceptibility to proteolysis varied with temperature but new cleavages were not revealed. No global change in the capsid structure was observed by analysis of Trp fluorescence when capsids were heated between 40 degrees C and 60 degrees C. However, increased polarity of empty capsids was indicated by bis-ANS binding, something not seen for DNA-containing capsids. Removal of calcium with EGTA or exposure to pHs as low as 5.0 had little effect on the structure, but at pH 4.0 changes were revealed by proteinase K digestion. Exposure of viral DNA to the external environment started above 50 degrees C. Some negative stains showed increased permeability of empty capsids at higher temperatures, but no effects were seen after EGTA treatment.


Assuntos
Proteínas do Capsídeo/análise , Capsídeo/química , Parvovirus Canino/química , Peptídeos/análise , Capsídeo/ultraestrutura , Concentração de Íons de Hidrogênio , Microscopia Eletrônica de Transmissão , Coloração Negativa , Parvovirus Canino/ultraestrutura , Peptídeo Hidrolases/metabolismo , Espectrometria de Fluorescência , Temperatura
11.
Wei Sheng Wu Xue Bao ; 49(5): 648-52, 2009 May.
Artigo em Chinês | MEDLINE | ID: mdl-19637574

RESUMO

OBJECTIVE: To study and characterize secretive expression of canine parvovirus capsid protein 2 (VP2) gene in eukaryotic cells. METHODS: To construct secreting expression vector of VP2 gene, we obtained CD5 signal peptide (SP) DNA fragment from plasmid containing human CD5 SP DNA sequence and inserted the fragment into multiple clone site of eukaryotic expression vector pcDNA3.1A. The canine parvovirus VP2 gene was amplified by PCR and inserted into expression vector pcDNA3.1-CD5sp down stream of CD5 SP. The recombinant pcDNA-CD5sp-VP2 plasmids were transfected into HEK293T cells mediated by calcium phosphate. VP2 binding activity for canine transferrin receptor was analyzed by ELISA method. RESULTS: Recombinant pcDNA-CD5sp-VP2 plasmid proved to be correct by sequencing. VP2 proteins were detected by Western-blot in the culture medium of transfected 293T cells, which indicated that the expressed VP2 protein could be secreted into the medium mediated by human CD5 SP. VP2 protein had the activity to bind canine transferrin receptor (TfR). CONCLUSION: The secreting expression of VP2 in eukaryotic cells was achieved by using human CD5 SP. Recombinant VP2 showed the ability to bind canine TfR.


Assuntos
Proteínas do Capsídeo/metabolismo , Parvovirus Canino/genética , Transfecção , Animais , Proteínas do Capsídeo/análise , Proteínas do Capsídeo/genética , Células Cultivadas , Cricetinae , Cães , Ensaio de Imunoadsorção Enzimática , Células Eucarióticas/metabolismo , Vetores Genéticos , Humanos , Parvovirus Canino/química , Reação em Cadeia da Polimerase , Receptores da Transferrina/metabolismo
12.
Virus Res ; 132(1-2): 187-91, 2008 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-18045720

RESUMO

One of the essential steps in canine parvovirus (CPV) infection, the release from endosomal vesicles, is dominated by interactions between the virus capsid and the endosomal membranes. In this study, the effect of sphingomyelin and phosphatidyl serine on canine parvovirus capsid and on the phospholipase A(2) (PLA(2)) activity of CPV VP1 unique N-terminus was analyzed. Accordingly, a significant (P< or =0.05) shift of tryptophan fluorescence emission peak was detected at pH 5.5 in the presence of sphingomyelin, whereas at pH 7.4 a similar but minor shift was observed. This effect may relate to the exposure of VP1 N-terminus in acidic pH as well as to interactions between sphingomyelin and CPV. When the phenomenon was further characterized using circular dichroism spectroscopy, differences in CPV capsid CD spectra with and without sphingomyelin and phosphatidyl serine were detected, corresponding to data obtained with tryptophan fluorescence. However, when the enzymatic activity of CPV PLA(2) was tested in the presence of sphingomyelin, no significant effect in the function of the enzyme was detected. Thus, the structural changes observed with spectroscopic techniques appear not to manipulate the activity of CPV PLA(2), and may therefore implicate alternative interactions between CPV capsid and sphingomyelin.


Assuntos
Capsídeo/química , Parvovirus Canino/química , Esfingomielinas/metabolismo , Animais , Capsídeo/metabolismo , Proteínas do Capsídeo/química , Cães , Parvovirus Canino/metabolismo , Fosfatidilserinas/metabolismo , Fosfolipases A2/metabolismo
13.
Wei Sheng Wu Xue Bao ; 48(3): 369-74, 2008 Mar.
Artigo em Chinês | MEDLINE | ID: mdl-18479065

RESUMO

OBJECTIVE: Investigation into the adjuvant effect of the extracellular domain of canine cytotoxic T lymphocyte-associated antigen 4 (CTLA-4). METHODS: We first amplified the cDNA for the extracellular domain from blood lymphocytes using RT-PCR and then amplified the VP2S gene fragment for major antigenic epitopes of the VP2 protein of canine parvovirus (CPV) using PCR. After sequence analysis, we inserted the VP2S fragment into expression vector pQE-31 with or without the coding sequence for the extracellular domain of canine CTLA-4. After transformation of the two recombinant vectors into E. col, we studied recombinant protein expression by isopropyl beta-D-1-thiogalactopyranoside (IPTG) induction. Finally, we immunized BALB/c mice with the same dose of the purified protein VP2S or CTLA-4-VP2S and compared their antibody responses by enzyme-linked immunosorbant assay (ELISA) and haemagglutination inhibition (HI) assay. RESULTS: After 30 cycles of amplification, agarose gel electrophoresis revealed expected PCR products for both gene fragments. Sequence analysis showed that the amplified extracellular domain was 99.2% identical to previously published sequence without mutation in the hexapeptide motif (MYPPPY) for B7 molecule binding. After IPTG induction, the vector-transformed E. coli expressed expected 29-kDa VP2S protein and 42-kDa CTLA-4-VP2S protein. Western blotting showed that both VP2S and CTLA-4-VP2S proteins were recognized by CPV-specific antiserum. After two times of immunizations, the VP2S-specific antibody appeared from week 2 and reached the highest level at week 4 in CTLA-4-VP2S-immunized mice. In VP2S-immunized mice, however, the specific antibody appeared from week 4 and reached the highest level at week 5. The CTLA-4-VP2S-immunized mice had a 100-fold higher ELISA antibody and 10-fold higher HI antibody compared to VP2S-immunized mice. CONCLUSION: The extracellular domain of canine CTLA-4 had strong immunoadjuvant effect on its fused protein.


Assuntos
Adjuvantes Imunológicos/química , Antígenos CD/química , Antígenos CD/imunologia , Proteínas do Capsídeo/imunologia , Espaço Extracelular/metabolismo , Parvovirus Canino/química , Parvovirus Canino/imunologia , Adjuvantes Imunológicos/genética , Motivos de Aminoácidos , Sequência de Aminoácidos , Animais , Anticorpos/análise , Anticorpos/imunologia , Formação de Anticorpos , Antígenos CD/genética , Western Blotting , Antígeno CTLA-4 , Proteínas do Capsídeo/biossíntese , Proteínas do Capsídeo/isolamento & purificação , DNA Recombinante/genética , Cães , Escherichia coli/genética , Vetores Genéticos/genética , Vetores Genéticos/metabolismo , Imunização , Camundongos , Estrutura Terciária de Proteína , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Análise de Sequência de DNA
14.
Structure ; 3(2): 151-62, 1995 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-7735832

RESUMO

BACKGROUND: Parvoviruses are small icosahedral single-stranded (ss) DNA viruses which replicate in rapidly proliferating cells, causing a variety of serious and often lethal diseases in mammals, including humans. The structure of canine parvovirus (CPV) showed an 11-nucleotide oligomeric fragment of its genome bound to 60 equivalent binding sites on the inside surface of the capsid. This provides an opportunity to study the conformation of ssDNA, its interactions with protein, and its role in viral assembly. RESULTS: The icosahedrally ordered part of CPV ssDNA has an unusual loop conformation with the bases pointing outwards and the phosphates surrounding metal ions on the inside. The protein interacts with the bases, making 15 putative hydrogen bonds. The DNA electron density indicates preferences for particular base types in parts of the binding site. Statistical analysis of the genome yields approximately 30 regions with sequences similar to that observed in the structure, demonstrating a low level of sequence specificity for binding to capsid protein. CONCLUSIONS: ssDNA can adopt unusual conformations upon association with protein by using phosphoribose backbone rotamers that are found in tRNA, but not in DNA duplexes. The CPV DNA-protein interactions differ from the non-specific backbone interactions seen in some plant and insect viruses. The sequence specificity, albeit low level, of the protein for CPV DNA may contribute both to distinguishing the viral DNA from other nucleic acids and to the DNA packaging process during viral assembly.


Assuntos
Capsídeo/metabolismo , DNA de Cadeia Simples/metabolismo , DNA Viral/metabolismo , Conformação de Ácido Nucleico , Parvovirus Canino/química , Aminoácidos/metabolismo , Animais , Sequência de Bases , DNA de Cadeia Simples/química , DNA Viral/química , Desoxirribonucleotídeos/metabolismo , Cães , Dados de Sequência Molecular , Parvovirus Canino/crescimento & desenvolvimento , Conformação Proteica
15.
Acta Microbiol Immunol Hung ; 63(4): 411-426, 2016 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-27936872

RESUMO

The canine parvovirus (CPV) infection is a highly contagious and serious enteric disease of dogs with high fatality rate. The present study was taken up to characterize the full-length viral polypeptide 2 (VP2) gene of CPV of Indian origin along with the commercially available vaccines. The faecal samples from parvovirus suspected dogs were collected from various states of India for screening by PCR assay and 66.29% of samples were found positive. Six CPV-2a, three CPV-2b, and one CPV-2c types were identified by sequence analysis. Several unique and existing mutations have been noticed in CPV types analyzed indicating emergence of newer variants of CPV in India. The phylogenetic analysis revealed that all the field CPV types were grouped in different subclades within two main clades, but away from the commercial vaccine strains. CPV-2b and CPV-2c types with unique mutations were found to be establishing in India apart from the prevailing CPV-2a type. Mutations and the positive selection of the mutants were found to be the major mechanism of emergence and evolution of parvovirus. Therefore, the incorporation of local strain in the vaccine formulation may be considered for effective control of CPV infections in India.


Assuntos
Proteínas do Capsídeo/genética , Doenças do Cão/virologia , Infecções por Parvoviridae/veterinária , Parvovirus Canino/isolamento & purificação , Animais , Cães , Fezes/virologia , Índia , Mutação , Infecções por Parvoviridae/virologia , Parvovirus Canino/química , Parvovirus Canino/classificação , Parvovirus Canino/genética , Filogenia , Análise de Sequência de DNA
16.
J Mol Biol ; 264(3): 497-520, 1996 Dec 06.
Artigo em Inglês | MEDLINE | ID: mdl-8969301

RESUMO

The DNA-containing capsid of canine parvovirus (CPV) is analyzed following atomic refinement at 2.9 A resolution. The capsid contains 60 copies of the capsid protein related by icosahedral symmetry. The atomic model has been extended from the first residue (Gly37) of the unrefined 3.25 A structure towards the N terminus. The electron density shows that approximately 87% of the capsid proteins have N termini on the inside of the capsid, but for approximately 13%, the polypeptide starts on the outside and runs through one of the pores surrounding each 5-fold axis, explaining apparently conflicting antigenic data. Analysis of potential hydrogen bonds reveals approximately 50% more secondary structure than previously apparent. Most of the additional secondary structure are in the 71 and 221 residue-long loop insertions between beta-strands E and F and G and H, forming subunit-bridging sheets that likely add specificity to assembly interactions. Structural analysis of the extensive subunit interactions around the 3-fold axes shows that assembly is a multistep process with loops intertwining following initial contact. Estimated free energies of association suggest that the formation of 3 and 5-fold contacts likely takes precedence over 2-fold interactions. Energies for initial association into trimers or pentamers would be similar, but the intertwining of loops about the 3-fold axis adds an additional large activation barrier to dissociation. Analysis of the surfaces of the assembled capsid shows a surprising lack of basic amino acids that might have been expected to interact with the negatively charged phosphoribose backbone of the DNA. Instead, uncharged polar and van der Waal's interactions predominate in the packaging of single-stranded DNA into the capsid.


Assuntos
Capsídeo/química , Parvovirus Canino/química , Estrutura Secundária de Proteína , Sequência de Aminoácidos , Animais , Cães , Ligação de Hidrogênio , Modelos Moleculares , Dados de Sequência Molecular , Conformação Proteica , Homologia de Sequência de Aminoácidos
17.
J Mol Biol ; 300(3): 597-610, 2000 Jul 14.
Artigo em Inglês | MEDLINE | ID: mdl-10884355

RESUMO

Canine parvovirus (CPV) emerged in 1978 as a host range variant of feline panleukopenia virus (FPV). This change of host was mediated by the mutation of five residues on the surface of the capsid. CPV and FPV enter cells by endocytosis and can be taken up by many non-permissive cell lines, showing that their host range and tissue specificity are largely determined by events occurring after cell entry. We have determined the structures of a variety of strains of CPV and FPV at various pH values and in the presence or absence of Ca(2+). The largest structural difference was found to occur in a flexible surface loop, consisting of residues 359 to 375 of the capsid protein. This loop binds a divalent calcium ion in FPV and is adjacent to a double Ca(2+)-binding site, both in CPV and FPV. Residues within the loop and those associated with the double Ca(2+)-binding site were found to be essential for virus infectivity. The residues involved in the double Ca(2+)-binding site are conserved only in FPV and CPV. Our results show that the loop conformation and the associated Ca(2+)-binding are influenced by the Ca(2+) concentration, as well as pH. These changes are correlated with the ability of the virus to hemagglutinate erythrocytes. The co-localization of hemagglutinating activity and host range determinants on the virus surface implies that these properties may be functionally linked. We speculate that the flexible loop and surrounding regions are involved in binding an as yet unidentified host molecule and that this interaction influences host range.


Assuntos
Cálcio/metabolismo , Capsídeo/química , Capsídeo/metabolismo , Vírus da Panleucopenia Felina/química , Parvovirus Canino/química , Substituição de Aminoácidos/genética , Animais , Sítios de Ligação , Capsídeo/genética , Gatos , Cristalização , Cristalografia por Raios X , Ácido Edético/metabolismo , Ácido Edético/farmacologia , Eritrócitos/metabolismo , Eritrócitos/virologia , Vírus da Panleucopenia Felina/genética , Hemaglutininas Virais/metabolismo , Cavalos , Ligação de Hidrogênio , Concentração de Íons de Hidrogênio , Macaca mulatta , Modelos Moleculares , Dados de Sequência Molecular , Mutação/genética , Parvovirus Canino/genética , Maleabilidade , Ligação Proteica , Conformação Proteica/efeitos dos fármacos , Relação Estrutura-Atividade , Temperatura
18.
Vet Microbiol ; 75(2): 127-33, 2000 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-10889403

RESUMO

Canine parvovirus (CPV) was first isolated in 1978 in the USA. Analysis of CPV isolates by monoclonal antibodies and restriction enzymes have shown that after the first emergence of CPV (CPV-2) it evolved to give rise to new antigenic types, which were designated CPV type 2a and type 2b. These new types have replaced the original CPV type 2, although the proportions of each of the new antigenic types vary in different countries. In Brazil, CPV-like infections were first observed in 1979, however, there has been no information concerning the antigenic types of CPV prevailing in South America. In this study, we designed a PCR assay to type canine parvovirus strains in fecal samples collected from symptomatic dogs during 1980 through 1986 and 1990 through 1995. Our data showed that the CPV epizootic in Brazil followed the same pattern observed in the USA of emergence of CPV-2 followed by replacement by the variants CPV-2a and 2b. The predominant strain found during 1980 was CPV-2a, which was substantially replaced by CPV-2b from 1990 to 1995.


Assuntos
Doenças do Cão/virologia , Infecções por Parvoviridae/veterinária , Parvovirus Canino/classificação , Animais , Variação Antigênica/genética , Sequência de Bases , Brasil , Primers do DNA/química , DNA Viral/química , DNA Viral/isolamento & purificação , Cães , Eletroforese em Gel de Ágar/veterinária , Fezes/virologia , Testes de Hemaglutinação/veterinária , Dados de Sequência Molecular , Infecções por Parvoviridae/virologia , Parvovirus Canino/química , Parvovirus Canino/genética , Reação em Cadeia da Polimerase/veterinária , Sensibilidade e Especificidade , Alinhamento de Sequência , Análise de Sequência de DNA , Homologia de Sequência do Ácido Nucleico
19.
J Am Vet Med Assoc ; 217(10): 1500-4, 2000 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-11128540

RESUMO

OBJECTIVE: To determine whether dogs with naturally occurring canine parvoviral (CPV) enteritis have laboratory evidence of hypercoagulability. DESIGN: Case-control study. Animals-9 dogs with naturally occurring CPV enteritis and 9 age-matched control dogs. PROCEDURE: Blood was collected from all dogs within 24 hours of admission for thromboelastography (TEG) and determination of activated partial thromboplastin time (aP-TT), prothrombin time (PT), antithrombin III (AT) activity, and fibrinogen concentration. Fibrin-fibrinogen degradation product (FDP) concentration, D-dimer concentration, and platelet count were obtained in dogs with CPV enteritis only. Records were reviewed for evidence of thrombosis or phlebitis. RESULTS: All 9 dogs with CPV enteritis had evidence of hypercoagulability, determined on the basis of significantly increased TEG maximum amplitude and decreased AT activity. Fibrinogen concentration was significantly higher in dogs with CPV enteritis than in control dogs. The aPTT was moderately prolonged in dogs with CPV enteritis, and FDP concentration was < 5 mg/ml in 7 of 9 dogs. No dogs had a measurable D-dimer concentration. Platelet counts were within reference range. Four of 9 dogs had clinical evidence of venous thrombosis or phlebitis associated with catheters. One dog had multifocal splenic thrombosis identified at necropsy. CONCLUSIONS AND CLINICAL RELEVANCE: Dogs with CPV enteritis have a high prevalence of clinical thrombosis or phlebitis and laboratory evidence of hypercoagulability without disseminated intravascular coagulopathy. Thromboelastography may help identify hypercoagulable states in dogs.


Assuntos
Doenças do Cão/virologia , Enterite/veterinária , Infecções por Parvoviridae/veterinária , Parvovirus Canino/patogenicidade , Trombofilia/veterinária , Animais , Antifibrinolíticos/análise , Antitrombina III/análise , Estudos de Casos e Controles , Doenças do Cão/patologia , Cães , Enterite/patologia , Ensaio de Imunoadsorção Enzimática/veterinária , Produtos de Degradação da Fibrina e do Fibrinogênio/análise , Fibrinogênio/análise , Tempo de Tromboplastina Parcial/veterinária , Infecções por Parvoviridae/sangue , Infecções por Parvoviridae/patologia , Parvovirus Canino/química , Contagem de Plaquetas/veterinária , Tempo de Protrombina/veterinária , Tromboelastografia/veterinária , Trombofilia/patologia
20.
Bing Du Xue Bao ; 25(6): 452-9, 2009 Nov.
Artigo em Chinês | MEDLINE | ID: mdl-20077936

RESUMO

To recognize the molecular biology character, phylogenetic relationship and the state quo prevalent of Canine parvovirus (CPV), Faecal samnples from pet dogs with acute enteritis in the cities of Beijing, Wuhan, and Nanjing were collected and tested for CPV by PCR and other assay between 2006 and 2008. There was no CPV to FPV (MEV) variation by PCR-RFLP analysis in all samples. The complete ORFs of VP2 genes were obtained by PCR from 15 clinical CPVs and 2 CPV vaccine strains. All amplicons were cloned and sequenced. Analysis of the VP2 sequences showed that clinical CPVs both belong to CPV-2a subtype, and could be classified into a new cluster by amino acids contrasting which contains Tyr-->Ile (324) mutation. Besides the 2 CPV vaccine strains belong to CPV-2 subtype, and both of them have scattered variation in amino acids residues of VP2 protein. Construction of the phylogenetic tree based on CPV VP2 sequence showed these 15 CPV clinical strains were in close relationship with Korea strain K001 than CPV-2a isolates in other countries at early time, It is indicated that the canine parvovirus genetic variation was associated with location and time in some degree. The survey of CPV capsid protein VP2 gene provided the useful information for the identification of CPV types and understanding of their genetic relationship.


Assuntos
Doenças do Cão/virologia , Variação Genética , Infecções por Parvoviridae/veterinária , Parvovirus Canino/genética , Proteínas Virais/genética , Sequência de Aminoácidos , Animais , China , Cães , Dados de Sequência Molecular , Infecções por Parvoviridae/virologia , Parvovirus Canino/química , Parvovirus Canino/classificação , Parvovirus Canino/isolamento & purificação , Filogenia , Alinhamento de Sequência , Proteínas Virais/química
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