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Cetaceans evolution: insights from the genome sequences of common minke whales.
Park, Jung Youn; An, Yong-Rock; Kanda, Naohisa; An, Chul-Min; An, Hye Suck; Kang, Jung-Ha; Kim, Eun Mi; An, Du-Hae; Jung, Hojin; Joung, Myunghee; Park, Myung Hum; Yoon, Sook Hee; Lee, Bo-Young; Lee, Taeheon; Kim, Kyu-Won; Park, Won Cheoul; Shin, Dong Hyun; Lee, Young Sub; Kim, Jaemin; Kwak, Woori; Kim, Hyeon Jeong; Kwon, Young-Jun; Moon, Sunjin; Kim, Yuseob; Burt, David W; Cho, Seoae; Kim, Heebal.
  • Park JY; Biotechnology Research Division, National Fisheries Research & Development Institute, Gijang gun, Busan, 619-705, Republic of Korea. genome@korea.kr.
  • An YR; Cetacean Research Institute, National Fisheries Research & Development Institute, Nam-gu, Ulsan, 680-050, Republic of Korea. rock@korea.kr.
  • Kanda N; The Institute of Cetacean Research, Toyomi 4-5, Chuo-ku, Tokyo, 104-0055, Japan. kanda@cetacean.jp.
  • An CM; Biotechnology Research Division, National Fisheries Research & Development Institute, Gijang gun, Busan, 619-705, Republic of Korea. ancm@korea.kr.
  • An HS; Biotechnology Research Division, National Fisheries Research & Development Institute, Gijang gun, Busan, 619-705, Republic of Korea. hsan97@korea.kr.
  • Kang JH; Biotechnology Research Division, National Fisheries Research & Development Institute, Gijang gun, Busan, 619-705, Republic of Korea. genetics@korea.kr.
  • Kim EM; Biotechnology Research Division, National Fisheries Research & Development Institute, Gijang gun, Busan, 619-705, Republic of Korea. ocean0629@nfrdi.re.kr.
  • An DH; Cetacean Research Institute, National Fisheries Research & Development Institute, Nam-gu, Ulsan, 680-050, Republic of Korea. dhan119@korea.kr.
  • Jung H; Codes division, Insilicogen,Inc., Suwon, Gyeonggi-do, 441-813, Republic of Korea. hjjung@insilicogen.com.
  • Joung M; Codes division, Insilicogen,Inc., Suwon, Gyeonggi-do, 441-813, Republic of Korea. mhjung@insilicogen.com.
  • Park MH; TNT Research, #924 Doosan Venture Digm, Anyang, Gyeonggi-do, 431-755, Republic of Korea. pmh@tntresearch.co.kr.
  • Yoon SH; Department of Agricultural Biotechnology, Seoul National University, Seoul, 151-921, Republic of Korea. yoonsh312@snu.ac.kr.
  • Lee BY; Department of Agricultural Biotechnology, Seoul National University, Seoul, 151-921, Republic of Korea. bylee613@snu.ac.kr.
  • Lee T; Department of Agricultural Biotechnology, Seoul National University, Seoul, 151-921, Republic of Korea. taeheon@snu.ac.kr.
  • Kim KW; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, 151-742, Republic of Korea. shkyuwon@gmail.com.
  • Park WC; Department of Agricultural Biotechnology, Seoul National University, Seoul, 151-921, Republic of Korea. bbadack@snu.ac.kr.
  • Shin DH; Department of Agricultural Biotechnology, Seoul National University, Seoul, 151-921, Republic of Korea. sdh1214@snu.ac.kr.
  • Lee YS; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, 151-742, Republic of Korea. lcslys2@snu.ac.kr.
  • Kim J; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, 151-742, Republic of Korea. jmkim85@snu.ac.kr.
  • Kwak W; C&K Genomics, Seoul National University Research Park, Seoul, 151-919, Republic of Korea. jmkim85@snu.ac.kr.
  • Kim HJ; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, 151-742, Republic of Korea. asleo02@snu.ac.kr.
  • Kwon YJ; C&K Genomics, Seoul National University Research Park, Seoul, 151-919, Republic of Korea. asleo02@snu.ac.kr.
  • Moon S; C&K Genomics, Seoul National University Research Park, Seoul, 151-919, Republic of Korea. kimhj@cnkgenomics.com.
  • Kim Y; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul, 151-742, Republic of Korea. youngjun0827@snu.ac.kr.
  • Burt DW; Department of Genome Sciences, University of Washington, Seattle, WA, 98195-5065, USA. sunjin@uw.edu.
  • Cho S; Department of Life Science, Ewha Womans University, Seoul, Korea. yuseob@ewha.ac.kr.
  • Kim H; The Roslin Institute, University of Edinburgh, Midlothian, EH25 9GR, UK. dave.burt@roslin.ed.ac.uk.
BMC Genomics ; 16: 13, 2015 Jan 22.
Article en En | MEDLINE | ID: mdl-25609461
ABSTRACT

BACKGROUND:

Whales have captivated the human imagination for millennia. These incredible cetaceans are the only mammals that have adapted to life in the open oceans and have been a source of human food, fuel and tools around the globe. The transition from land to water has led to various aquatic specializations related to hairless skin and ability to regulate their body temperature in cold water.

RESULTS:

We present four common minke whale (Balaenoptera acutorostrata) genomes with depth of ×13 ~ ×17 coverage and perform resequencing technology without a reference sequence. Our results indicated the time to the most recent common ancestors of common minke whales to be about 2.3574 (95% HPD, 1.1521 - 3.9212) million years ago. Further, we found that genes associated with epilation and tooth-development showed signatures of positive selection, supporting the morphological uniqueness of whales.

CONCLUSIONS:

This whole-genome sequencing offers a chance to better understand the evolutionary journey of one of the largest mammals on earth.
Asunto(s)

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Genoma / Ballena Minke / Evolución Biológica Límite: Animals Idioma: En Año: 2015 Tipo del documento: Article

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Genoma / Ballena Minke / Evolución Biológica Límite: Animals Idioma: En Año: 2015 Tipo del documento: Article