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Challenging AQP4 druggability for NMO-IgG antibody binding using molecular dynamics and molecular interaction fields.
Mangiatordi, Giuseppe Felice; Alberga, Domenico; Siragusa, Lydia; Goracci, Laura; Lattanzi, Gianluca; Nicolotti, Orazio.
  • Mangiatordi GF; Dipartimento di Farmacia - Scienze del Farmaco, Via Orabona, 4, Università di Bari "Aldo Moro", Bari, Italy.
  • Alberga D; Dipartimento Interateneo di Fisica "M. Merlin", Università di Bari "Aldo Moro" and INFN, Via E. Orabona, 4, I-70126 Bari, Italy; Centro Ricerche TIRES, University of Bari "Aldo Moro", Via Amendola 173, I-70126 Bari, Italy.
  • Siragusa L; Molecular Discovery Limited, 215 Marsh Road, Pinner, Middlesex, London HA5 5NE, UK.
  • Goracci L; Department of Chemistry, Biology and Biotechnology, University of Perugia, 06123 Perugia, Italy.
  • Lattanzi G; Dipartimento Interateneo di Fisica "M. Merlin", Università di Bari "Aldo Moro" and INFN, Via E. Orabona, 4, I-70126 Bari, Italy; Centro Ricerche TIRES, University of Bari "Aldo Moro", Via Amendola 173, I-70126 Bari, Italy.
  • Nicolotti O; Dipartimento di Farmacia - Scienze del Farmaco, Via Orabona, 4, Università di Bari "Aldo Moro", Bari, Italy; Centro Ricerche TIRES, University of Bari "Aldo Moro", Via Amendola 173, I-70126 Bari, Italy. Electronic address: orazio.nicolotti@uniba.it.
Biochim Biophys Acta ; 1848(7): 1462-71, 2015 Jul.
Article en En | MEDLINE | ID: mdl-25839357
ABSTRACT
Neuromyelitis optica (NMO) is a multiple sclerosis-like immunopathology disease affecting optic nerves and the spinal cord. Its pathological hallmark is the deposition of a typical immunoglobulin, called NMO-IgG, against the water channel Aquaporin-4 (AQP4). Preventing NMO-IgG binding would represent a valuable molecular strategy for a focused NMO therapy. The recent observation that aspartate in position 69 (D69) is determinant for the formation of NMO-IgG epitopes prompted us to carry out intensive Molecular Dynamics (MD) studies on a number of single-point AQP4 mutants. Here, we report a domino effect originating from the point mutation at position 69 we find that the side chain of T62 is reoriented far from its expected position leaning on the lumen of the pore. More importantly, the strength of the H-bond interaction between L53 and T56, at the basis of the loop A, is substantially weakened. These events represent important pieces of a clear-cut mechanistic rationale behind the failure of the NMO-IgG binding, while the water channel function as well as the propensity to aggregate into OAPs remains unaltered. The molecular interaction fields (MIF)-based analysis of cavities complemented MD findings indicating a putative binding site comprising the same residues determining epitope reorganization. In this respect, docking studies unveiled an intriguing perspective to address the future design of small drug-like compounds against NMO. In agreement with recent experimental observations, the present study is the first computational attempt to elucidate NMO-IgG binding at the molecular level, as well as a first effort toward a less elusive AQP4 druggability.
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Inmunoglobulina G / Ácido Aspártico / Acuaporina 4 / Simulación de Dinámica Molecular Límite: Humans Idioma: En Año: 2015 Tipo del documento: Article

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Inmunoglobulina G / Ácido Aspártico / Acuaporina 4 / Simulación de Dinámica Molecular Límite: Humans Idioma: En Año: 2015 Tipo del documento: Article