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Multi-ancestry genome-wide association analyses improve resolution of genes and pathways influencing lung function and chronic obstructive pulmonary disease risk.
Shrine, Nick; Izquierdo, Abril G; Chen, Jing; Packer, Richard; Hall, Robert J; Guyatt, Anna L; Batini, Chiara; Thompson, Rebecca J; Pavuluri, Chandan; Malik, Vidhi; Hobbs, Brian D; Moll, Matthew; Kim, Wonji; Tal-Singer, Ruth; Bakke, Per; Fawcett, Katherine A; John, Catherine; Coley, Kayesha; Piga, Noemi Nicole; Pozarickij, Alfred; Lin, Kuang; Millwood, Iona Y; Chen, Zhengming; Li, Liming; Wijnant, Sara R A; Lahousse, Lies; Brusselle, Guy; Uitterlinden, Andre G; Manichaikul, Ani; Oelsner, Elizabeth C; Rich, Stephen S; Barr, R Graham; Kerr, Shona M; Vitart, Veronique; Brown, Michael R; Wielscher, Matthias; Imboden, Medea; Jeong, Ayoung; Bartz, Traci M; Gharib, Sina A; Flexeder, Claudia; Karrasch, Stefan; Gieger, Christian; Peters, Annette; Stubbe, Beate; Hu, Xiaowei; Ortega, Victor E; Meyers, Deborah A; Bleecker, Eugene R; Gabriel, Stacey B.
  • Shrine N; Department of Population Health Sciences, University of Leicester, Leicester, UK. nick.shrine@leicester.ac.uk.
  • Izquierdo AG; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Chen J; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Packer R; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Hall RJ; Division of Respiratory Medicine and NIHR Nottingham Biomedical Research Centre, University of Nottingham, Nottingham, UK.
  • Guyatt AL; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Batini C; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Thompson RJ; Leicester National Institute for Health and Care Research, Biomedical Research Centre, Glenfield Hospital, Leicester, UK.
  • Pavuluri C; Division of Respiratory Medicine and NIHR Nottingham Biomedical Research Centre, University of Nottingham, Nottingham, UK.
  • Malik V; Channing Division of Network Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
  • Hobbs BD; Channing Division of Network Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
  • Moll M; Channing Division of Network Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
  • Kim W; Harvard Medical School, Boston, MA, USA.
  • Tal-Singer R; Channing Division of Network Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
  • Bakke P; Channing Division of Network Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Brigham and Women's Hospital, Boston, MA, USA.
  • Fawcett KA; COPD Foundation, Washington DC, USA.
  • John C; Department of Clinical Science, Unversity of Bergen, Bergen, Norway.
  • Coley K; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Piga NN; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Pozarickij A; Leicester National Institute for Health and Care Research, Biomedical Research Centre, Glenfield Hospital, Leicester, UK.
  • Lin K; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Millwood IY; Department of Population Health Sciences, University of Leicester, Leicester, UK.
  • Chen Z; Nuffield Department of Population Health, University of Oxford, Oxford, UK.
  • Li L; Nuffield Department of Population Health, University of Oxford, Oxford, UK.
  • Wijnant SRA; MRC Population Health Research Unit, University of Oxford, Oxford, UK.
  • Lahousse L; Nuffield Department of Population Health, University of Oxford, Oxford, UK.
  • Brusselle G; MRC Population Health Research Unit, University of Oxford, Oxford, UK.
  • Uitterlinden AG; Department of Epidemiology and Biostatistics, School of Public Health, Peking University Health Science Center, Beijing, China.
  • Oelsner EC; Department of Respiratory Diseases, Ghent Universital Hospital, Ghent, Belgium.
  • Rich SS; Department of Bioanalysis, Faculty of Pharmaceutical Sciences, Ghent University, Ghent, Belgium.
  • Barr RG; Department of Epidemiology, Eramus Medical Center, Rotterdam, The Netherlands.
  • Kerr SM; Department of Bioanalysis, Faculty of Pharmaceutical Sciences, Ghent University, Ghent, Belgium.
  • Vitart V; Department of Epidemiology, Eramus Medical Center, Rotterdam, The Netherlands.
  • Brown MR; Department of Respiratory Diseases, Ghent Universital Hospital, Ghent, Belgium.
  • Wielscher M; Department of Epidemiology, Eramus Medical Center, Rotterdam, The Netherlands.
  • Imboden M; Department of Internal Medicine, Eramus Medical Center, Rotterdam, The Netherlands.
  • Jeong A; Center for Public Health Genomics, University of Virginia, Charlottesville, VA, USA.
  • Bartz TM; Department of Medicine, Columbia University Medical Center, New York, NY, USA.
  • Gharib SA; Center for Public Health Genomics, University of Virginia, Charlottesville, VA, USA.
  • Flexeder C; Department of Medicine, Columbia University Medical Center, New York, NY, USA.
  • Karrasch S; Medical Research Council Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, UK.
  • Gieger C; Medical Research Council Human Genetics Unit, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, UK.
  • Peters A; Human Genetics Center, Department of Epidemiology, Human Genetics, and Environmental Sciences, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX, USA.
  • Stubbe B; MRC Centre for Environment and Health, Department of Epidemiology and Biostatistics, School of Public Health, Imperial College London, London, UK.
  • Hu X; Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Allschwil, Switzerland.
  • Ortega VE; Department of Public Health, University of Basel, Basel, Switzerland.
  • Meyers DA; Department of Epidemiology and Public Health, Swiss Tropical and Public Health Institute, Allschwil, Switzerland.
  • Bleecker ER; Department of Public Health, University of Basel, Basel, Switzerland.
  • Gabriel SB; Cardiovascular Health Research Unit, Departments of Medicine and Biostatistics, University of Washington, Seattle, WA, USA.
Nat Genet ; 55(3): 410-422, 2023 03.
Article en En | MEDLINE | ID: mdl-36914875
Lung-function impairment underlies chronic obstructive pulmonary disease (COPD) and predicts mortality. In the largest multi-ancestry genome-wide association meta-analysis of lung function to date, comprising 580,869 participants, we identified 1,020 independent association signals implicating 559 genes supported by ≥2 criteria from a systematic variant-to-gene mapping framework. These genes were enriched in 29 pathways. Individual variants showed heterogeneity across ancestries, age and smoking groups, and collectively as a genetic risk score showed strong association with COPD across ancestry groups. We undertook phenome-wide association studies for selected associated variants as well as trait and pathway-specific genetic risk scores to infer possible consequences of intervening in pathways underlying lung function. We highlight new putative causal variants, genes, proteins and pathways, including those targeted by existing drugs. These findings bring us closer to understanding the mechanisms underlying lung function and COPD, and should inform functional genomics experiments and potentially future COPD therapies.
Asunto(s)

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Enfermedad Pulmonar Obstructiva Crónica / Pulmón Tipo de estudio: Etiology_studies / Prognostic_studies / Risk_factors_studies / Systematic_reviews Límite: Humans Idioma: En Año: 2023 Tipo del documento: Article

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Enfermedad Pulmonar Obstructiva Crónica / Pulmón Tipo de estudio: Etiology_studies / Prognostic_studies / Risk_factors_studies / Systematic_reviews Límite: Humans Idioma: En Año: 2023 Tipo del documento: Article