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Data and Tools Integration in the Canadian Open Neuroscience Platform.
Poline, Jean-Baptiste; Das, Samir; Glatard, Tristan; Madjar, Cécile; Dickie, Erin W; Lecours, Xavier; Beaudry, Thomas; Beck, Natacha; Behan, Brendan; Brown, Shawn T; Bujold, David; Beauvais, Michael; Caron, Bryan; Czech, Candice; Dharsee, Moyez; Dugré, Mathieu; Evans, Ken; Gee, Tom; Ippoliti, Giulia; Kiar, Gregory; Knoppers, Bartha Maria; Kuehn, Tristan; Le, Diana; Lo, Derek; Mazaheri, Mandana; MacFarlane, Dave; Muja, Naser; O'Brien, Emmet A; O'Callaghan, Liam; Paiva, Santiago; Park, Patrick; Quesnel, Darcy; Rabelais, Henri; Rioux, Pierre; Legault, Mélanie; Tremblay-Mercier, Jennifer; Rotenberg, David; Stone, Jessica; Strauss, Ted; Zaytseva, Ksenia; Zhou, Joey; Duchesne, Simon; Khan, Ali R; Hill, Sean; Evans, Alan C.
  • Poline JB; McGill University, Montreal Neurological Institute and Hospital, McConnell Brain Imaging Centre, Neuro Data Science ORIGAMI lab, Montreal, Quebec, Canada. jbpoline@gmail.com.
  • Das S; McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada. jbpoline@gmail.com.
  • Glatard T; McGill University, McConnell Brain Imaging Centre, Montreal, Quebec, Canada. jbpoline@gmail.com.
  • Madjar C; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Dickie EW; Computer Science, Concordia University, Montreal, Quebec, Canada.
  • Lecours X; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Beaudry T; Krembil Centre for Neuroinformatics, Toronto, Ontario, Canada.
  • Beck N; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Behan B; Computer Science, Concordia University, Montreal, Quebec, Canada.
  • Brown ST; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Bujold D; Ontario Brain Institute, Toronto, Ontario, Canada.
  • Beauvais M; Hewlett Packard Entreprise, Pittsburgh, Pennsylvania, US.
  • Caron B; McGill University, Canadian Centre for Computational Genomics, Montreal, Quebec, Canada.
  • Czech C; University of Toronto, Toronto, Ontario, Canada.
  • Dharsee M; McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada.
  • Dugré M; McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada.
  • Evans K; Indoc Research, Toronto, Ontario, Canada.
  • Gee T; Computer Science, Concordia University, Montreal, Quebec, Canada.
  • Ippoliti G; Indoc Research, Toronto, Ontario, Canada.
  • Kiar G; Indoc Research, Toronto, Ontario, Canada.
  • Knoppers BM; McGill University, Montreal Neurological Institute and Hospital, McConnell Brain Imaging Centre, Neuro Data Science ORIGAMI lab, Montreal, Quebec, Canada.
  • Kuehn T; McGill University, Department of Bioengineering, Montreal, Quebec, Canada.
  • Le D; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Lo D; McGill University, Centre of Genomics and Policy, Montreal, Quebec, Canada.
  • Mazaheri M; University of Western Ontario, Robarts Research Institute, Montreal, Quebec, Canada.
  • MacFarlane D; McGill University, Healthy Brains Healthy Lives, Montreal, Quebec, Canada.
  • Muja N; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • O'Brien EA; Computer Science, Concordia University, Montreal, Quebec, Canada.
  • O'Callaghan L; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Paiva S; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Park P; McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada.
  • Quesnel D; McGill University, Healthy Brains Healthy Lives, Neurohub, Montreal, Quebec, Canada.
  • Rabelais H; McGill University, Montreal Neurological Institute and Hospital, McConnell Brain Imaging Centre, Neuro Data Science ORIGAMI lab, Montreal, Quebec, Canada.
  • Rioux P; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Legault M; University of Western Ontario, Robarts Research Institute, Montreal, Quebec, Canada.
  • Tremblay-Mercier J; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Rotenberg D; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Stone J; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Strauss T; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Zaytseva K; Douglas Mental Health University Institute - Research Centre, StoP-Alzheimer Centre, Montreal, Quebec, Canada.
  • Zhou J; Krembil Centre for Neuroinformatics, Toronto, Ontario, Canada.
  • Duchesne S; McGill University, Ludmer Centre for Mental Health, Montreal Neurological Institute, McGill Centre for Integrative Neuroscience, Montreal, Quebec, Canada.
  • Khan AR; McGill University, McConnell Brain Imaging Centre, Montreal, Quebec, Canada.
  • Hill S; McGill University, Canadian Centre for Computational Genomics, Montreal, Quebec, Canada.
  • Evans AC; Computer Science, Concordia University, Montreal, Quebec, Canada.
Sci Data ; 10(1): 189, 2023 04 06.
Article en En | MEDLINE | ID: mdl-37024500
ABSTRACT
We present the Canadian Open Neuroscience Platform (CONP) portal to answer the research community's need for flexible data sharing resources and provide advanced tools for search and processing infrastructure capacity. This portal differs from previous data sharing projects as it integrates datasets originating from a number of already existing platforms or databases through DataLad, a file level data integrity and access layer. The portal is also an entry point for searching and accessing a large number of standardized and containerized software and links to a computing infrastructure. It leverages community standards to help document and facilitate reuse of both datasets and tools, and already shows a growing community adoption giving access to more than 60 neuroscience datasets and over 70 tools. The CONP portal demonstrates the feasibility and offers a model of a distributed data and tool management system across 17 institutions throughout Canada.
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Bases de Datos Factuales País como asunto: America do norte Idioma: En Año: 2023 Tipo del documento: Article
Texto completo
Imprimir
XML
PubMed Links
Search on Google

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Programas Informáticos / Bases de Datos Factuales País como asunto: America do norte Idioma: En Año: 2023 Tipo del documento: Article