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A genome assembly of the Yuma myotis bat, Myotis yumanensis.
Curti, Joseph N; Fraser, Devaughn; Escalona, Merly; Fairbairn, Colin W; Sacco, Samuel; Sahasrabudhe, Ruta; Nguyen, Oanh; Seligmann, William; Sudmant, Peter H; Toffelmier, Erin; Vazquez, Juan Manuel; Wayne, Robert; Shaffer, H Bradley; Buchalski, Michael R.
  • Curti JN; Department of Ecology and Evolutionary Biology, University of California, Los Angeles (UCLA), Los Angeles, CA, United States.
  • Fraser D; Connecticut Department of Energy and Environmental Protection, Hartford, CT, United States.
  • Escalona M; Department of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA, United States.
  • Fairbairn CW; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA, United States.
  • Sacco S; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA, United States.
  • Sahasrabudhe R; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California, Davis, Davis, CA, United States.
  • Nguyen O; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California, Davis, Davis, CA, United States.
  • Seligmann W; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA, United States.
  • Sudmant PH; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States.
  • Toffelmier E; Department of Ecology and Evolutionary Biology, University of California, Los Angeles (UCLA), Los Angeles, CA, United States.
  • Vazquez JM; Department of Integrative Biology, University of California, Berkeley, Berkeley, CA, United States.
  • Wayne R; Department of Ecology and Evolutionary Biology, University of California, Los Angeles (UCLA), Los Angeles, CA, United States.
  • Shaffer HB; Department of Ecology and Evolutionary Biology, University of California, Los Angeles (UCLA), Los Angeles, CA, United States.
  • Buchalski MR; Institute of the Environment and Sustainability, La Kretz Center for California Conservation Science, Institute of the Environment and Sustainability, University of California, Los Angeles (UCLA), Los Angeles, CA, United States.
J Hered ; 115(1): 139-148, 2024 Feb 03.
Article en En | MEDLINE | ID: mdl-37712349
ABSTRACT
The Yuma myotis bat (Myotis yumanensis) is a small vespertilionid bat and one of 52 species of new world Myotis bats in the subgenus Pizonyx. While M. yumanensis populations currently appear relatively stable, it is one of 12 bat species known or suspected to be susceptible to white-nose syndrome, the fungal disease causing declines in bat populations across North America. Only two of these 12 species have genome resources available, which limits the ability of resource managers to use genomic techniques to track the responses of bat populations to white-nose syndrome generally. Here we present the first de novo genome assembly for Yuma myotis, generated as a part of the California Conservation Genomics Project. The M. yumanensis genome was generated using a combination of PacBio HiFi long reads and Omni-C chromatin-proximity sequencing technology. This high-quality genome is one of the most complete bat assemblies available, with a contig N50 of 28.03 Mb, scaffold N50 of 99.14 Mb, and BUSCO completeness score of 93.7%. The Yuma myotis genome provides a high-quality resource that will aid in comparative genomic and evolutionary studies, as well as inform conservation management related to white-nose syndrome.
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Quirópteros Límite: Animals País como asunto: America do norte Idioma: En Año: 2024 Tipo del documento: Article

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Quirópteros Límite: Animals País como asunto: America do norte Idioma: En Año: 2024 Tipo del documento: Article