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High-quality full genome assembly of historic Xylella fastidiosa strains from ICMP collection using a hybrid sequencing approach.
Kant, Pragya; Brohier, Natasha; Mann, Rachel; Rigano, Luciano; Taylor, Robert; Wong-Bajracharya, Johanna; Chapman, Toni A; Kehoe, Monica; Roach, Rebecca; Rodoni, Brendan; Constable, Fiona.
  • Kant P; Department of Energy, Environment and Climate Action, Agriculture Victoria Research , Bundoora, Victoria, Australia.
  • Brohier N; Department of Energy, Environment and Climate Action, Agriculture Victoria Research , Bundoora, Victoria, Australia.
  • Mann R; Department of Energy, Environment and Climate Action, Agriculture Victoria Research , Bundoora, Victoria, Australia.
  • Rigano L; Plant Health and Environment Laboratory, Ministry for Primary Industries , Auckland, New Zealand.
  • Taylor R; Plant Health and Environment Laboratory, Ministry for Primary Industries , Auckland, New Zealand.
  • Wong-Bajracharya J; Department of Primary Industries, Plant Biosecurity Research and Diagnostics , New South Wales, Australia.
  • Chapman TA; Department of Primary Industries, Plant Biosecurity Research and Diagnostics , New South Wales, Australia.
  • Kehoe M; Department of Primary Industries and Regional Development, Biosecurity and Sustainability , Western Australia, Australia.
  • Roach R; Department of Agriculture and Fisheries , Queensland, Australia.
  • Rodoni B; Department of Energy, Environment and Climate Action, Agriculture Victoria Research , Bundoora, Victoria, Australia.
  • Constable F; Department of Energy, Environment and Climate Action, Agriculture Victoria Research , Bundoora, Victoria, Australia.
Microbiol Resour Announc ; 12(11): e0053623, 2023 Nov 16.
Article en En | MEDLINE | ID: mdl-37847022
ABSTRACT
High-quality complete genomes of five Xylella fastidiosa strains were assembled by combining Nanopore and Illumina sequencing data. Among these, International Collection of Micro-organisms from Plants (ICMP) 8731, ICMP 8742 and ICMP 8745 belong to subspecies fastidiosa while ICMP 8739 and ICMP 8740 were determined as subspecies multiplex. The strains were further classified into sequence types.
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Texto completo: 1 Banco de datos: MEDLINE Idioma: En Año: 2023 Tipo del documento: Article
Texto completo
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PubMed Links
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Texto completo: 1 Banco de datos: MEDLINE Idioma: En Año: 2023 Tipo del documento: Article