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Genomic diversity of group A rotaviruses from wild boars and domestic pigs in Japan: wide prevalence of NSP5 carrying the H2 genotype.
Shizawa, Shigeki; Fukuda, Fujiko; Kikkawa, Yasuhiro; Oi, Toru; Takemae, Hitoshi; Masuda, Tsuneyuki; Ishida, Hiroho; Murakami, Hironobu; Sakaguchi, Shoichi; Mizutani, Tetsuya; Nagai, Makoto; Oba, Mami.
  • Shizawa S; School of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
  • Fukuda F; Ishikawa Nanbu Livestock Hygiene Service Center, Kanazawa, Ishikawa, 920-3101, Japan.
  • Kikkawa Y; Global Pig Farm, Inc., Shibukawa, Gunma, 377-0052, Japan.
  • Oi T; Faculty of Bioresources and Environmental Science, Ishikawa Prefectural University, Nonoichi, Ishikawa, 921-8836, Japan.
  • Takemae H; Center for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
  • Masuda T; Faculty of Veterinary Medicine, Okayama University of Science, Imabari, Ehime, 794-0085, Japan.
  • Ishida H; School of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
  • Murakami H; School of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
  • Sakaguchi S; Department of Microbiology and Infection Control, Faculty of Medicine, Osaka Medical and Pharmaceutical University, Osaka, 569-8686, Japan.
  • Mizutani T; Center for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
  • Nagai M; School of Veterinary Medicine, Azabu University, Sagamihara, Kanagawa, 252-5201, Japan.
  • Oba M; Center for infectious Disease Epidemiology and Prevention Research, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, 183-8509, Japan.
Arch Virol ; 169(3): 63, 2024 Mar 07.
Article en En | MEDLINE | ID: mdl-38451342
ABSTRACT
Group A rotavirus (RVA) sequences were detected in 10.8% (23/212) and 20.7% (87/421) of fecal samples collected in 2017-2022 from wild boars and domestic pigs, using next-generation sequencing. Complete genome sequence analysis of one wild boar and 13 domestic pig RVAs revealed that six of them carried the rare H2 NSP5 genotype. Out of the 39 samples for which the NSP5 genotype could be determined, 23 (59.0%) were of genotype H2. H2 porcine RVAs consist exclusively of Japanese porcine RVAs and exhibit sequence diversity in each segment, suggesting that H2 porcine RVAs may have evolved through reassortment within the Japanese pig population.
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Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Rotavirus / Sus scrofa Límite: Animals País como asunto: Asia Idioma: En Año: 2024 Tipo del documento: Article
Texto completo
Imprimir
XML
PubMed Links
Search on Google

Texto completo: 1 Banco de datos: MEDLINE Asunto principal: Rotavirus / Sus scrofa Límite: Animals País como asunto: Asia Idioma: En Año: 2024 Tipo del documento: Article