MageComet--web application for harmonizing existing large-scale experiment descriptions.
Bioinformatics
; 28(10): 1402-3, 2012 May 15.
Article
em En
| MEDLINE
| ID: mdl-22474121
ABSTRACT
MOTIVATION Meta-analysis of large gene expression datasets obtained from public repositories requires consistently annotated data. Curation of such experiments, however, is an expert activity which involves repetitive manipulation of text. Existing tools for automated curation are few, which bottleneck the analysis pipeline. RESULTS:
We present MageComet, a web application for biologists and annotators that facilitates the re-annotation of gene expression experiments in MAGE-TAB format. It incorporates data mining, automatic annotation, use of ontologies and data validation to improve the consistency and quality of experimental meta-data from the ArrayExpress Repository.
Texto completo:
1
Base de dados:
MEDLINE
Assunto principal:
Internet
/
Bases de Dados Genéticas
/
Anotação de Sequência Molecular
Tipo de estudo:
Systematic_reviews
Idioma:
En
Ano de publicação:
2012
Tipo de documento:
Article