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Speeding up sequence specific assignment of IDPs.
Bermel, Wolfgang; Bertini, Ivano; Felli, Isabella C; Gonnelli, Leonardo; Kozminski, Wiktor; Piai, Alessandro; Pierattelli, Roberta; Stanek, Jan.
Afiliação
  • Bermel W; Bruker BioSpin GmbH, Silberstreifen, 76287 Rheinstetten, Germany.
J Biomol NMR ; 53(4): 293-301, 2012 Aug.
Article em En | MEDLINE | ID: mdl-22684679
The characterization of intrinsically disordered proteins (IDPs) by NMR spectroscopy is made difficult by the extensive spectral overlaps. To overcome the intrinsic low-resolution of the spectra the introduction of high-dimensionality experiments is essential. We present here a set of high-resolution experiments based on direct (13)C-detection which proved useful in the assignment of α-synuclein, a paradigmatic IDP. In particular, we describe the implementation of 4D HCBCACON, HCCCON, HCBCANCO, 4/5D HNCACON and HNCANCO and 3/4D HCANCACO experiments, specifically tailored for spin system identification and backbone resonances sequential assignment. The use of non-uniform-sampling in the indirect dimension and of the H-flip approach to achieve longitudinal relaxation enhancement rendered the experiments very practical.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Proteínas / Ressonância Magnética Nuclear Biomolecular Limite: Humans Idioma: En Ano de publicação: 2012 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Proteínas / Ressonância Magnética Nuclear Biomolecular Limite: Humans Idioma: En Ano de publicação: 2012 Tipo de documento: Article