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Genome sequence of Frateuria aurantia type strain (Kondô 67(T)), a xanthomonade isolated from Lilium auratium Lindl.
Anderson, Iain; Teshima, Huzuki; Nolan, Matt; Lapidus, Alla; Tice, Hope; Del Rio, Tijana Glavina; Cheng, Jan-Fang; Han, Cliff; Tapia, Roxanne; Goodwin, Lynne A; Pitluck, Sam; Liolios, Konstantinos; Mavromatis, Konstantinos; Pagani, Ioanna; Ivanova, Natalia; Mikhailova, Natalia; Pati, Amrita; Chen, Amy; Palaniappan, Krishna; Land, Miriam; Rohde, Manfred; Lang, Elke; Detter, John C; Göker, Markus; Woyke, Tanja; Bristow, James; Eisen, Jonathan A; Markowitz, Victor; Hugenholtz, Philip; Kyrpides, Nikos C; Klenk, Hans-Peter.
Afiliação
  • Anderson I; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Teshima H; DOE Joint Genome Institute, Walnut Creek, California, USA ; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Nolan M; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Lapidus A; Theodosius Dobzhansky Center for Genome Bionformatics, St. Petersburg State University, St. Petersburg, Russia ; Algorithmic Biology Lab, St. Petersburg Academic University, St.Petersburg, Russia.
  • Tice H; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Del Rio TG; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Cheng JF; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Han C; DOE Joint Genome Institute, Walnut Creek, California, USA ; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Tapia R; DOE Joint Genome Institute, Walnut Creek, California, USA ; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Goodwin LA; DOE Joint Genome Institute, Walnut Creek, California, USA ; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Pitluck S; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Liolios K; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Mavromatis K; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Pagani I; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Ivanova N; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Mikhailova N; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Pati A; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Chen A; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Palaniappan K; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Land M; Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
  • Rohde M; HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany.
  • Lang E; Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
  • Detter JC; DOE Joint Genome Institute, Walnut Creek, California, USA ; Los Alamos National Laboratory, Bioscience Division, Los Alamos, New Mexico, USA.
  • Göker M; Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
  • Woyke T; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Bristow J; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Eisen JA; DOE Joint Genome Institute, Walnut Creek, California, USA ; University of California Davis Genome Center, Davis, California, USA.
  • Markowitz V; Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
  • Hugenholtz P; DOE Joint Genome Institute, Walnut Creek, California, USA ; Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.
  • Kyrpides NC; DOE Joint Genome Institute, Walnut Creek, California, USA.
  • Klenk HP; Leibniz Institute DSMZ - German Collection of Microorganisms and Cell Cultures, Braunschweig, Germany.
Stand Genomic Sci ; 9(1): 83-92, 2013 Oct 16.
Article em En | MEDLINE | ID: mdl-24501647
ABSTRACT
Frateuria aurantia (ex Kondô and Ameyama 1958) Swings et al. 1980 is a member of the bispecific genus Frateuria in the family Xanthomonadaceae, which is already heavily targeted for non-type strain genome sequencing. Strain Kondô 67(T) was initially (1958) identified as a member of 'Acetobacter aurantius', a name that was not considered for the approved list. Kondô 67(T) was therefore later designated as the type strain of the newly proposed acetogenic species Frateuria aurantia . The strain is of interest because of its triterpenoids (hopane family). F. aurantia Kondô 67(T) is the first member of the genus Frateura whose genome sequence has been deciphered, and here we describe the features of this organism, together with the complete genome sequence and annotation. The 3,603,458-bp long chromosome with its 3,200 protein-coding and 88 RNA genes is a part of the G enomic E ncyclopedia of Bacteria and Archaea project.
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2013 Tipo de documento: Article
Texto completo
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PubMed Links
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Texto completo: 1 Base de dados: MEDLINE Idioma: En Ano de publicação: 2013 Tipo de documento: Article