Cross-validation to select Bayesian hierarchical models in phylogenetics.

Duchêne, Sebastián; Duchêne, David A; Di Giallonardo, Francesca; Eden, John-Sebastian; Geoghegan, Jemma L; Holt, Kathryn E; Ho, Simon Y W; Holmes, Edward C

Duchêne, Sebastián; Duchêne, David A; Di Giallonardo, Francesca; Eden, John-Sebastian; Geoghegan, Jemma L; Holt, Kathryn E; Ho, Simon Y W; Holmes, Edward C.

Afiliação

Duchêne S; Marie Bashir Institute of Infectious Diseases and Biosecurity, Charles Perkins Centre, Sydney Medical School, University of Sydney, Sydney, NSW, 2006, Australia. sebastian.duchene@sydney.edu.au.
Duchêne DA; School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, 2006, Australia. sebastian.duchene@sydney.edu.au.
Di Giallonardo F; School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, 2006, Australia.
Eden JS; Marie Bashir Institute of Infectious Diseases and Biosecurity, Charles Perkins Centre, Sydney Medical School, University of Sydney, Sydney, NSW, 2006, Australia.
Geoghegan JL; School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, 2006, Australia.
Holt KE; Marie Bashir Institute of Infectious Diseases and Biosecurity, Charles Perkins Centre, Sydney Medical School, University of Sydney, Sydney, NSW, 2006, Australia.
Ho SY; School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, 2006, Australia.
Holmes EC; Marie Bashir Institute of Infectious Diseases and Biosecurity, Charles Perkins Centre, Sydney Medical School, University of Sydney, Sydney, NSW, 2006, Australia.

BMC Evol Biol ; 16(1): 115, 2016 05 26.

Article em En | MEDLINE | ID: mdl-27230264

Assuntos

Teorema de Bayes; Modelos Genéticos; Filogenia; Bactérias/genética; Evolução Biológica; Simulação por Computador; Evolução Molecular; Funções Verossimilhança; Reprodutibilidade dos Testes; Vírus/genética

Palavras-chave

Bayesian phylogenetics; Cross-validation; Demographic models; Marginal likelihood; Model selection; Molecular clock

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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Filogenia / Teorema de Bayes / Modelos Genéticos Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2016 Tipo de documento: Article

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