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Imprecise intron losses are less frequent than precise intron losses but are not rare in plants.
Ma, Ming-Yue; Zhu, Tao; Li, Xue-Nan; Lan, Xin-Ran; Liu, Heng-Yuan; Yang, Yu-Fei; Niu, Deng-Ke.
Afiliação
  • Ma MY; MOE Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, 100875, China.
  • Zhu T; MOE Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, 100875, China.
  • Li XN; Beijing Computing Center, Beijing, 10094, China.
  • Lan XR; MOE Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, 100875, China.
  • Liu HY; MOE Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, 100875, China.
  • Yang YF; MOE Key Laboratory for Biodiversity Science and Ecological Engineering, College of Life Sciences, Beijing Normal University, Beijing, 100875, China.
  • Niu DK; Present address: Institute of Genetics & Developmental Biology, Chinese Academy of Sciences, Beijing, 100101, China.
Biol Direct ; 10(1): 24, 2015 05 27.
Article em En | MEDLINE | ID: mdl-27392031
UNLABELLED: In this study, we identified 19 intron losses, including 11 precise intron losses (PILs), six imprecise intron losses (IILs), one de-exonization, and one exon deletion in tomato and potato, and 17 IILs in Arabidopsis thaliana. Comparative analysis of related genomes confirmed that all of the IILs have been fixed during evolution. Consistent with previous studies, our results indicate that PILs are a major type of intron loss. However, at least in plants, IILs are unlikely to be as rare as previously reported. REVIEWERS: This article was reviewed by Jun Yu and Zhang Zhang. For complete reviews, see the Reviewers' Reports section.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Solanum tuberosum / Íntrons / Deleção de Sequência / Arabidopsis / Solanum lycopersicum Idioma: En Ano de publicação: 2015 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Solanum tuberosum / Íntrons / Deleção de Sequência / Arabidopsis / Solanum lycopersicum Idioma: En Ano de publicação: 2015 Tipo de documento: Article