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Network Metamodeling: Effect of Correlation Metric Choice on Phylogenomic and Transcriptomic Network Topology.
Weighill, Deborah A; Jacobson, Daniel.
Afiliação
  • Weighill DA; Faculty of AgriSciences, Institute for Wine Biotechnology, Stellenbosch University, JH Neethling Building, Victoria Street, 7600, Stellenbosch, South Africa.
  • Jacobson D; The Bredesen Center for Interdisciplinary Research and Graduate Education, University of Tennessee, Knoxville, 444 Greve Hall, 821 Volunteer Blvd., Knoxville, TN, 37996-3394, USA.
Adv Biochem Eng Biotechnol ; 160: 143-183, 2017.
Article em En | MEDLINE | ID: mdl-28070594
ABSTRACT
We explore the use of a network meta-modeling approach to compare the effects of similarity metrics used to construct biological networks on the topology of the resulting networks. This work reviews various similarity metrics for the construction of networks and various topology measures for the characterization of resulting network topology, demonstrating the use of these metrics in the construction and comparison of phylogenomic and transcriptomic networks.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Fatores de Transcrição / Transdução de Sinais / Redes e Vias Metabólicas / Transcriptoma / Modelos Biológicos Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2017 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Fatores de Transcrição / Transdução de Sinais / Redes e Vias Metabólicas / Transcriptoma / Modelos Biológicos Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2017 Tipo de documento: Article