Molecular Epidemiology Database for Sequence Management and Data Mining.
Methods Mol Biol
; 1582: 25-31, 2017.
Article
em En
| MEDLINE
| ID: mdl-28357659
ABSTRACT
A central database to aggregate sequence information from a range of epidemiological aspects including HTLV-1 pathogenesis, origin, and evolutionary dynamic would be useful to scientists and physicians worldwide. This Chapter describes two online tools for studies related to HTLV-1, the HTLV-1 Molecular Epidemiology Database and the HTLV-1 Subtyping Tool. The HTLV-1 Molecular Epidemiology Database is a tool for sequence management and data mining which allows researchers to download sequences with clinical and demographic information. The HTLV-1 Subtyping Tool is an online software used for HTLV-1 genotyping, the algorithm consists in the alignment of a query sequence with a carefully selected set of predefined reference strains, followed by phylogenetic analysis.
Palavras-chave
Texto completo:
1
Base de dados:
MEDLINE
Assunto principal:
Software
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Vírus Linfotrópico T Tipo 1 Humano
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Infecções por HTLV-I
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Epidemiologia Molecular
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Bases de Dados de Ácidos Nucleicos
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Mineração de Dados
Tipo de estudo:
Screening_studies
Limite:
Humans
Idioma:
En
Ano de publicação:
2017
Tipo de documento:
Article