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Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.
Chun, Jongsik; Oren, Aharon; Ventosa, Antonio; Christensen, Henrik; Arahal, David Ruiz; da Costa, Milton S; Rooney, Alejandro P; Yi, Hana; Xu, Xue-Wei; De Meyer, Sofie; Trujillo, Martha E.
Afiliação
  • Chun J; Department of Biological Sciences and Institute of Molecular Biology and Genetics, Seoul National University, Seoul 08826, Republic of Korea.
  • Oren A; The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 91904 Jerusalem, Israel.
  • Ventosa A; Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Sevilla, 41012 Sevilla, Spain.
  • Christensen H; Department of Veterinary Disease Biology, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
  • Arahal DR; Departamento de Microbiología y Ecología, and Colección Española de Cultivos Tipo (CECT), Universitat de València, València, Spain.
  • da Costa MS; Center for Neurosciences and Cell Biology, University of Coimbra, 3004-504 Coimbra, Portugal.
  • Rooney AP; U.S. Department of Agriculture, Agricultural Research Service, Crop Bioprotection Research Unit, Peoria, IL 61604, USA.
  • Yi H; Department of Public Health Sciences, Graduate School, Korea University, Seoul, Republic of Korea.
  • Xu XW; Laboratory of Marine Ecosystem and Biogeochemistry, Second Institute of Oceanography, State Oceanic Administration, Hangzhou 310012, PR China.
  • De Meyer S; Centre for Rhizobium Studies, Murdoch University, Murdoch, WA, Australia.
  • Trujillo ME; Departamento de Microbiología y Genética, Campus Miguel de Unamuno, Universidad de Salamanca, 37007, Salamanca, Spain.
Int J Syst Evol Microbiol ; 68(1): 461-466, 2018 Jan.
Article em En | MEDLINE | ID: mdl-29292687
ABSTRACT
Advancement of DNA sequencing technology allows the routine use of genome sequences in the various fields of microbiology. The information held in genome sequences proved to provide objective and reliable means in the taxonomy of prokaryotes. Here, we describe the minimal standards for the quality of genome sequences and how they can be applied for taxonomic purposes.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Filogenia / Células Procarióticas / Análise de Sequência de DNA / Genômica Idioma: En Ano de publicação: 2018 Tipo de documento: Article
Texto completo
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XML
PubMed Links
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Filogenia / Células Procarióticas / Análise de Sequência de DNA / Genômica Idioma: En Ano de publicação: 2018 Tipo de documento: Article