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Ligand-Triggered Structural Changes in the M2 Muscarinic Acetylcholine Receptor.
Jiménez-Rosés, Mireia; Matsoukas, Minos-Timotheos; Caltabiano, Gianluigi; Cordomí, Arnau.
Afiliação
  • Jiménez-Rosés M; Laboratori de Medicina Computacional, Unitat de Bioestadística , Facultat de Medicina, Universitat Autònoma de Barcelona , 08193 Bellaterra , Spain.
  • Matsoukas MT; Department of Pharmacy , University of Patras , 26500 Patras , Greece.
  • Caltabiano G; Laboratori de Medicina Computacional, Unitat de Bioestadística , Facultat de Medicina, Universitat Autònoma de Barcelona , 08193 Bellaterra , Spain.
  • Cordomí A; Laboratori de Medicina Computacional, Unitat de Bioestadística , Facultat de Medicina, Universitat Autònoma de Barcelona , 08193 Bellaterra , Spain.
J Chem Inf Model ; 58(5): 1074-1082, 2018 05 29.
Article em En | MEDLINE | ID: mdl-29671585
ABSTRACT
The muscarinic M2 acetylcholine receptor, one of the few G-protein coupled receptors that has not only been crystallized in both active and inactive conformations but also in the presence of a positive allosteric modulator, is an interesting system to study the molecular mechanisms of GPCR activation and ligand allosterism. Here, we have employed molecular dynamics (MD) simulations (adding to 14 µs in total) to study conformational changes triggered by the inverse agonist R-(-)-3-quinuclidinyl-benzilate (QNB) in the structure of the active M2 receptor (PBD ID 4MQS ) after replacement of the agonist iperoxo by the inverse agonist QNB. This permitted us to identify the sequence of events in the deactivation mechanism of the M2 acetylcholine receptor, which results first in the rearrangement of the transmission switch, the subsequent opening of the extracellular portion of the receptor and finally, the closure of the intracellular part. We also evaluate the effect of the positive allosteric modulator LY2119620 when bound simultaneously with the orthosteric agonist iperoxo and find that it restricts the conformation of Trp4227.35 in a position that modulates the orientation of the Tyr4267.39 at the orthosteric-binding pocket.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Receptor Muscarínico M2 / Simulação de Dinâmica Molecular Idioma: En Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Receptor Muscarínico M2 / Simulação de Dinâmica Molecular Idioma: En Ano de publicação: 2018 Tipo de documento: Article