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Stability of global methylation profiles of whole blood and extracted DNA under different storage durations and conditions.
Li, Yingchuan; Pan, Xiaoqing; Roberts, Michelle L; Liu, Pengyuan; Kotchen, Theodore A; Cowley, Allen W; Mattson, David L; Liu, Yong; Liang, Mingyu; Kidambi, Srividya.
Afiliação
  • Li Y; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Pan X; Department of Critical Care Medicine, Shanghai JiaoTong University affiliated The Sixth People's Hospital, Shanghai, China.
  • Roberts ML; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Liu P; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Kotchen TA; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Cowley AW; Department of Respiratory Medicine, Sir Run Run Shaw Hospital & Institute of Translational Medicine, Zhejiang University, Zhejiang, China.
  • Mattson DL; Department of Medicine, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Liu Y; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Liang M; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
  • Kidambi S; Center of Systems Molecular Medicine, Department of Physiology, Medical College of Wisconsin, Milwaukee, WI, USA.
Epigenomics ; 10(6): 797-811, 2018 06.
Article em En | MEDLINE | ID: mdl-29683333
AIM: To test whether DNA samples stored for a prolonged period (20 years) under various storage conditions could be used for comparative methylation studies using reduced representation bisulfite sequencing. PATIENTS & METHODS: Five groups of human blood DNA samples (n = 5-6/group) were compared. The groupings were based on the anticoagulant used and storage temperature and duration. RESULTS: Methylation profiles of defined genomic regions in the DNA or blood samples archived for 20 years were similar across all storage temperatures, including 4°C. The level of intersample similarity in archived samples was not significantly different than that in recently collected samples. CONCLUSION: Archived samples, including DNA stored at 4°C for 20 years, are suitable for comparative studies of DNA methylation.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Manejo de Espécimes / Metilação de DNA Limite: Humans Idioma: En Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Manejo de Espécimes / Metilação de DNA Limite: Humans Idioma: En Ano de publicação: 2018 Tipo de documento: Article