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Fern genomes elucidate land plant evolution and cyanobacterial symbioses.
Li, Fay-Wei; Brouwer, Paul; Carretero-Paulet, Lorenzo; Cheng, Shifeng; de Vries, Jan; Delaux, Pierre-Marc; Eily, Ariana; Koppers, Nils; Kuo, Li-Yaung; Li, Zheng; Simenc, Mathew; Small, Ian; Wafula, Eric; Angarita, Stephany; Barker, Michael S; Bräutigam, Andrea; dePamphilis, Claude; Gould, Sven; Hosmani, Prashant S; Huang, Yao-Moan; Huettel, Bruno; Kato, Yoichiro; Liu, Xin; Maere, Steven; McDowell, Rose; Mueller, Lukas A; Nierop, Klaas G J; Rensing, Stefan A; Robison, Tanner; Rothfels, Carl J; Sigel, Erin M; Song, Yue; Timilsena, Prakash R; Van de Peer, Yves; Wang, Hongli; Wilhelmsson, Per K I; Wolf, Paul G; Xu, Xun; Der, Joshua P; Schluepmann, Henriette; Wong, Gane K-S; Pryer, Kathleen M.
Afiliação
  • Li FW; Boyce Thompson Institute, Ithaca, NY, USA. fl329@cornell.edu.
  • Brouwer P; Plant Biology Section, Cornell University, Ithaca, NY, USA. fl329@cornell.edu.
  • Carretero-Paulet L; Molecular Plant Physiology Department, Utrecht University, Utrecht, the Netherlands.
  • Cheng S; Bioinformatics Institute Ghent and Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
  • de Vries J; VIB Center for Plant Systems Biology, Ghent, Belgium.
  • Delaux PM; BGI-Shenzhen, Beishan Industrial Zone, Shenzhen, China.
  • Eily A; Department of Biochemistry and Molecular Biology, Dalhousie University, Halifax, Nova Scotia, Canada.
  • Koppers N; Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet Tolosan, France.
  • Kuo LY; Department of Biology, Duke University, Durham, NC, USA.
  • Li Z; Department of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University Düsseldorf, Dusseldorf, Germany.
  • Simenc M; Boyce Thompson Institute, Ithaca, NY, USA.
  • Small I; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA.
  • Wafula E; Department of Biological Science, California State University, Fullerton, CA, USA.
  • Angarita S; ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, Western Australia, Australia.
  • Barker MS; Department of Biology, Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, PA, USA.
  • Bräutigam A; Department of Biological Science, California State University, Fullerton, CA, USA.
  • dePamphilis C; Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ, USA.
  • Gould S; Faculty of Biology, Bielefeld University, Bielefeld, Germany.
  • Hosmani PS; Department of Biology, Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, PA, USA.
  • Huang YM; Institute for Molecular Evolution, Heinrich Heine University Düsseldorf, Dusseldorf, Germany.
  • Huettel B; Boyce Thompson Institute, Ithaca, NY, USA.
  • Kato Y; Taiwan Forestry Research Institute, Taipei, Taiwan.
  • Liu X; Max Planck Genome Centre Cologne, Max Planck Institute for Plant Breeding, Cologne, Germany.
  • Maere S; Institute for Sustainable Agro-ecosystem Services, University of Tokyo, Tokyo, Japan.
  • McDowell R; BGI-Shenzhen, Beishan Industrial Zone, Shenzhen, China.
  • Mueller LA; Bioinformatics Institute Ghent and Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
  • Nierop KGJ; VIB Center for Plant Systems Biology, Ghent, Belgium.
  • Rensing SA; ARC Centre of Excellence in Plant Energy Biology, School of Molecular Sciences, The University of Western Australia, Crawley, Western Australia, Australia.
  • Robison T; Boyce Thompson Institute, Ithaca, NY, USA.
  • Rothfels CJ; Geolab, Faculty of Geosciences, Utrecht University, Utrecht, the Netherlands.
  • Sigel EM; Faculty of Biology, University of Marburg, Marburg, Germany.
  • Song Y; Department of Biology, Utah State University, Logan, UT, USA.
  • Timilsena PR; University Herbarium and Department of Integrative Biology, University of California, Berkeley, CA, USA.
  • Van de Peer Y; Department of Biology, University of Louisiana, Lafayette, LA, USA.
  • Wang H; BGI-Shenzhen, Beishan Industrial Zone, Shenzhen, China.
  • Wilhelmsson PKI; Department of Biology, Huck Institutes of the Life Sciences, Pennsylvania State University, University Park, PA, USA.
  • Wolf PG; Bioinformatics Institute Ghent and Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
  • Xu X; VIB Center for Plant Systems Biology, Ghent, Belgium.
  • Der JP; Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Pretoria, South Africa.
  • Schluepmann H; BGI-Shenzhen, Beishan Industrial Zone, Shenzhen, China.
  • Wong GK; Faculty of Biology, University of Marburg, Marburg, Germany.
  • Pryer KM; Department of Biology, Utah State University, Logan, UT, USA.
Nat Plants ; 4(7): 460-472, 2018 07.
Article em En | MEDLINE | ID: mdl-29967517
Ferns are the closest sister group to all seed plants, yet little is known about their genomes other than that they are generally colossal. Here, we report on the genomes of Azolla filiculoides and Salvinia cucullata (Salviniales) and present evidence for episodic whole-genome duplication in ferns-one at the base of 'core leptosporangiates' and one specific to Azolla. One fern-specific gene that we identified, recently shown to confer high insect resistance, seems to have been derived from bacteria through horizontal gene transfer. Azolla coexists in a unique symbiosis with N2-fixing cyanobacteria, and we demonstrate a clear pattern of cospeciation between the two partners. Furthermore, the Azolla genome lacks genes that are common to arbuscular mycorrhizal and root nodule symbioses, and we identify several putative transporter genes specific to Azolla-cyanobacterial symbiosis. These genomic resources will help in exploring the biotechnological potential of Azolla and address fundamental questions in the evolution of plant life.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Simbiose / Cianobactérias / Genoma de Planta / Gleiquênias / Evolução Biológica Idioma: En Ano de publicação: 2018 Tipo de documento: Article
Texto completo
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Simbiose / Cianobactérias / Genoma de Planta / Gleiquênias / Evolução Biológica Idioma: En Ano de publicação: 2018 Tipo de documento: Article