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LncRNA2Target v2.0: a comprehensive database for target genes of lncRNAs in human and mouse.
Cheng, Liang; Wang, Pingping; Tian, Rui; Wang, Song; Guo, Qinghua; Luo, Meng; Zhou, Wenyang; Liu, Guiyou; Jiang, Huijie; Jiang, Qinghua.
Afiliação
  • Cheng L; College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China.
  • Wang P; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
  • Tian R; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
  • Wang S; Department of Radiology, Longhua Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 200032, China.
  • Guo Q; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
  • Luo M; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
  • Zhou W; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
  • Liu G; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
  • Jiang H; Department of Radiology, The Second Affiliated Hospital of Harbin Medical University, Harbin 150086, China.
  • Jiang Q; Center for Bioinformatics, School of Life Science and Technology, Harbin Institute of Technology, Harbin 150001, China.
Nucleic Acids Res ; 47(D1): D140-D144, 2019 01 08.
Article em En | MEDLINE | ID: mdl-30380072
Long non-coding RNAs (lncRNAs) play crucial roles in regulating gene expression, and a growing number of researchers have focused on the identification of target genes of lncRNAs. However, no online repository is available to collect the information on target genes regulated by lncRNAs. To make it convenient for researchers to know what genes are regulated by a lncRNA of interest, we developed a database named lncRNA2Target to provide a comprehensive resource of lncRNA target genes in 2015. To update the database this year, we retrieved all new lncRNA-target relationships from papers published from 1 August 2014 to 30 April 2018 and RNA-seq datasets before and after knockdown or overexpression of a specific lncRNA. LncRNA2Target database v2.0 provides a web interface through which its users can search for the targets of a particular lncRNA or for the lncRNAs that target a particular gene, and is freely accessible at http://123.59.132.21/lncrna2target.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Regulação da Expressão Gênica / Biologia Computacional / Bases de Dados de Ácidos Nucleicos / Interferência de RNA / RNA Longo não Codificante Limite: Animals / Humans Idioma: En Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Regulação da Expressão Gênica / Biologia Computacional / Bases de Dados de Ácidos Nucleicos / Interferência de RNA / RNA Longo não Codificante Limite: Animals / Humans Idioma: En Ano de publicação: 2019 Tipo de documento: Article