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BPG: Seamless, automated and interactive visualization of scientific data.
P'ng, Christine; Green, Jeffrey; Chong, Lauren C; Waggott, Daryl; Prokopec, Stephenie D; Shamsi, Mehrdad; Nguyen, Francis; Mak, Denise Y F; Lam, Felix; Albuquerque, Marco A; Wu, Ying; Jung, Esther H; Starmans, Maud H W; Chan-Seng-Yue, Michelle A; Yao, Cindy Q; Liang, Bianca; Lalonde, Emilie; Haider, Syed; Simone, Nicole A; Sendorek, Dorota; Chu, Kenneth C; Moon, Nathalie C; Fox, Natalie S; Grzadkowski, Michal R; Harding, Nicholas J; Fung, Clement; Murdoch, Amanda R; Houlahan, Kathleen E; Wang, Jianxin; Garcia, David R; de Borja, Richard; Sun, Ren X; Lin, Xihui; Chen, Gregory M; Lu, Aileen; Shiah, Yu-Jia; Zia, Amin; Kearns, Ryan; Boutros, Paul C.
Afiliação
  • P'ng C; Ontario Institute for Cancer Research, Toronto, Canada.
  • Green J; Ontario Institute for Cancer Research, Toronto, Canada.
  • Chong LC; Ontario Institute for Cancer Research, Toronto, Canada.
  • Waggott D; Ontario Institute for Cancer Research, Toronto, Canada.
  • Prokopec SD; Ontario Institute for Cancer Research, Toronto, Canada.
  • Shamsi M; Ontario Institute for Cancer Research, Toronto, Canada.
  • Nguyen F; Ontario Institute for Cancer Research, Toronto, Canada.
  • Mak DYF; Ontario Institute for Cancer Research, Toronto, Canada.
  • Lam F; Ontario Institute for Cancer Research, Toronto, Canada.
  • Albuquerque MA; Ontario Institute for Cancer Research, Toronto, Canada.
  • Wu Y; Ontario Institute for Cancer Research, Toronto, Canada.
  • Jung EH; Ontario Institute for Cancer Research, Toronto, Canada.
  • Starmans MHW; Ontario Institute for Cancer Research, Toronto, Canada.
  • Chan-Seng-Yue MA; Ontario Institute for Cancer Research, Toronto, Canada.
  • Yao CQ; Ontario Institute for Cancer Research, Toronto, Canada.
  • Liang B; Department of Medical Biophysics, University of Toronto, Toronto, Canada.
  • Lalonde E; Ontario Institute for Cancer Research, Toronto, Canada.
  • Haider S; Ontario Institute for Cancer Research, Toronto, Canada.
  • Simone NA; Department of Medical Biophysics, University of Toronto, Toronto, Canada.
  • Sendorek D; Ontario Institute for Cancer Research, Toronto, Canada.
  • Chu KC; Ontario Institute for Cancer Research, Toronto, Canada.
  • Moon NC; Ontario Institute for Cancer Research, Toronto, Canada.
  • Fox NS; Ontario Institute for Cancer Research, Toronto, Canada.
  • Grzadkowski MR; Ontario Institute for Cancer Research, Toronto, Canada.
  • Harding NJ; Ontario Institute for Cancer Research, Toronto, Canada.
  • Fung C; Department of Medical Biophysics, University of Toronto, Toronto, Canada.
  • Murdoch AR; Ontario Institute for Cancer Research, Toronto, Canada.
  • Houlahan KE; Ontario Institute for Cancer Research, Toronto, Canada.
  • Wang J; Ontario Institute for Cancer Research, Toronto, Canada.
  • Garcia DR; Ontario Institute for Cancer Research, Toronto, Canada.
  • de Borja R; Ontario Institute for Cancer Research, Toronto, Canada.
  • Sun RX; Department of Medical Biophysics, University of Toronto, Toronto, Canada.
  • Lin X; Ontario Institute for Cancer Research, Toronto, Canada.
  • Chen GM; Present address: Center for Computational Research, Buffalo Institute for Genomics and Data Analytics, NYS Center for Excellence in Bioinformatics & Life Science, University at Buffalo, Buffalo, USA.
  • Lu A; Ontario Institute for Cancer Research, Toronto, Canada.
  • Shiah YJ; Ontario Institute for Cancer Research, Toronto, Canada.
  • Zia A; Ontario Institute for Cancer Research, Toronto, Canada.
  • Kearns R; Department of Pharmacology and Toxicology, University of Toronto, Toronto, Canada.
  • Boutros PC; Ontario Institute for Cancer Research, Toronto, Canada.
BMC Bioinformatics ; 20(1): 42, 2019 Jan 21.
Article em En | MEDLINE | ID: mdl-30665349
ABSTRACT

BACKGROUND:

We introduce BPG, a framework for generating publication-quality, highly-customizable plots in the R statistical environment.

RESULTS:

This open-source package includes multiple methods of displaying high-dimensional datasets and facilitates generation of complex multi-panel figures, making it suitable for complex datasets. A web-based interactive tool allows online figure customization, from which R code can be downloaded for integration with computational pipelines.

CONCLUSION:

BPG provides a new approach for linking interactive and scripted data visualization and is available at http//labs.oicr.on.ca/boutros-lab/software/bpg or via CRAN at https//cran.r-project.org/web/packages/BoutrosLab.plotting.general.
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Texto completo: 1 Base de dados: MEDLINE Assunto principal: Treinamento por Simulação / Análise de Dados Limite: Humans Idioma: En Ano de publicação: 2019 Tipo de documento: Article
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Treinamento por Simulação / Análise de Dados Limite: Humans Idioma: En Ano de publicação: 2019 Tipo de documento: Article