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TractaViewer: a genome-wide tool for preliminary assessment of therapeutic target druggability.
Pearson, Neil; Malki, Karim; Evans, David; Vidler, Lewis; Ruble, Cara; Scherschel, James; Eastwood, Brian; Collier, David A.
Afiliação
  • Pearson N; Eli Lilly & Co. Ltd, Erl Wood Manor, Windlesham, UK.
  • Malki K; Eli Lilly & Co. Ltd, Erl Wood Manor, Windlesham, UK.
  • Evans D; Eli Lilly & Co. Ltd, Erl Wood Manor, Windlesham, UK.
  • Vidler L; Eli Lilly & Co. Ltd, Erl Wood Manor, Windlesham, UK.
  • Ruble C; Eli Lilly & Co, Corporate Centre, Indianapolis, IN, USA.
  • Scherschel J; Eli Lilly & Co, Corporate Centre, Indianapolis, IN, USA.
  • Eastwood B; Eli Lilly & Co. Ltd, Erl Wood Manor, Windlesham, UK.
  • Collier DA; Eli Lilly & Co. Ltd, Erl Wood Manor, Windlesham, UK.
Bioinformatics ; 35(21): 4509-4510, 2019 11 01.
Article em En | MEDLINE | ID: mdl-31070721
SUMMARY: We present software to characterize and rank potential therapeutic (drug) targets with data from public databases and present it in a user-friendly format. By understanding potential obstacles to drug development through the gathering and understanding of this information, combined with robust approaches to target validation to generate therapeutic hypotheses, this approach may provide high quality targets, leading the process of drug development to become more efficient and cost-effective. AVAILABILITY AND IMPLEMENTATION: The information we gather on potential targets concerns small-molecule druggability (ligandability), suitability for large-molecule approaches (e.g. antibodies) or new modalities (e.g. antisense oligonucleotides, siRNA or PROTAC), feasibility (availability of resources such as assays and biological knowledge) and potential safety risks (adverse tissue-wise expression, deleterious phenotypes). This information can be termed 'tractability'. We provide visualization tools to understand its components. TractaViewer is available from https://github.com/NeilPearson-Lilly/TractaViewer. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Assuntos

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Software / Genoma Idioma: En Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Base de dados: MEDLINE Assunto principal: Software / Genoma Idioma: En Ano de publicação: 2019 Tipo de documento: Article